Sgrm000107.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- pli1
- Assembly
- GCA_003264975.1
- Location
- QEWZ01000640.1:73939-75208[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3 1.4e+04 -3.5 0.0 19 24 130 135 117 135 0.71 2 2 1.6e-21 4.3e-18 65.4 3.9 2 49 208 255 207 256 0.96
Sequence Information
- Coding Sequence
- ATGTGTCAACGCCTACCATCAAACAAAAAAACAGTTAATCTCTATATTTCGAATACAATGCCCAGACCAAAATACAGTGAAGAATTTGATCCTCAGCCTTTTTTCAAAAGTGTACATACAGTTCTTGAACCGGCGGCTATATATTATGAACCAAGAGTTAAACTTGAAAATAGACAATCATTAAGACTCATTCTGTTTAAAGTTGAATTTGAGTTGCCAACCGTAATACAAAAAATGCTAAAAGACGAAACAAAAAATTTCCGATTGCAGATCCGATTTGGAGAACGGCTGGAAGggaagaaatatttaatagaaaaattaccaGATCTAACAAAGATAAGTGTCAATTCGAAGATATCATCCACGACCAAAACAagtcctataaattataaatgtgaacatttattcaaagaaaattatatttcagtattGTGGCCAGTTTTTAAAACACCATATTACATGATGATAGAGATTGTAGAGATTGTCTCGGTTAAACATTTGGTGGAACGCATACAATTTAACAATAGACTATGTTCTGTTAAACTAAATACAAAAGCTAAGGCCATAGAATTGATGAAAAGTTCAGTTACAGAAATTCTTGATTCAACGTCCTTTAAGTTTACATTATTGTGTCCAAtaaccaaattaaaaatgaaattaccaACAAGATCTCTGAAATGTAGTCATTTACAATGTTTTGATCTGTCTACATTCATTTTACTGAATAAGGTAAATCAAAAATGGATATGCCCAATTTGTAAGATATCCGTTCTAATCAATGAATTGGTTATAGATTCATTTCTTTTGGATATTGTCAATAATTCCACTCTTCCTGAAAATTGCTTTGAAATAACATTATATGCCAATGGTGAATGGGAACCATGTATAGAACAGACAATGGAAAACAATCAAAGCGAATCTGACGACGAATATTCAGAAAATACCATTGTTCTTATGGATTTGAATGATCCCAATTTTGAAAATCTCCtcgataaaaataactttaatgaaGATGAAAAATCTGATGAAAAACCTAATGTAAAACCTTATGTAAAACCTGATATAAAACCTATCTTACCAATAACAAATGGTTTGAATCCTAGTGAACCAATGCTTATCGATCTGACCATAGATGATACAGACATTAAAGAAGAACCGCCTactaaaatctttaaaacaGAAGACGCTGATGAATAA
- Protein Sequence
- MCQRLPSNKKTVNLYISNTMPRPKYSEEFDPQPFFKSVHTVLEPAAIYYEPRVKLENRQSLRLILFKVEFELPTVIQKMLKDETKNFRLQIRFGERLEGKKYLIEKLPDLTKISVNSKISSTTKTSPINYKCEHLFKENYISVLWPVFKTPYYMMIEIVEIVSVKHLVERIQFNNRLCSVKLNTKAKAIELMKSSVTEILDSTSFKFTLLCPITKLKMKLPTRSLKCSHLQCFDLSTFILLNKVNQKWICPICKISVLINELVIDSFLLDIVNNSTLPENCFEITLYANGEWEPCIEQTMENNQSESDDEYSENTIVLMDLNDPNFENLLDKNNFNEDEKSDEKPNVKPYVKPDIKPILPITNGLNPSEPMLIDLTIDDTDIKEEPPTKIFKTEDADE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -