Spec006624.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- Rho1
- Assembly
- GCA_951805265.1
- Location
- OX638204.1:9558784-9565442[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-08 6.2e-05 23.2 0.0 3 43 480 520 478 522 0.93
Sequence Information
- Coding Sequence
- ATGGCATCAAGAAGAACCAGAATAAAGGGAATCGCCAACATTCCCCAACGCAGGAAACCCACAACAGCCTCTAGCACCGAAGAAGCAGCTGAAATAGCGCCGAAAATAGACCAGAAAGCAGAACCAGTCGAACCTAACCTCACTTCCACAACTGTTATCGCACATGATGACAACCAACAAAAGGTTGCGCAATCTCCTCCAGATATCAACACTAACACCTCCGAAGTTCACCAGGAAGAAGTAGTTGTGGAAGAGGTTCCGAAAGTTGCCGAGCCTCCTCTCCCCAAAAAAGCTGACACCCCTAAAAAAGCCCTCGTTATTCGGCGCAAATTCATTAAGCCAGTAGTGGCAGTTAATTCAATcagtagaaaaaatagggaTGTTAACGAAGGGCAGGTTGCAAAGAAACCTGAAGAAGCGCCACCCATCCCAGAAAAcgacaaaattgttattttggaGGAAGTCATTAAACATGTTAACGATCCTGATTATCTTGTACCTCCTGTGACCTCTAAAAACGACGAAAAAGTTGAGGAAGAAGTTTTAATCAGGCCTCTCGAGTCTGTTGATGTTAACGATCTTGATTGTCCTGTACCTCCCACAACCTCTAAAAACGACGAAAAAGTTGTAGAAGAAGTTTTAATCAAGACTCCCGAGTTTGTTGCTGTACCTAAATCGCATACACTTTCATCAGAGAGGGACGCTAAAAAACCGCCCCCTTCGCCGGTAACAACACATGCCGATGTCGAGTATCCAGTGCCGCCCCCAAGTCCCAGCAAGACGAACCGGTCCAGGATCAAGGCGGTGCCTAGGTTCAGCCAACGTCACGCCAGCTTCAGCGCCAGCGAGTCAGAGGACGAGAGCAAGAGGAACTATAGGCATCGCAACGATTCCGTGTGCTCTGCCACTTCGGGGGTGCAAGATCCGCTGCTTGTCGATTGTCCTTCGCCTCAGAAACCCAAAGAGTTCAACTCCGTGATCCAGCGAAAATGCAGACGAACCGAGCAGTCGCGGAAGCTCGCCGAGGCGAGACgcgatttttatttgaaattcggCAACAAGAAGCCCGATCGTCAAAAGTTGACGATGAtcgacttaattttttacaacccGACCACCAACCAGATGAGTCacgaaaacaaaaagaagGACGGACCGGAAGCCAACGGAGAAGCGGAAACTGTCGATAACAACAACGAGTCCGAAATTGAGGACAATCCCGATGAACCTCCAAAATCCGGGAGCGACGAGGAAAATGAAATGCCGGCGCCTCAGCTAAAAATCGGACCACAAGGCGAGATTGTGGTCGACGAACAGAGTTTGGTGATCGAGAACaaagttaacaagaaaaaatgggAGGAAATGCAAAAACAGAAAGTGGTCACGGGGAATTTGGAGACGGGTTATGGCGTTTACAAGAGAGCGAAACGTTCTAAGGATTGGAGCAAACAGGAGacgttgaaattttataaagcGTTAAACACTATCGGAACGGATTTCACGTTGATGTGCGAATTTTTCCCGAGGAGATCGAGGAGggaattaaaaatgaaatttaagAAAGAGGAAAGGGTCAACAGGAATTTGGTTGATCGCGCCGTTATGGAACCGTGCGGATTCGACTTTAACGAATTCAAACACGAGGTCGATCTTGAGGAGAAAGAGCTGGAGGAGCTCGAGAAGCAGAGGGAGAGGGAGGTACAGGTCAAAAAGGAGAAGAAAAGAAAGTCCCCGCTAACGGGCAAGCAGGAGGTTCCGGCCAAGCAGCCGAAGCTGGCCAGCACCCAAGAGACGAAGAAAAGCGCAAAATCACTCGACATCATGAACGTGTTGGAGGAGAGCGACGCCGACGTTTCAAACGCGGAATTGGAAAAGGACCCGGAAGACTTGATTTTGCAGAACATGCAGAAGCCCACTAGATCGGGAAGGATGCCAAAAATACTGAGACGGCACCAGGCTCCGGCTGCTCGCCGCCCTAAGCAACCTGTCAATACTCAACCGGGATCGTTGACTGTGTCGGAGGAGAGCGACACCGACGTTTCGGACGACGAAGACTTAATTCTGCAGAACATGCAGAAACCTACTAGATCGGGAAGAGTGCCAAGAATACTGAGACGGCACCAGGCTCCGGTTGGGCGGCGCCCTGCAACACCTGAGCAACCTGTCAAAACTAAACCGGGATCGTTGATGGTGGTGGAAAGTACGGGGCCGACCGGTGTACCCGTTTACAATGTTTTTATGGTGACGGGAGAGTCAAATAACGGGAAAGTCGATCAAAATGAAAGCGTCAGTAGTTTGAGTAAAACGGTTCAGTTCCAGGGCAATGAGATGGAAATGCTTTTCCTCATGGCTTCCCCCTCATCCCTAGACAAGAAAAAGGTGGTAGTTATTGGTGATGGAGCTTGCGGAAAGACTTGCCTTTTGATGGTCTACATTACCGGTCAGTTTCCCACCGAGTACATTCCGACAGTTTTCGACAACCATATAAAGGAAATCGACGTCGATGGCACCTCCACTCCAACTTTGCTTATGGACACGTCCGGCCAAGAGGACTACGAGAGACTCAGAACTTTACAGTATCTAGACACTAACGCTTTCATAGTGTGTTTCTCTATAGACAGCAGAACGTCTTTTAACAACGTAAAGTTGTTGTGGATGCCCGAAATCAAACATTTCAAAGTTCCCGTGGTTTTGGTCGGAACTAAATTAGATTTGCGCGGTGTCATCGATAATTCAATCAAGAGGAGTGAAGGAGAAGCTTTggcgaaaaaaattagagcttCGGCTTACATCGAGTGTTCAGCCAAAATCAGCGAAGGCGTCGACAACGTTTTCGAAACTACAACTAGAGTGATGTTGAATCCGAAAGTTTACAAAGGAAGGAACCGTTGCGTTTTGTTTTAG
- Protein Sequence
- MASRRTRIKGIANIPQRRKPTTASSTEEAAEIAPKIDQKAEPVEPNLTSTTVIAHDDNQQKVAQSPPDINTNTSEVHQEEVVVEEVPKVAEPPLPKKADTPKKALVIRRKFIKPVVAVNSISRKNRDVNEGQVAKKPEEAPPIPENDKIVILEEVIKHVNDPDYLVPPVTSKNDEKVEEEVLIRPLESVDVNDLDCPVPPTTSKNDEKVVEEVLIKTPEFVAVPKSHTLSSERDAKKPPPSPVTTHADVEYPVPPPSPSKTNRSRIKAVPRFSQRHASFSASESEDESKRNYRHRNDSVCSATSGVQDPLLVDCPSPQKPKEFNSVIQRKCRRTEQSRKLAEARRDFYLKFGNKKPDRQKLTMIDLIFYNPTTNQMSHENKKKDGPEANGEAETVDNNNESEIEDNPDEPPKSGSDEENEMPAPQLKIGPQGEIVVDEQSLVIENKVNKKKWEEMQKQKVVTGNLETGYGVYKRAKRSKDWSKQETLKFYKALNTIGTDFTLMCEFFPRRSRRELKMKFKKEERVNRNLVDRAVMEPCGFDFNEFKHEVDLEEKELEELEKQREREVQVKKEKKRKSPLTGKQEVPAKQPKLASTQETKKSAKSLDIMNVLEESDADVSNAELEKDPEDLILQNMQKPTRSGRMPKILRRHQAPAARRPKQPVNTQPGSLTVSEESDTDVSDDEDLILQNMQKPTRSGRVPRILRRHQAPVGRRPATPEQPVKTKPGSLMVVESTGPTGVPVYNVFMVTGESNNGKVDQNESVSSLSKTVQFQGNEMEMLFLMASPSSLDKKKVVVIGDGACGKTCLLMVYITGQFPTEYIPTVFDNHIKEIDVDGTSTPTLLMDTSGQEDYERLRTLQYLDTNAFIVCFSIDSRTSFNNVKLLWMPEIKHFKVPVVLVGTKLDLRGVIDNSIKRSEGEALAKKIRASAYIECSAKISEGVDNVFETTTRVMLNPKVYKGRNRCVLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -