Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: gl_1
Assembly: GCA_951805265.1
Location: OX638207.1:5179941-5181846[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.5e-06 0.0058 16.8 0.3 15 41 260 283 252 285 0.87

2 5 0.014 54 4.0 0.2 18 41 291 311 286 313 0.83

3 5 0.0052 21 5.4 0.7 6 38 308 340 303 340 0.80

4 5 3.6e-05 0.14 12.3 0.7 18 40 347 366 343 369 0.89

5 5 0.0091 36 4.6 2.0 17 40 374 394 367 402 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.5e-06	0.0058	16.8	0.3	15	41	260	283	252	285	0.87
2	5	0.014	54	4.0	0.2	18	41	291	311	286	313	0.83
3	5	0.0052	21	5.4	0.7	6	38	308	340	303	340	0.80
4	5	3.6e-05	0.14	12.3	0.7	18	40	347	366	343	369	0.89
5	5	0.0091	36	4.6	2.0	17	40	374	394	367	402	0.84

Sequence Information

Coding Sequence: ATGGATGCTACTTACGTCCCCAACAACCCTCAGTTTGGTTTGCAACTCGAGTGCAACTGGAGCTCTGGTCCAAACTCCGGCAACCAGCAGCTCCCACCTTGCACCACCGACGACTTATCATCCTGCTGGAGCGAAGACATGGCCTCATTCTCACTACCTCTCGACTTAGAACCGTTACCGAGTCTCTTCCCATTTTCACCCTGCAGCAATCCAGGCAATAACTACAATAAaacagACTCGACAATTCAAAACCAAGCAACTCAATATATGTTTCGAGAAGCTAAACCTACATCTGACATGGCCGACGTTCTTCTTTCTCTCAAACACGCCGTAGTTCATCCTGACCAGAGTCCCTCCGAAAAGTACGACCCACAACAACACCTCTACCACCCTCAAGTTCTACTTTCGCCCAACGGCTACACCAACAGTTTATGCGACCAAAATTTCCCCCAACAAACACCCCTGTTTCCATCGATGTCCGTGAACGTCTCCATGAACATGACCATGCACGGCTACCATCCCACCAGCAGTTATCCGACGACAGAAATTTCTTATCCGCAGATGCAATGGAACGCGGCGGCTCAAGGAGCCTCTCCGGGGACTTACCAGACGCAAGGACTCCTGAGTCCTTCGTATGGAGGCACAACCTACTCGTTCACGGCGGATTTCAGGCCGCCCCAAGAAGCGCCTCTGATCACGTCGTACAAGCCGGTGCCGATGGCCTTCTCCTCGCCCAGGAGAAGGCACAGCATCAATCTCATGGAGGAGGAGAACCAGAAGCCCAACGTCTGCCGAATATGCGGAAAGAGCTACGCTCGCCCCAGCACCCTGAAAACCCACTTGCGCACGCACTCCGGAGAGAAGCCCTATCGCTGCATCGACTGCAACAAGTCGTTTTCGCAGGCAGCCAATCTGACGGCTCACGTCCGCACCCATTCCGGGGAAAAACCTTTCCGTTGTCCGGTGTGCGACAGACGCTTTTCCCAAAGCTCCTCGGTGACGACGCACATGCGCACTCATTCCGGCGAACGACCCTACCGTTGCAGACTGTGCAAGAAAGCCTTTTCCGACAGCAGCACCCTTACCAAACATCTCAGGATACACAGCGGCGAAAAGCCGTACGAGTGCAAACTGTGCATGTTGAGGTTTAGTCAGAGCGGCAACCTGAACAGGCACATGAGGGTGCACGGGACGTTGCACCAGCACGACGCCAATTTGGCGCGGGGCGTCGACGTGTTCGCGGGGAATTGGGGCGGCGACGCCGCACACCTGAAGAAGAGCTGA
Protein Sequence: MDATYVPNNPQFGLQLECNWSSGPNSGNQQLPPCTTDDLSSCWSEDMASFSLPLDLEPLPSLFPFSPCSNPGNNYNKTDSTIQNQATQYMFREAKPTSDMADVLLSLKHAVVHPDQSPSEKYDPQQHLYHPQVLLSPNGYTNSLCDQNFPQQTPLFPSMSVNVSMNMTMHGYHPTSSYPTTEISYPQMQWNAAAQGASPGTYQTQGLLSPSYGGTTYSFTADFRPPQEAPLITSYKPVPMAFSSPRRRHSINLMEEENQKPNVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCMLRFSQSGNLNRHMRVHGTLHQHDANLARGVDVFAGNWGGDAAHLKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00870811;
90% Identity: iTF_01283583;
80% Identity: iTF_01330061;