Spec007916.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- gata5-a
- Assembly
- GCA_951805265.1
- Location
- OX638205.1:2486158-2519786[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3 6.6e+03 -3.0 0.0 6 15 207 216 206 219 0.78 2 3 7.5e-18 1.5e-14 53.4 2.7 1 34 318 350 318 352 0.97 3 3 3.1e-18 6.2e-15 54.6 5.1 1 35 372 405 372 406 0.98
Sequence Information
- Coding Sequence
- ATGATGGTGCACGTTGAAGGCATCTCCGTGCCTGCATTACCTAGTGGTAGAAAGCTCCAGCGTATTTATTCCAGTGCGGAAGCTGTTATTGGAATAGGTGTAGATGGCAGATACAGCGGGGAAGAACAGTCTTACAGTCCCGCCTCTCATCATGAGGGGGCAGAGCCGTCTCCCCACTCGCGAGCGACGACGCCTCTCGAATGCCTCCCCTACACGACGGAGGCAGAACCGGACAATTACCAGCCGGGGATGCGCTCTGACGGTGAATTTCTACTCTTCAGCAACAACAGTAGAATAGACGAGGTACCAATCGATGAATCGTCAGGTACGGAATACCTTCAATTGGGTACGATTCATACGGTGTCGAACGGTTCCCCAAATGGTAGCGGCAGTTCAGGATCTCCAAGACGAGGGGTGGCATTCACCCACTTGAACTCCCTTCAGTCTAACGAACAACAGAACCACGTAGAAGGGTCCCATCTCACCCAACTGACCAACCACATTAGTTACACGGGAGAGATGGATCCAGGGCTACCCGGcaacCTTTACCCCAGGAGCCCCGCCAACTACTCGGGAACCACAATGCCGTATTACGGGACTGCGTCCCCGGAGTTGTCAACCCAATCGTCGCACCTATGGAACTCAGGTGTGAGCAATGTGGTCTTGGCGGAAGACTACCCGAAAGTGTCCTCTTCTTCGGCGACAACTTTACCTAGTTTCAATCGCTTCCCCAGCTTCCACAGCAGCAATAATTCTCAAAGGAACGCTTCTTACACCGTTCCAAATTCGTCCTCGTACAACGATTGGCATCAATATTCGGAACCTGCAGGATCCATTCCGTACAACCACCTGTTGACGGCCGGAGGTGCCAGGAACCGGCCATTGTCGGCGTCGGCGTCGCTGACAGCAATCGACCCCCGTACAGCCGAGTACTTCACCGAGGGAAGAGAATGCGTGAATTGCGGTGCCATCGACACCCCTCTATGGAGAAGAGATGGCACTGGGCATTACTTGTGCAATGCCTGCGGCCTTTACCATAAGATGAACGGCATGAACCGGCCTTTGGTCAAGCAGCCTCGTAGATTGTCAGCTTCGAGGCGGGTTGGGTTGACTTGCACGAATTGCCATACGAGCACCACGTCGCTGTGGCGAAGAAACACTCTTGGAGAACCAGTCTGCAATGCGTGCGGACTCTACTTCAAACTTCACGGAGTCAATAGGCCGTTAGCTATGAAGAAAGACAGCATTCAGaCTAGAAAACGGAAGCCCAAGGGTAGTAAGGATACTAATGGAACAAGAAGCGCGATAGCGAACGCTTTGGAATCGTCCATCACCAATATTAAAATGGAACAAACATTAGTAAATCCTGTTAAACTGGAACATTCATCAATGGaGAACTACGAGATGAGAGCAGTTGCATCCCTCAACCACTTGCAGCACACCCCGTCCTCAAATTATGTTTACAATAATCAATCGCATCAACGCATGTCGCCTTATACTTCGCAATCATCACAGTTATCCAGTAATTACTATGACATGCTGCAACAAACGAGTCCTAGCCCCCCTTCTACCACATCACCAAGTCCGAATTCTCCCCATAttgtaaataacaacaatattaaAGTAATAATGAACGGCGACCATGACCATAACATGGACAGGCCCACGGTGGTGTCGTTGTCCTCCTAA
- Protein Sequence
- MMVHVEGISVPALPSGRKLQRIYSSAEAVIGIGVDGRYSGEEQSYSPASHHEGAEPSPHSRATTPLECLPYTTEAEPDNYQPGMRSDGEFLLFSNNSRIDEVPIDESSGTEYLQLGTIHTVSNGSPNGSGSSGSPRRGVAFTHLNSLQSNEQQNHVEGSHLTQLTNHISYTGEMDPGLPGNLYPRSPANYSGTTMPYYGTASPELSTQSSHLWNSGVSNVVLAEDYPKVSSSSATTLPSFNRFPSFHSSNNSQRNASYTVPNSSSYNDWHQYSEPAGSIPYNHLLTAGGARNRPLSASASLTAIDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNTLGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGSKDTNGTRSAIANALESSITNIKMEQTLVNPVKLEHSSMENYEMRAVASLNHLQHTPSSNYVYNNQSHQRMSPYTSQSSQLSSNYYDMLQQTSPSPPSTTSPSPNSPHIVNNNNIKVIMNGDHDHNMDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -