Spec002805.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- ARID5B
- Assembly
- GCA_951805265.1
- Location
- OX638202.1:30711421-30719637[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9 1.3e+04 -3.2 0.0 37 52 122 137 122 150 0.85 2 2 1.2e-25 2.6e-22 79.1 0.0 2 89 231 316 230 316 0.94
Sequence Information
- Coding Sequence
- ATGCCTCGTCCTTTGAACGATGATGGTCTTTCGGATGAGGTGTTGGCGATTTCGGAAAAAGTAGTCCTTCGAGTGGAAGATTTAATAACGTGGATCACGGTGGACGCGGAATGGACGTGGGGTAGATTAGCGAAATGCGAACGGGAGGTGAAGGATCCCCCGCCGGACGAAGATACCCAGAACGTAATTGGTTCGCTGGCGGAAAGCTCGCTGGACTTTTCCGACgtagaaagagaaagaaaggCGTCAGactGTTACCCGGAACAAGAAGGACCAACCGTAATAATTCTAAGTTACCCCCGCTACTGCCGCTACAGGGCGATGATGCGACGCTTGGAGGGCCTCGAGGACGAGTTTCTTAAATATAAGATAGTCAGCGCCCTTGGAGGTCTGACGGCCTACACCAACAACACCAGGATCCTTTTCTGCAAGGATACGTTTGACTATCCCGAGTTGGAGGGCCACGAACTGTTGTGCAATCATCTGGCCCCAAAGTTGAAGGGTCGGCCCAGAGGCAAGCGGAAAAAACGGAGCATCTCCCCCGGCTCCGAGAGCAACGAATCAGAATCCTCAATATCCAATGTGTTCAATTCTTCCAAGGAGAAAATTACGGCCGAAGGCGGCCGTAATGGTCTCCGTTGTGATAGCGGCAACTTACGGCGCAGCACGCGCTCCACCGAAAACTCCGAAAGCAAAGAGTTCATCAAGGAATTGACTGTTTTCATGAAAACGAACTACACCCCCATAGGTCGCATCCCCTCTTTGGGCTACAAAGAACTCGATCTTCACTCGTTCTACACCAAAGTCCAGAAGCTGGGAGGCTACGATTCTGTAACGGCGAACAGGCTATGGAAATCGATCTTCGACGACATGAGTGGCCACCAAAACAGCACCAGCGCCGCCACGGTCGTACGAAGGCATTACGAAAGATTTTTGTTGCCTTATGAGCGTCACGTCAAAGGCGAGGAGTACAAACCGTTGCCTGTTTCGGAGCGCCGAAGACTGAAGTGTAAGGCCGGCAGCAGCGCTAGTGACCCCGAGACCAGCGAGAGCACTTCTAGGAGCGGCAACAGCACCCCGATTCCGCAGACGCCTGTCACCCCCACAACGCCAACGGAAagtaaagaatttAACATCCAAATCAAGGCTGAAGGGAAAACGTCTTCACTTCGAAGTGTGCGCGTTAAGCTCGAGCGTCAAAAAGACAAACAAAGTAGTAGtgataaatttaacaataacaatattaaCGAAATCGAAACGTCGCCTACAATTAAAGATGACGTGTTTGATGATGATAATAGTATATCGAAAGCAGACGTAAAAACTGAAGCCGATATCAAAAGCGAATTGGTTAACATGGAAATTGTGTCTTTAGCGGATAAGCACGCGGAACCTTTAACGTCGGCAGTGGCTCCAGTAGCACAGAAATTACCTCCCGAAAAATCCCATTCACCCGTTGAAGGAAAGGAAAACGTACCGATAATCAAAACGGGGGATACTCCAAGTACAAATAGTAAAAGTCCTGACGTTCTCGAGGTGCCATACAAACCCAAGTCGCCTGAAATCATCGATTTAGAAACAGACACCTACAAAAGCACCACCACTAGTTTGACACAACCGTTTCTTCATGAAGTTAAGAagagaaaattggaaattttaaaagaggGAGGTTTAGAAGTCACCCCAGTTAGACCTTTCGTTTCGCCTTTACTAACAAAGGATGTTAGACCTTCAGTGATACAACAAGCGGGCGCGCAAGTTAGTCCGAAAGCCGTCAGCAACGACATCCACAACATGCCTCCGCCTTCTATTAATTCGGTCCCTCCAAAGCGCCTGCATTTGTCCGTACCTCAAACCCTAAACATCAGCCAAATTCCCGTTTCACCCAATCAAACTGCCGCCATTCACACCCCACCTATAGCAAGCAACCAATTTACTTATCCCACCGCCAGTTTACCACCTAAAGTTGTGCAATCCAAGTCGATTTATTCTTATTCGGAAAGAACGGTGTACGGCAACCCTAAGGATTTTAGCGTTCCTAGCCCGAATAAAAGTTTCCAGGTGCCTAATCACGTGGTGCACACCCCCAAGTTTGTCAGTCCGCCTCGGTTAGCTGGGGGCGATATTCTAGATTTAACTGTGACCAGTCCTCAAAAACCCGCAGTAGAAGTAATGAAAATGCCCCCTACTTCCGGGGCGAACCACCTAATGCCGCCGTTCAACATGCGCGAAAACCCCAGAATGTACCACAAGTCGCCTCCCGCCACCAACGCTAATTTACTGGACGGTCGGAGGTTGGGATCGAATCTGGAAATAACGCTGGTAGGACCAAACGGCAAACCCCCCGGCAACCACCAGGGGGAGGCccgaagatattcactgcctCCACCTCAATACCACCAAAATTCTAATAGATACACCCAGAAACGGGGACCTCTTGAAAATTActacaatcaaaaaatcccgaGACTGGACAGCAGTAAATACCTGAAGCCGGTAATGTCGCATCCTGTAACGAGTCGCGAGTCGGAAATCACCGTTCCTCAACCCTACGGCCGCAGTTCCAGCATGAAATCTGCGCCGACTCCACCCCCTATGAAACCCCCACCGCAAACCCCGCAACCCAAGCTCTACCCTCCCACTCCCGCCCCCGCTCCTTACCCCTTATCTTTGTATGAAGCCAACAAAATGCCTTATTTACCCATCCTCGATCCGCTTTATTATTCCGCCATGCAAAGTTTGTACTCGCAGAGCGCCATGAATGCCACACCGCCCGTTCTGCCTTTTCCCTCCACCGAACAGTTGAAGTTTTACACCGAACTGATGGCGCACAATTCGCGTTTCGGTTTGCCTTTCGGCGCCGACGGTAATTCTTCCattgttaatttcaaaaaacccTGA
- Protein Sequence
- MPRPLNDDGLSDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKCEREVKDPPPDEDTQNVIGSLAESSLDFSDVERERKASDCYPEQEGPTVIILSYPRYCRYRAMMRRLEGLEDEFLKYKIVSALGGLTAYTNNTRILFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSISPGSESNESESSISNVFNSSKEKITAEGGRNGLRCDSGNLRRSTRSTENSESKEFIKELTVFMKTNYTPIGRIPSLGYKELDLHSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHQNSTSAATVVRRHYERFLLPYERHVKGEEYKPLPVSERRRLKCKAGSSASDPETSESTSRSGNSTPIPQTPVTPTTPTESKEFNIQIKAEGKTSSLRSVRVKLERQKDKQSSSDKFNNNNINEIETSPTIKDDVFDDDNSISKADVKTEADIKSELVNMEIVSLADKHAEPLTSAVAPVAQKLPPEKSHSPVEGKENVPIIKTGDTPSTNSKSPDVLEVPYKPKSPEIIDLETDTYKSTTTSLTQPFLHEVKKRKLEILKEGGLEVTPVRPFVSPLLTKDVRPSVIQQAGAQVSPKAVSNDIHNMPPPSINSVPPKRLHLSVPQTLNISQIPVSPNQTAAIHTPPIASNQFTYPTASLPPKVVQSKSIYSYSERTVYGNPKDFSVPSPNKSFQVPNHVVHTPKFVSPPRLAGGDILDLTVTSPQKPAVEVMKMPPTSGANHLMPPFNMRENPRMYHKSPPATNANLLDGRRLGSNLEITLVGPNGKPPGNHQGEARRYSLPPPQYHQNSNRYTQKRGPLENYYNQKIPRLDSSKYLKPVMSHPVTSRESEITVPQPYGRSSSMKSAPTPPPMKPPPQTPQPKLYPPTPAPAPYPLSLYEANKMPYLPILDPLYYSAMQSLYSQSAMNATPPVLPFPSTEQLKFYTELMAHNSRFGLPFGADGNSSIVNFKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01283091;
- 90% Identity
- -
- 80% Identity
- -