Sgrm001950.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- -
- Assembly
- GCA_003264975.1
- Location
- QEWZ01003895.1:72-1981[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-08 1.6e-05 25.5 3.0 4 45 9 66 7 67 0.89
Sequence Information
- Coding Sequence
- ATGTCAAAAACTATAGTGTCAAAATTTTTACCAAACGAGGACGAAATTTTAGTTGAAGAAGTAGAAAAACAACGTGCTATCTATGATAGTTCTCTCGAGCAACATAAGGACTACGGTTATATAAGTAAATGTTGGAACAATATTTCGACTGTAGTTGGAAAATCATCTGAGGATTGCAAAAATAGATGGCGGAATATACGTGATACCTATAtgagacacaaaaaaaaactaggcACTGGATCTCCagcaatattttctaaaaagaaATGGCCTTTAGCTAGTCATTTGTCATTTTTAGATAATGTCGAATATGAAAGAATtacGATATCAAATGTGTGCAATGATCTCGATTCCACAATATCAGAAAGTAGCCAAGATAATACCGGAGAGCCATTGAATGAACCAACTGTCAGAGCTGAAGAGGTCATACATGGTAAAAGATCGAGAGCCAAGTATGAAAAATTAGAAGAATCATCTACTGACGAGATAGACTTATTTTTTAAGAGCATTGCAATTTCAGTGAAGAAGCTTCCTCCCAGAGGTAAAACTGAAGCTAAACTCGGTATATTATCTTTAGTTGCACAGCTCGaagaaaaatacttaaatgacGCTGGAGTGCAATCCACTCAACCAATGTTCCAAACACCCACTCAAATGATGTTTCAAACGCACTCTAGGTCTAcagattataacaatattatgtcacTTTCGAGCACACCATCACCATGCCTCAGTTCCTCATCAGCTACTTCTCAAGGATTTGAACCATATAGTGTTATGTACGATAACCAACAACCATAA
- Protein Sequence
- MSKTIVSKFLPNEDEILVEEVEKQRAIYDSSLEQHKDYGYISKCWNNISTVVGKSSEDCKNRWRNIRDTYMRHKKKLGTGSPAIFSKKKWPLASHLSFLDNVEYERITISNVCNDLDSTISESSQDNTGEPLNEPTVRAEEVIHGKRSRAKYEKLEESSTDEIDLFFKSIAISVKKLPPRGKTEAKLGILSLVAQLEEKYLNDAGVQSTQPMFQTPTQMMFQTHSRSTDYNNIMSLSSTPSPCLSSSSATSQGFEPYSVMYDNQQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -