Spec007072.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- retn
- Assembly
- GCA_951805265.1
- Location
- OX638204.1:14573649-14583659[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-20 8.8e-17 61.4 0.0 14 89 13 86 2 86 0.92
Sequence Information
- Coding Sequence
- ATGGAAGACCATTTGGACGTTTGTCGCATTTGTCTGCATTTGTCTGGATCCCCGATCAACAGACTGCCCATCATGGCCAAATCTGTACTTGATTTGTACGAGCTGTACAATCTAGTCATCGCCAGAGGTGGACTAGTGGACGTGATTAACAAAAAACTGTGGCAGGAGATCATCAAGGGGCTGCATCTACCGTCTTCCATTACATCAGCTGCGTTCACGCTGAGAACACAGTACATGAAGTACTTGTATCCCTACGAATGCGAAAAGCGCCACATGAGTACACCTGAAGAACTCCAGGTAGCGATCGACGGCAACCGTCGGGAAGGGCGTCGCGCCAGCTACGGATACGACGCCATGCAACGCTCCCCGAATCAGCAGGCTATTTCCTTATCGTTAGCCCAACAACAGCAGCAACAGTTGGCCGCTCGCTGCTTGAACAACATGATCACTATGGGAAGTATGACCAACGGCGTCCATCATCCCAGCCATCCCCAGCCGATGAGTCAACCCCACAACGGAATTCCGGGCATGCCTCCCGATCTGGACGCACGTCTGATGGATTACGTGAAATACGTCAGTACTCATGGCGCACCTACAGCCGCGTCCACCTCGCCTCCAATAAGACTCATGACAGGATCACCACCGGCTACGTCACCCCTGAACCCGCTATGGTCGTTATACAGAAACCCACAACCCCCCGTGGAGCCCCAGCAAGAAGCCCTCAATCTGGCCGACTCCTGCCAGACTTCCTCAAAGAGAGAGTCGGAACCCAGAGAGTCCGCCCAACCCTCCAAGAAGCAGTTCAAGGGCGACCCGGACGAAGACAAACCCCAGCGACACGGCGCCGCCAACATATCCATCACCAACAGAGTTGATGCCCACAACGGAGGCAGCAGTTCCATGCTCGTGTCCATGGACATCAACGGCGTCAAATACAGCGGTTTGCTCTTCGCAAGCTCTTCCAATAACCAAACGTCGCCCGGTAGCACGCACGGTTCCGTGTCTTAA
- Protein Sequence
- MEDHLDVCRICLHLSGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRHMSTPEELQVAIDGNRREGRRASYGYDAMQRSPNQQAISLSLAQQQQQQLAARCLNNMITMGSMTNGVHHPSHPQPMSQPHNGIPGMPPDLDARLMDYVKYVSTHGAPTAASTSPPIRLMTGSPPATSPLNPLWSLYRNPQPPVEPQQEALNLADSCQTSSKRESEPRESAQPSKKQFKGDPDEDKPQRHGAANISITNRVDAHNGGSSSMLVSMDINGVKYSGLLFASSSNNQTSPGSTHGSVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -