Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: -
Assembly: GCA_951805265.1
Location: OX638207.1:7602881-7609064[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00034 0.023 15.3 1.8 1 23 92 114 92 114 0.97

2 25 0.00035 0.024 15.2 0.1 1 23 120 142 120 142 0.98

3 25 0.0014 0.094 13.4 0.4 2 23 148 169 148 169 0.96

4 25 1.4e-05 0.00093 19.7 0.3 1 23 175 197 175 197 0.99

5 25 0.0083 0.57 10.9 1.3 3 23 208 228 206 228 0.94

6 25 0.00086 0.059 14.0 1.4 1 23 252 274 252 274 0.97

7 25 1.7e-05 0.0011 19.4 1.6 1 23 280 302 280 302 0.98

8 25 0.0026 0.18 12.5 2.2 1 23 308 331 308 331 0.95

9 25 0.016 1.1 10.0 0.4 2 23 341 363 340 363 0.96

10 25 3.3e-07 2.2e-05 24.7 0.6 1 23 449 471 449 471 0.98

11 25 0.00049 0.034 14.8 1.1 1 23 478 500 478 500 0.97

12 25 0.0018 0.13 13.0 0.2 1 23 506 528 506 528 0.98

13 25 0.042 2.8 8.7 3.1 1 23 539 561 539 561 0.98

14 25 3.5e-05 0.0024 18.4 1.0 1 23 599 621 599 621 0.97

15 25 0.38 26 5.7 5.1 1 19 627 645 627 649 0.90

16 25 2.3e-05 0.0016 18.9 0.8 1 23 655 677 655 677 0.97

17 25 0.00082 0.056 14.1 2.1 1 23 683 705 683 705 0.98

18 25 9.9e-05 0.0068 17.0 1.5 1 23 993 1015 993 1015 0.98

19 25 4.9e-06 0.00034 21.1 0.9 2 23 1025 1046 1025 1046 0.98

20 25 1.8e-06 0.00012 22.4 2.5 1 23 1052 1074 1052 1074 0.98

21 25 0.002 0.14 12.8 3.0 1 23 1082 1104 1082 1104 0.96

22 25 0.18 12 6.7 7.3 1 23 1110 1132 1110 1133 0.94

23 25 0.001 0.071 13.7 5.4 1 23 1270 1292 1270 1292 0.97

24 25 0.00019 0.013 16.1 0.1 1 23 1298 1320 1298 1320 0.97

25 25 0.0029 0.2 12.3 0.3 1 23 1326 1349 1326 1349 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00034	0.023	15.3	1.8	1	23	92	114	92	114	0.97
2	25	0.00035	0.024	15.2	0.1	1	23	120	142	120	142	0.98
3	25	0.0014	0.094	13.4	0.4	2	23	148	169	148	169	0.96
4	25	1.4e-05	0.00093	19.7	0.3	1	23	175	197	175	197	0.99
5	25	0.0083	0.57	10.9	1.3	3	23	208	228	206	228	0.94
6	25	0.00086	0.059	14.0	1.4	1	23	252	274	252	274	0.97
7	25	1.7e-05	0.0011	19.4	1.6	1	23	280	302	280	302	0.98
8	25	0.0026	0.18	12.5	2.2	1	23	308	331	308	331	0.95
9	25	0.016	1.1	10.0	0.4	2	23	341	363	340	363	0.96
10	25	3.3e-07	2.2e-05	24.7	0.6	1	23	449	471	449	471	0.98
11	25	0.00049	0.034	14.8	1.1	1	23	478	500	478	500	0.97
12	25	0.0018	0.13	13.0	0.2	1	23	506	528	506	528	0.98
13	25	0.042	2.8	8.7	3.1	1	23	539	561	539	561	0.98
14	25	3.5e-05	0.0024	18.4	1.0	1	23	599	621	599	621	0.97
15	25	0.38	26	5.7	5.1	1	19	627	645	627	649	0.90
16	25	2.3e-05	0.0016	18.9	0.8	1	23	655	677	655	677	0.97
17	25	0.00082	0.056	14.1	2.1	1	23	683	705	683	705	0.98
18	25	9.9e-05	0.0068	17.0	1.5	1	23	993	1015	993	1015	0.98
19	25	4.9e-06	0.00034	21.1	0.9	2	23	1025	1046	1025	1046	0.98
20	25	1.8e-06	0.00012	22.4	2.5	1	23	1052	1074	1052	1074	0.98
21	25	0.002	0.14	12.8	3.0	1	23	1082	1104	1082	1104	0.96
22	25	0.18	12	6.7	7.3	1	23	1110	1132	1110	1133	0.94
23	25	0.001	0.071	13.7	5.4	1	23	1270	1292	1270	1292	0.97
24	25	0.00019	0.013	16.1	0.1	1	23	1298	1320	1298	1320	0.97
25	25	0.0029	0.2	12.3	0.3	1	23	1326	1349	1326	1349	0.97

Sequence Information

Coding Sequence: ATGTCCGAAAGTGGTGTAAACAACGACGCCGTTTCCACTTTCGTCGTTTCGCCCGTGGACAACACTGAAGGCAACCTGATTCAAATTCCGGAACAATTTCACATAATCAAGaatgttattattaagtcCTTGTCTGATGGCTCTTTATACATCATGGAAGCTAACGACTTCCACATCAATCAAGAACCTCCAGCTGCTCCTCCAGAGATTGAAACCGCCCCGGCCATTTTGGACCCTCCAGCAACCTCGCCAAAGCCATCTGAAAAACCCACATACAATTGCTCAACATGCGAAcaagtttttgataaaaagaCACTGTTTCGCAAACACATGATGTGGCACaggaatgtaaaaaaatttaaatgtgacAAATGCTCTGCTGGGTACAATGTTGAAAGTAATTTGAAAGTTCACATGGCGGTGCATGCCGAAGGCAAGCCGACTTGCCCCAATTGCAGTATATCGTTTCAGCGGTTAGCTAGTCTCAAATCACATTTGTTGCTGCATCAAGTTGAGGAATTTTACACCTGTGAGGAGTGCAAAGCGGAATTTGACAGAGAAGAAGAATTAAATAGGCATTTACGGAGCCATTtgaatattaaagaaaataaagaaatgattTGCTCATATTGCAAGGTTAAGTTCGAGGATTCAGTTAATTTCAAGCAGCATGTCGCTCACCATAGAAAGGTCAAGAAATTAGTGCTTTCTGGGAAAAAAACGAGGAAAACTTGCGGCAGCAGAAAGTATCCGCATGTATGTGGAGTGTGTTTGAAGAGCTTTCGAAAATTGTCCTTGCTGGATCGCCATTCGAGGGTTCACAGTGGGGAAAGGCCGTTTGTTTGCCAATACTGTAAGCGGGGCTTTAACCAAAAGGGCACTTTGAAAATTCACTTGAATAGACACTCGGGATTCAAGCCGTTCCATTGTACTCTTTGCACggcaaaattttaccaaaaaggTAACTTGAGGGTCCACGTCGCAAAGACTCACATGGCCCCTACGGGCGTGAAAACCGTCAAATGTCCCTATTGCACTtgcatttttacaaaaatcggCCCTCTCAACGTTCACATAACGAGAGTCCACGATCCCGATCAAAATTTAGAGGATGTCGTCAACAAACTGAAAGAGTTGGAACAACAAACGGCCGCAATAACGCCCGAAATGAAGCCGGCCGCAAAGGAGATTGtagagcaaaataaaaaaattctggaagAACTGAAAAGCGACGGATTAGAGGAGTCGACTGACGTTGGGCATATTAGATTCGCCGGATCGGTTCTGGACGGTTCCATGACGAGCTACTTGGTTAAACAGAGGAAGGTCAACGATTGTCGTACCTACATTTGCAACGACTGCAACAAAGAGTTTAAAAAGGCCTCAGATCTGATCAGACACACGCGGGTTCATACTAGAGGAGAAAGGCCGTTTGCCTGTAGACAGTGCAGCGCCTCCTTTTCTTCGAAAGCGACACTTTTCAACCATTTGACAACACATTGCAACGGTAAGAATTACGTTTGCAACATTTGCTGGAAAATTCTAAGTACACATGAGGCTTGGGAGGCACATCTTaaGAACCACGCTTCGAGAGAGAGTAAAGTGCATAAGGTGTATAAGTGCAACGTTTGCAATGACTCCTTCCACAGCACCTACAAGTTACGAATACACAAAGAGGTCCATAAGGCGTCGAACGGTGGTAGCACCATCGAAATGCGGGAGCCTCTAATGCAAACCCCGACCGGTCTCTTGCCGGTTTCGAAACCGGAAAATTCAGCGGCATCTCTCCGGCAATTTTCCTGTCAAACTTGCAACGCGAAATTCGGAAAAGCGAGCAATTTAAAACGACACATGCTCCTTCACGGCGCAGAACGCAAATACAAATGCGAACATTGTCCCAAATCGTATTTATCGGCGCACGCGTTAAGGGAGCATTGCTTGTACCATTCCGGAACCAGGAATTATTCCTGCAAAACTTGCGGGAAGAAATACGTGACGTTGGCGCTGTTGAAACGGCATTTAGTCAGTCATAATAGTTCGCGCCCGTACGTTTGTCCTTACTGCAGCAAGGCCTTCAAGAGTCTCATGTTGTGCAAGAAACACATCAATATTCACAAAAAAGAGATTAGTTCAGAAATCCGAAATGCTAAAGCTAATGAAGAATTGGATAGGGCAAAATTGATCGAGGAGTCCAATGCTGTCGCTGGAGCAGGCAGCGATCCTCTAGTGGGGCAGAAAGTCGAGGTGAAGCAGGGTAAATTTGCGCAAGAAAAGAGCGacgattttattttgcaacagGCCCAACATCTCGACCAATCAGGGATCATGCAGCAAGTTGGCgACGCTATCGACCACCCTATAGATCAGCAATTGTTCCAAATGCCATCAGGCTCCGTACAAATATTGCCTAACAAGCCGGAACTGCAGGACACCAGCCAGGTCCAGACAATTTTCATCAACTACGACGAGTTGCAGCTGACCGATGGTGCCGATTTGTGCAACACTTTAAGCTCCAATTCCAAAATTGAGGCGTCCGATTCGCTGTTCTTCAACACCCTCAGCGACCTTCCAGACCCCAACGTTTTCAACATCGACCAGTTAACGGGCGAATTCGACACGCAAGCTGAAACCTACAACAACACCGATCAAACCACAATCACCATCAACGATTTAGCGAAAATTCTCAAAATCCACAAAGATAAACCCGACCAACTCATCACCGACGATAACTTTTTAAGCAACACCTCTTTCTATTCGAACCCCGAACTAAATTTATCCCTCAACATCGCTCCTAGCGACAATTTCCCTTCAGTCAACGCAATTCCTTCACCTACGATTTTGCCTAATTTGCCCCCGGACTCCGCTCCTCTTGccgttttcaatttagaacagGACCTTTTGAACTTAACCAATGAACCTTTAACGGAAATTGCTCCTAATAGTAACACCGAAACCGTCACGAAATCCAGGATGAAATTCACTTGCGCGCAATGCAGGCGGGTTTTTACCAACAAAAGCACTTACGCGAGGCACGTGGAAAGACACGCCAATAAGGGTGAACAAATATTGCGACAGTGCGATTTTTGCGCGAAAGCCTTCAAGAAACAGTCGGATCTGGTGAGACATATACGCACGCATACTGGGGAGAAACCTTTTCCGTGTAATAAGTGTGATAAGAAGTTTTCGCTCAAGTCCACCCTGTTGTCGCATCAGCGGACGCACAATCCTGTTGGCCAGAAACGACACAATTGCGTGGTTTGCAACTCGTTCTTTACCTTCAAATCCAGCCTGAACGTTCACATGAAACTTCACACCGGAGTGAGACCCCACGAATGCTCGTTTTGTCCAATGAAGTTCCGGACGGCCTCTCACAAGAAATCTCACGAATCCAGCCATCATCTCAACGCGAGGAAGGGTCCGAGTAAGTCGAGCAAAGTGACCTCTATGCTGGCATCGGTGGCGATGGAAACGCTTCAACCCCCGCCACCTTCTACCGAAGACCTCAACAACGTTGTAATAGTACAAGAACAACTGCAACTTCCCAGTGACGATTTGAACATTCTCAACGAACCCCACAATTCTTTAAGTGACACCATCCAATTAGACCCGATGATCTTGCAACAGTTGCAATCGTCTCATTTTTTGCTCCAAGACCAACTGATACCGTCGTCACTAATTCAGTTGGATGACGGCACTTTGCTCAATATCAAAACCGTCAATAACGATCTGAATTTGGTGGTGGACAACGGCGTTGATAATTTGCCGAGTAACGTTGACGTGCAGAGTATTAAACCGAAACCGAGAAATCACGAATGCGATATTTGCCATAAAAAATACGCTTCCAAAGACGTGCTGAGGAAACACAAAAAGAGACATGGGATCAACCGAAAGTTTCCTTGTAGCAAATGCGATAAAGGGTTCGATACTGAGGAAGCTCTCGACAAACACGAGAAGGTCCATGAGGGTTATCGGCCGTTTTCTTGTTTGTACTGCAACAATAGTTTTGCGAAAGAACAAAGTCTGGCTGCTCACGTGAAGAGGATCCACCAAACGGCGATTAAAGAAGACTTCTTACTGTTCGACTTGAAATGA
Protein Sequence: MSESGVNNDAVSTFVVSPVDNTEGNLIQIPEQFHIIKNVIIKSLSDGSLYIMEANDFHINQEPPAAPPEIETAPAILDPPATSPKPSEKPTYNCSTCEQVFDKKTLFRKHMMWHRNVKKFKCDKCSAGYNVESNLKVHMAVHAEGKPTCPNCSISFQRLASLKSHLLLHQVEEFYTCEECKAEFDREEELNRHLRSHLNIKENKEMICSYCKVKFEDSVNFKQHVAHHRKVKKLVLSGKKTRKTCGSRKYPHVCGVCLKSFRKLSLLDRHSRVHSGERPFVCQYCKRGFNQKGTLKIHLNRHSGFKPFHCTLCTAKFYQKGNLRVHVAKTHMAPTGVKTVKCPYCTCIFTKIGPLNVHITRVHDPDQNLEDVVNKLKELEQQTAAITPEMKPAAKEIVEQNKKILEELKSDGLEESTDVGHIRFAGSVLDGSMTSYLVKQRKVNDCRTYICNDCNKEFKKASDLIRHTRVHTRGERPFACRQCSASFSSKATLFNHLTTHCNGKNYVCNICWKILSTHEAWEAHLKNHASRESKVHKVYKCNVCNDSFHSTYKLRIHKEVHKASNGGSTIEMREPLMQTPTGLLPVSKPENSAASLRQFSCQTCNAKFGKASNLKRHMLLHGAERKYKCEHCPKSYLSAHALREHCLYHSGTRNYSCKTCGKKYVTLALLKRHLVSHNSSRPYVCPYCSKAFKSLMLCKKHINIHKKEISSEIRNAKANEELDRAKLIEESNAVAGAGSDPLVGQKVEVKQGKFAQEKSDDFILQQAQHLDQSGIMQQVGDAIDHPIDQQLFQMPSGSVQILPNKPELQDTSQVQTIFINYDELQLTDGADLCNTLSSNSKIEASDSLFFNTLSDLPDPNVFNIDQLTGEFDTQAETYNNTDQTTITINDLAKILKIHKDKPDQLITDDNFLSNTSFYSNPELNLSLNIAPSDNFPSVNAIPSPTILPNLPPDSAPLAVFNLEQDLLNLTNEPLTEIAPNSNTETVTKSRMKFTCAQCRRVFTNKSTYARHVERHANKGEQILRQCDFCAKAFKKQSDLVRHIRTHTGEKPFPCNKCDKKFSLKSTLLSHQRTHNPVGQKRHNCVVCNSFFTFKSSLNVHMKLHTGVRPHECSFCPMKFRTASHKKSHESSHHLNARKGPSKSSKVTSMLASVAMETLQPPPPSTEDLNNVVIVQEQLQLPSDDLNILNEPHNSLSDTIQLDPMILQQLQSSHFLLQDQLIPSSLIQLDDGTLLNIKTVNNDLNLVVDNGVDNLPSNVDVQSIKPKPRNHECDICHKKYASKDVLRKHKKRHGINRKFPCSKCDKGFDTEEALDKHEKVHEGYRPFSCLYCNNSFAKEQSLAAHVKRIHQTAIKEDFLLFDLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01283597;
90% Identity: -
80% Identity: -