Sgrm022279.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- ARID4A
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001664.1:91416-116336[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-23 7.7e-20 71.6 0.2 1 89 310 393 310 393 0.93 2 2 8 2.6e+04 -4.3 0.0 6 20 934 948 932 958 0.77
Sequence Information
- Coding Sequence
- atgtttgaaatatttacttactataaCAACTATTTAGTTATTGAATGTTCAACTTTGATCAAATTtactgtaaattcaAATGAACCACTTATTCTTGCTGTTGGTACAGAAGTTTGTATCAAGTCCAAAGGGGCATTTTGTGAagcaaaaattgaaaaaatatcagaaaattACAAATGCAAAGTTCAACAATATGctgataaaatatctaaatcttACACAGGTCGTCCAGTTAAAGGACAATTAAagGTGGGAGCAAATATTGCCTTAAGATGTCAAGATACAAATGATATAGTTcaaggaaaaattttaaaagtacaagATTATAGTGACTACACAATtgAATTGTATAATGGTGATATAACTTGTTTAAAGAGAAAATCAATAAGTTTGAAAAGTAAAGGATACTTTGCTAATAGCACTAATCATGATCAACTTCCGCGTAACAATCCAGAACACAGTGGTATAACTCATGTTGTACAAGATCGCAAAAGTCAAGAACATAAAAAAGATTTTGgGGAAATTAGGGAAGAAGAAGCTTTAGCCACTCAGGAAAAAGATATTGGAAAAGTAGTTTGTGTTGTAACTAgtacaaaaaagaaattaagaGATAATTGGTTTCCTGGTTTAATAGTTGCACCCACTTCACAATCCTTGGTCAGAATTAATTTTGTAGAAAACTGCCTAGTTCGTTCATTTAAAGACGGAAAATActATACAGTACCAAAAAACGAAATAACTGAATTTACAAAAGAAATTGGTTCAAGAGTGGAAAATCCTACGCTTAAAactgctgtTAAAAAAGCCAATTGTTATCTTGACAATGATGAACTTCCACCACACTGGGATCGAGATTTTTTATTTGGTGTTGACACAACTTGTACTACTACTTATGATGGCAATaatTCTGATGAAGAACCAATTGAAGAAAAAGATTATTTTGTCGCACAGTTAATTAAATTCATGGATGACCGAGGAACTCCTCTTAATCAAGCTCCAATGATTGATGAAAAGGATGttgatttatataaactatttaaggttgTCAATAACTATGGAGGATATAACAAAGTTGATAAAGATAATCAATGGCTATTTGTATCAATTAAAACTGGTCATGAACGACAATCATCTTTATCTGTTAAAAATTTCTATCAAaaATTTTTATGTGGTTTTGAgaatttttatcgaaaattagGTTGTACAATGTTAAATCATCCAAAGAAAGTAAGACCACGCTTCAGTTTTAGTCGCAAAATTGTGAGAgatattaacaaaacattacCTGAAAAGTCTGCAAAGACAAAATcagacaataaaaaattaaaggatTTCACAGGAGCTAAAAAAGTAGCCaaagctataaaaaataataaatcatataataataaacaattagtgAAATGTGATTCAAACATActgaaattgaaaaatgttaaaactaaaaatgaattggcaaatattttaaaaaaagagatTGATACTGAAAAATTAGATGatcaaattattgaaaatacggaAGTAAAATCTGAGGATACAGATATACCAGATATAAGAAAAAGGAAAGCCGATGAAGTACAAATCAAAACTTTTTTAAGCATAATGCCTGCattcaaaaagtcaaaaagaGGAGTATCTTATTATCAGCAAGACATTTCAATTACAGGAAAACCTGATGATGTAcctaaaACCACTGAAAAAAAGAAGAATGTTAGAAAGAACAAAAGTGATAAACTGAAGACTTCAAACACTAATGCAACAgtttttaatataaaagtagaaacatttaataaaaatacattagtgGTTGTCGGAGatcatttattagtatattataatcaaaatcaattGTATGAAGCAAAAGTtcttaaaatgcataatattgatGGAGTGatgaaatattacatacattatacaggaTGGAATTTACGGTATGATGAGTGGATTGACATATTAAGAATTGGATTCAAAATCATAGGTCTTGTACAAGGACCAGATGGTCATAATAACATAGATTCATCTAAAATTAGTCCTACAGAAaacattgaaaaaataaaaactcctAGGAAGAAAAAATACGATGATAAGAAGATTTTAAACAACAATACTCCAACACTTAAaaatataaAAGATGAACCGTATGATGATGAAAACGACATGTTAACAATTGTTGAAGATGATTTAACAGTTTACAATAGAGATTATCAAACCATAACTGATAATGCAAAAcaAACAAATTGGGATCAAGAAAAAATTCTATCAACTTCTAGTAGAACTAGACAATCAGTAGTTACTCCGATCAAATCATATTCACTAAGAACAAAAACACCTTATAGTAGTACTCGGCCTAGAAGAACATGTACTTTGACTAAATCGTATTTTAataATTCCGATTCAGAAACCGAATATAAAGTAAAACCTGTATTCAAGCAATAtagtaagaaaaaaacaatcaaaactACTGATCCGGATGTCATAAAAACAGAGCCTTTAGatactaataatcaaaaaaaaaaaatgtgtttaagaACATACCCAAACAAAAAAGCAAAATCATCTGTGTTTAAAACTCATGACAATACATCTGAAGAGATCGAGATTTGTAAACAAGTCATTCTAAAACCATCATTTGATTTGAATTTTATGGTTCCATCACAAAGTTATGATATAAAATCTAATGCAGATAATGAAGGTGTAGACGACGTACAGAATGAAAGTAAAATTGATAACAATGCTATAATTGAAccaacattattttcaaattattatttgtcacctaaaaaaaaaactaaaaaaaatttaagaaaactgtccaagttttcaaaaaatcggAATGAAGAAATCGAAATTAATGCTGAACAATTGACAATGacaaaaaaatcagaaatttttAATACCATCAATTACTCATTGTTTTTTGGAgttgaaaaacaaaatgaattagaaaaaataactgAAGTCATCTCTTGTCCTTTAGATGATAAATCTGACAAGTCTGGTCCtgatttttatatacacaaaataaaatcagaTGTGAAAGAACGTATGCAAATTTCaacaaatagtaataatgatatcaTTCAAGAAACTAACATATTAAATCAACAATTAGaaattgaagttttaaaaagtgATGAACTAATCACAGATGATGTTTATGAATTGAAAGAATTTAAATCATGTAGTTTCGATATTATTTCTTCTGACATTGATTCCtcaaaattatcaaacataGAGAAATTTGATGAGCTACCTAGAGTTATTGATTCTTCAGCACAGTTAGAAGTAGTTGAAAACAATTGCTCTATAATACCATTTGTTCCTACTATCTATAGCACAAATTCATTTGAGATAAAAGTTAATGataaattgaacaatataaatGAAATGGATGATTCATTTACTCATGACAAATCTGATGTATCTgatataaaaaatcaaattttagattCATCTATAAAACCATTTGAGCCATCACCCAATAGCATTTGTATTTTTCCAAATGAATTTAATGATTATGCCATTAAAAATGAGTATGTTGATgttgataatgatgatgatgatgatgatgatgatgatgatgaatcAAGATTGGTAATAGTAGAGGAACCTGATTATCAAAGTGATGAAGACATCGATCAATCCTTACCACCAGTACCATCAAGTATACCTCTTCATAACACTTCACTAATAGATACAGATGATGAAAGTAATATATACTATGACGAAAGTGTACAAAATGTTCTTATTTCTAGTTTTAAAATGTCTCCACATTCTAAAAGTTATGATGATGAAGTTGAAAATGTCGATAAATCTATAGTGCTACCACTACAATTTAGAGAAAAAATAGTAGATTCAGATTATCACAATAACATTTTAGTTATAGAGAACAATcattatgtttcaaaatatgATATTCATAAGCCTAGTACCAGTAAAGGTTTATTTGATTCAATAGATCAACCAGGTATAAGCAAAGATACTTTTTATGAAACTAATACTAGAAATGATGCAAACAATAGTTTCTTTGTAGCTGAACaaactgttaataatattaattttgatacaaaCGTTCCTTGCATAAGTCATTTATTTAATCACAATATTCCAAGTACTAGCAAGAATAGTTATTATGATAACTCTATGCCTAGTACTAGTAAACAGTTTTATAATCCAGAATCTAATGTAAACAACATACTTTATGAAGAAACTATACTAGATAATTCAACTAGTATGCCAACAGAGCAATTTGGTCAAGAAGAAACAATTAAGATATTtggaaaattcaataataatgaaatagaaGCTATTTTAGGCATGTGTGCTATGTCTCAATCTTGTCAAATGCCAATGGTTGTTATGGCAAATGCTACtgagaaaaaaacaaaagaaaacacTAATATTcatcaaaagtaa
- Protein Sequence
- MFEIFTYYNNYLVIECSTLIKFTVNSNEPLILAVGTEVCIKSKGAFCEAKIEKISENYKCKVQQYADKISKSYTGRPVKGQLKVGANIALRCQDTNDIVQGKILKVQDYSDYTIELYNGDITCLKRKSISLKSKGYFANSTNHDQLPRNNPEHSGITHVVQDRKSQEHKKDFGEIREEEALATQEKDIGKVVCVVTSTKKKLRDNWFPGLIVAPTSQSLVRINFVENCLVRSFKDGKYYTVPKNEITEFTKEIGSRVENPTLKTAVKKANCYLDNDELPPHWDRDFLFGVDTTCTTTYDGNNSDEEPIEEKDYFVAQLIKFMDDRGTPLNQAPMIDEKDVDLYKLFKVVNNYGGYNKVDKDNQWLFVSIKTGHERQSSLSVKNFYQKFLCGFENFYRKLGCTMLNHPKKVRPRFSFSRKIVRDINKTLPEKSAKTKSDNKKLKDFTGAKKVAKAIKNNKSYNNKQLVKCDSNILKLKNVKTKNELANILKKEIDTEKLDDQIIENTEVKSEDTDIPDIRKRKADEVQIKTFLSIMPAFKKSKRGVSYYQQDISITGKPDDVPKTTEKKKNVRKNKSDKLKTSNTNATVFNIKVETFNKNTLVVVGDHLLVYYNQNQLYEAKVLKMHNIDGVMKYYIHYTGWNLRYDEWIDILRIGFKIIGLVQGPDGHNNIDSSKISPTENIEKIKTPRKKKYDDKKILNNNTPTLKNIKDEPYDDENDMLTIVEDDLTVYNRDYQTITDNAKQTNWDQEKILSTSSRTRQSVVTPIKSYSLRTKTPYSSTRPRRTCTLTKSYFNNSDSETEYKVKPVFKQYSKKKTIKTTDPDVIKTEPLDTNNQKKKMCLRTYPNKKAKSSVFKTHDNTSEEIEICKQVILKPSFDLNFMVPSQSYDIKSNADNEGVDDVQNESKIDNNAIIEPTLFSNYYLSPKKKTKKNLRKLSKFSKNRNEEIEINAEQLTMTKKSEIFNTINYSLFFGVEKQNELEKITEVISCPLDDKSDKSGPDFYIHKIKSDVKERMQISTNSNNDIIQETNILNQQLEIEVLKSDELITDDVYELKEFKSCSFDIISSDIDSSKLSNIEKFDELPRVIDSSAQLEVVENNCSIIPFVPTIYSTNSFEIKVNDKLNNINEMDDSFTHDKSDVSDIKNQILDSSIKPFEPSPNSICIFPNEFNDYAIKNEYVDVDNDDDDDDDDDDESRLVIVEEPDYQSDEDIDQSLPPVPSSIPLHNTSLIDTDDESNIYYDESVQNVLISSFKMSPHSKSYDDEVENVDKSIVLPLQFREKIVDSDYHNNILVIENNHYVSKYDIHKPSTSKGLFDSIDQPGISKDTFYETNTRNDANNSFFVAEQTVNNINFDTNVPCISHLFNHNIPSTSKNSYYDNSMPSTSKQFYNPESNVNNILYEETILDNSTSMPTEQFGQEETIKIFGKFNNNEIEAILGMCAMSQSCQMPMVVMANATEKKTKENTNIHQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303968;
- 90% Identity
- -
- 80% Identity
- -