Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: RREB1
Assembly: GCA_951805265.1
Location: OX638204.1:7613064-7621146[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.5e-05 0.0024 18.4 0.6 1 23 83 105 83 105 0.98

2 16 0.00046 0.031 14.9 0.5 1 23 118 140 118 140 0.98

3 16 6.1e-05 0.0042 17.6 6.4 1 23 146 168 146 168 0.98

4 16 1.4 96 3.9 0.1 1 9 234 242 234 258 0.79

5 16 0.002 0.14 12.8 1.4 2 23 264 286 264 286 0.97

6 16 0.54 37 5.2 1.2 1 20 332 351 332 353 0.85

7 16 0.073 5 7.9 0.1 1 23 487 509 487 509 0.96

8 16 8.3e-06 0.00057 20.3 0.8 1 23 518 540 518 540 0.99

9 16 0.00085 0.058 14.0 3.1 1 23 546 569 546 569 0.97

10 16 0.0005 0.034 14.7 3.0 1 23 963 986 963 986 0.97

11 16 0.00021 0.015 15.9 0.5 2 23 1206 1227 1205 1227 0.97

12 16 0.13 8.7 7.2 6.3 1 23 1233 1256 1233 1256 0.97

13 16 0.043 3 8.6 1.1 1 20 1284 1304 1284 1305 0.94

14 16 0.33 23 5.9 0.7 1 23 1370 1393 1370 1393 0.93

15 16 0.017 1.2 9.9 0.4 3 23 1440 1460 1438 1460 0.93

16 16 0.0077 0.52 11.0 5.9 1 23 1466 1488 1466 1488 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.5e-05	0.0024	18.4	0.6	1	23	83	105	83	105	0.98
2	16	0.00046	0.031	14.9	0.5	1	23	118	140	118	140	0.98
3	16	6.1e-05	0.0042	17.6	6.4	1	23	146	168	146	168	0.98
4	16	1.4	96	3.9	0.1	1	9	234	242	234	258	0.79
5	16	0.002	0.14	12.8	1.4	2	23	264	286	264	286	0.97
6	16	0.54	37	5.2	1.2	1	20	332	351	332	353	0.85
7	16	0.073	5	7.9	0.1	1	23	487	509	487	509	0.96
8	16	8.3e-06	0.00057	20.3	0.8	1	23	518	540	518	540	0.99
9	16	0.00085	0.058	14.0	3.1	1	23	546	569	546	569	0.97
10	16	0.0005	0.034	14.7	3.0	1	23	963	986	963	986	0.97
11	16	0.00021	0.015	15.9	0.5	2	23	1206	1227	1205	1227	0.97
12	16	0.13	8.7	7.2	6.3	1	23	1233	1256	1233	1256	0.97
13	16	0.043	3	8.6	1.1	1	20	1284	1304	1284	1305	0.94
14	16	0.33	23	5.9	0.7	1	23	1370	1393	1370	1393	0.93
15	16	0.017	1.2	9.9	0.4	3	23	1440	1460	1438	1460	0.93
16	16	0.0077	0.52	11.0	5.9	1	23	1466	1488	1466	1488	0.98

Sequence Information

Coding Sequence: ATGCAAGGCGTCGTCTTCATGCCGCAAAATCCGCAACAGGGCTCGCCGCCGCCAAACAACACTCTAGTTACCGGTTTTACCATGGAGGTGTCTCCAGAACCCAACAACCAGACGACCAAAGAAAAACTGAACCAAAGCGACTCGGGGATCTTCTCCACCACCGAACCCATCGACGTTTCCATCAGGACCACCTCGGAGAACTGCGACACCGACAACCGAAGCGACTGCAGTTCCCCAGAAAGGAAGTTCGTCTGTCCGATTTGCGACACGATGCTGACGTCCCAACACGAGTTCACGTTGCACATCCGAGTCCACAACAACGAATCCGAGATCCACGAAAACGATAAAGGGTTCACCTGCAGGATCTGCTTCAAGGTCCTCAGCTCCAGCTCCAGTTTGGACCGCCACGTTTTGGTGCACAGCGGCGAAAGACCTTTCCATTGCAAATATTGCGGCGACACTTTCACGACGAACGGCAACATGCACCGACACATGAGGACGCACACCCACAAATCGGAGAATTACGAATCGGACGGCAGCGTCGACAGCAACTTGAGCACCAGCTCGAAAAGCATCGaatacaacaacaacaaaatcgaaACGAAATTCAACAACAAGAGGAAGCACGAATCGGTCGATCAACCCAACAAGAAGTTATTGATGGAGAGTTCCAGCGACAACGAGAGCCAGCATCAGTCGTACAAATGTCCGGTTTGCGACCGAACAGATTTCGACTCCATTGTAGTTTTAGAAACGCATTTGGAAGATAACCATCCGGATTATCCGGCCAAGTGCAACCAATGCAACCAAATCTTCCAGAACAACAAACTGTTAACAGTCCACCGGAGCACCGTGCACGAGAACAGCGTGACCAGACACCACGTCATGGGCTTCAAAGATCTCACCTTCGTCGACTTCTCCAGCGAGAAATTCCCCCATATCGCTCGCTACGAATGCGAGAGGAACCTCCACAAAGCCGCTGGAGGGTTGAAGTTCcaatgcaaaaaatgttcaCGCGCCTTCCCCTGTTCCAACTCTCTAGACATCCACGAAAGAGACTGCGTCTCGGAGAGCAACGGTCTGGATTTAAGCAAAGCCGCCCAAATTTCCGACACGGAAATCAGGCGAAGCGAGTTCTTCTCCAGATTGGATCTCCAGGACAACTCTCCGGAGAAGTTCGTGCCGCCGCCACCACTCAACGAAGCTTCGGCCAAACTGAGGCAGCAACTGCTGGCCAAAGCCGTCTCAATGGATTCGACCAAAGATCTGGCGGATATCCAATCGATTATTTCCATGACTTCCAACGGGAGTCTGCTGCAACAGTTGCAGGCGAAGAGCGAGCTGGCGCTTGCCGGCAGCCAGAAGAGTGTTGAGAGTGATGTCGGGAGACAGGAACCGGAAGAGGAATCGCAGGATTTGTTCGCGGTTGAGTTTAGGAAGATGAAACTAAGGGGCGAGTTTCCTTGTCGTCTTTGCACGGCGGTTTTCCCGAACTTGAGGGCGCTCAAGGGCCACAACCGCGCCCACCTCAACGGAAACAACAACGGAATGTACCGTTGCAACATGTGTCCGCATTCTTCCATCGACAAAGCCGCCCTGATCCGCCACATGCGCACCCACAACGGCGATCGTCCCTACGAATGTTCTCTTTGCAATTACGCCTTCACCACCAAAGCCAACTGCGAAAGACACTTGAGGAATCGTCATGCCAAAACAACCCGCGAAGAGGTGAAAAAGTCGATCATCTACCACCCGTCGGAGGACCCGACCAATGAGGATTTGAACAAGTTAACGTCAAGAGAAGAAGGGAGGAAGATGAATTTGAACTCTTCCAACGACAGCGATTTGAGTCCGGAGAAGTTGAGGTGTGTGACACCAAAACTTTCCGAATTGCGCGGGATGATTCCGGAAATCGCCAAAGCCGAAATGGCGCCGCTAATTCCGAATTTGCTGAAGGAAACGCTGAGCGTGCCTCTCGTTAAAGAACCTCCGAAAGTTTTCCCGAATATCAACGACATTATCCGCAACGAAAATCTCAAATCTCTGAAGGATCACAACATGCACAACGGACCATTGTCGCCGTATTTGCACCACCAGTACAACTTTTCCCCGAAGATCGCCAACGTTTCGACCCCTCACAACCTGACTTCCAAAATTCAAGTCAAAAGTTTGGACGTGTTGAAGGAAAACAGTTACGACAACCAATCAGATTCAGAAGGTAACGACCAGGAGGACGAACCGATGGATCTCGTTCTAGACCTGAGCAAGAAGAAGGTGGTGGAGGAGAAGAAGGCCGAGAATTTGCCTCAGGATTTAACGAAGAAATCGCCGCCATCTCCGGTTAACCACCAGTTGAACATGAGCGAGATTTTTGCGCAGCAATTGCTCAAAACTCCCCCCAAAATCGATCCGGCCGCTCTTTACGCCACTCAGTTGGCCTTGGCGAGGAACACTTTTCCAGGGTTCCCCAACTGGCCGAGTTTTCCCATCAACCCGCTCCTGTACCAAAGTCTCCAAACTCCGATGCTGCCGCAAGAGATCAAGGAGAGAATTCAACGGTTCCAAATGGGGGGTGGTAATTTGATCGGCGATAACCTCGTGGGGGGGTTGAACAACCTCCACCATTTCCGCAACGGCTCCAGTTTCAACAGTTACAAAATGGGAGAAATTAAGCCTGAATTGAAACCTGATTTTAGTCCTAACAAGAAGAGCGACGACCTCAAACCTTTAAGTTTAAACATTGAGAACAATTTCCACGAAAACAAACTCCACAGTCCTCAACCCAAACAAGACTTGATGCAATCCCCGAATTCGGTCAAGATGGTGATCAAAAATGGCGTTTTGATGCCGAAACAGAAACAGCGACGTTACAGAACCGAACGTCCCTTCACTTGCGAGCATTGCTCGGCCAGATTCACGTTGCGCTCCAACATGGAGCGCCACATCAAACAGCAACATCCCCAATTCTGGTCGCAACGCCAAAGAGGCCATCTGTCCAACCCCGGCCGCAAACCACAAACGCCATCGGTCAAAGCGAGCTTCTGTGATCTCAGCATACCAAATTACGAAGTACCAAAGCAGGATTACGACGATACCAAAGAGCAATTAGAGGACAAGTTGAAGTTCGCTTTGCTGGCCCAACATTTGCGCATCAACGTCGACGTCAAGAAGGAGGACGATGACGACTGCGCTCTTGTTATCGACGAGAACGCGGAAAAGAATGACGTCAAGACTGAGCTCAACAACCAAAGAAACTACGACAATTCCGGCGGAACGTTCGAGAGAAGCAGAATTCTCGAGGAGAAACTCAGGGAGTTGCACGCCAAACAGGTCAAGTCGGAaagcaaaattgccaaaaacgAAGAGAACCAGGATCTGGTGCCGGTCTCCAGGCTGCTGGACAACGCCTCGCAGCAGCAGTTCAAGGAGTACTTCAAGCGGGAGGGGGAGGAGCACGAGGGTGGCGGCGCCAGcgaggaggaagaggaagggCTCATTGCCAGCGGCAGCACGAGCGAAGGAAACGTCTCTGGAACCGATGAGAATAGATCTGAGTCTGAGACGGCTCCGCCGGCCAAGAAGAAGTCCGCTTACTCGATGGCCCCGAACCGCGTCAGTTGTCCGTTCTGCAACCGGAAGTTCCCTTGGAGTTCCTCTTTGCGGCGCCACATCCTCACCCACACCGGCCAGAAGCCGTTCAAGTGCAGTCACTGTCCGTTGCTCTTCACCACCAAGTCGAATTGCGACCGTCATTTGTTGCGCAAACACGGCAATTCCGCCACGACAATCAGCAACGAAGTGTCCACCAACAGCACCAACTATCTGATGAGAAACGTCCCCGAAAGACCGTTCAAATGTTCGAGTTGTCCGAGCAGCACGTTCTCGACGTACTCGAACTTGAAGAAGCACATCAGCTGCAAACATTCCACCAACGCCCAGGGGGACGATATCAAAGCTCAAGGTTACGAGGCTGGCAGTTCCGAGGACGAGAAAGTGCCCAGCAGCGACACCAAGAGCGAGTGGGAGCACCAAATCACCCACAAGCCCGGAAATGAACCATCGACGGTGCTGTCGTTGGGGGCTTCAGTACAAAATTCCGATTTGCCATTCAAATGCCATTTGTGCGACGGTTCGTTCGGCGAGCGTCAAGAGGCTCTTGATCACATTAAAGAGAAGCATTTTTCTGAATACGATCTGTTGATGTCGAAGAACGCTCTGGACAGTAGCGCGACCACTCCCGAAGAGGCCGCCCATCACGAAGACGAAGAGAACGACATGCGGGGCAAGTTTCCCGATTATTCCAATCGCAAAGTGATATGTGCGTTCTGCATGCGCCGATTTTGGTCGGCGGAAGATTTGAGAAGACACATGCGCACCCACACTGGCGAACGGCCTTTCAGCTGTGATATTTGCAGGAGGAGATTCACGCTGAAGCACAGCATGTTGAGGCATAGAAAGAAGCATAATGTCAATTTCGATAGTGAGAACGTCAATAGCGATGAAGACGTTAACGCTCCTCCTGCTAGTTTTGAAAAGTTCACCAAAGGCGACAACAATAACCAAAAACCCGGAGAAAAAACCGAAGAGTCTGACGGTAATGAAGGGAGCGATTTGATCAGCAACTTGTTGGGCATCCGGGATAGATCTTTTATTGATAAAGTGCTGACGGCGTCGGCTGATGACGCCGCCAAGCTTTTAGGGGTTAAGAACGGGGTAAAAGAGTAA
Protein Sequence: MQGVVFMPQNPQQGSPPPNNTLVTGFTMEVSPEPNNQTTKEKLNQSDSGIFSTTEPIDVSIRTTSENCDTDNRSDCSSPERKFVCPICDTMLTSQHEFTLHIRVHNNESEIHENDKGFTCRICFKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHTHKSENYESDGSVDSNLSTSSKSIEYNNNKIETKFNNKRKHESVDQPNKKLLMESSSDNESQHQSYKCPVCDRTDFDSIVVLETHLEDNHPDYPAKCNQCNQIFQNNKLLTVHRSTVHENSVTRHHVMGFKDLTFVDFSSEKFPHIARYECERNLHKAAGGLKFQCKKCSRAFPCSNSLDIHERDCVSESNGLDLSKAAQISDTEIRRSEFFSRLDLQDNSPEKFVPPPPLNEASAKLRQQLLAKAVSMDSTKDLADIQSIISMTSNGSLLQQLQAKSELALAGSQKSVESDVGRQEPEEESQDLFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNEDLNKLTSREEGRKMNLNSSNDSDLSPEKLRCVTPKLSELRGMIPEIAKAEMAPLIPNLLKETLSVPLVKEPPKVFPNINDIIRNENLKSLKDHNMHNGPLSPYLHHQYNFSPKIANVSTPHNLTSKIQVKSLDVLKENSYDNQSDSEGNDQEDEPMDLVLDLSKKKVVEEKKAENLPQDLTKKSPPSPVNHQLNMSEIFAQQLLKTPPKIDPAALYATQLALARNTFPGFPNWPSFPINPLLYQSLQTPMLPQEIKERIQRFQMGGGNLIGDNLVGGLNNLHHFRNGSSFNSYKMGEIKPELKPDFSPNKKSDDLKPLSLNIENNFHENKLHSPQPKQDLMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGHLSNPGRKPQTPSVKASFCDLSIPNYEVPKQDYDDTKEQLEDKLKFALLAQHLRINVDVKKEDDDDCALVIDENAEKNDVKTELNNQRNYDNSGGTFERSRILEEKLRELHAKQVKSESKIAKNEENQDLVPVSRLLDNASQQQFKEYFKREGEEHEGGGASEEEEEGLIASGSTSEGNVSGTDENRSESETAPPAKKKSAYSMAPNRVSCPFCNRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNEVSTNSTNYLMRNVPERPFKCSSCPSSTFSTYSNLKKHISCKHSTNAQGDDIKAQGYEAGSSEDEKVPSSDTKSEWEHQITHKPGNEPSTVLSLGASVQNSDLPFKCHLCDGSFGERQEALDHIKEKHFSEYDLLMSKNALDSSATTPEEAAHHEDEENDMRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFDSENVNSDEDVNAPPASFEKFTKGDNNNQKPGEKTEESDGNEGSDLISNLLGIRDRSFIDKVLTASADDAAKLLGVKNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01283679;
90% Identity: iTF_01283679;
80% Identity: -