Sgrm022560.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- -
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001478.1:80191-81637[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-22 5.9e-19 68.1 1.5 1 49 322 370 322 371 0.96
Sequence Information
- Coding Sequence
- atgggtttcgataatttaaatttaaatccaatAATCTTGACTATTgtTGTTGATGAGGCCTTTCACAATATTGTGCGTACATTTAGTTCAGAAAATATACGAAGAATTTTATGTGTTTTACCAAACCAGGTAATACATGGGGACAAAACGTCTTTATGTAACcgtcttatatattttttaagatcatCTGCTAGTCCATCTGAAAAATCTTTGGcgaaaaaagaaattttaaaagtcCATAAAGCTCGAAGATTGATACAACAACTTAGATTATTCAACAGACCTATACCTGCGTCGCTAATTCCAAAGGCTGTTATTATACGCCCAACTACATCCATAACATATGAACAGGATCTACCATTCTTTAAGACACTAAAAACGGTGATACCACCCTTATACTGCAGTACTACTACTTCTAAATATGTAagcttattttttatacaagaatatattaaagattttattgtTCAATCGTGGGATAGTGAatccaacaaatataattataaaattattttaagattagaACAAGTCGAAAGGAAATCATTCATTGAACGTTTACCTAACAATATTGATGTTTGTCTGAATGGTCGTCAATGTAagttacctaaattaaatacgAGTAAATTAAAGGTGGATGACATAAATATGGCTGTATCAGAAGAACCTGAGTTAAACTTCCCAGCATCAACAGACGACGATAGCATTTTTCTATGGCGACACAATATTCCTATTGAGTTAACTGAATATTTGGATTTACGAACAGGTTTAAACAACGTATTAGCTGTGTCATGGTCAAATGAACCAATTAGCTTTATTGTTGGTGTTTTTGTAGTCCAAAAATTAACTTGGAAAGATCTGCTTgtagaacttaaaaaaaaaccaatacgcGCCTATGAAAAAACTATCAAGTTTCTTAAGGAACTTCATAAAAGTGAAGTCGATTTTGGAGTTGACACTTTTACTGTTACTATCAAGGATCCATTAACTATGCAAAGAATGAAACTGCCTGCACGAGGTGTAGAATGTGTACATTTTTCATGTTTTGATGCAATAAGTTTCTTAAAAATGAATGAACAAAAGCAAACATGGTTATGTCCAATATGTAAGAAAcaagttaaatttgaaaacattgaaattgatgaatatttgttaaaaatagttCAAAGTCCAACTTTAAGTGAAgaatgtgaaaatattattttattgaaagatGGTAATTGGGCTGAAACAAAAACTAATGCTTTTTCAAgtaattcaaaaagaaaaatctgtgaatcaataattatataa
- Protein Sequence
- MGFDNLNLNPIILTIVVDEAFHNIVRTFSSENIRRILCVLPNQVIHGDKTSLCNRLIYFLRSSASPSEKSLAKKEILKVHKARRLIQQLRLFNRPIPASLIPKAVIIRPTTSITYEQDLPFFKTLKTVIPPLYCSTTTSKYVSLFFIQEYIKDFIVQSWDSESNKYNYKIILRLEQVERKSFIERLPNNIDVCLNGRQCKLPKLNTSKLKVDDINMAVSEEPELNFPASTDDDSIFLWRHNIPIELTEYLDLRTGLNNVLAVSWSNEPISFIVGVFVVQKLTWKDLLVELKKKPIRAYEKTIKFLKELHKSEVDFGVDTFTVTIKDPLTMQRMKLPARGVECVHFSCFDAISFLKMNEQKQTWLCPICKKQVKFENIEIDEYLLKIVQSPTLSEECENIILLKDGNWAETKTNAFSSNSKRKICESIII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -