Sgrm024248.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- osa
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001404.1:1670279-1691434[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-25 5.2e-22 78.6 0.0 2 89 685 772 684 772 0.91
Sequence Information
- Coding Sequence
- ATGGCGAATCCCAGAGGACCGACGCCTCCGCCGTCGCCTGGCCATCAGACTCATTATCCACCACCGCCGTCTTCACCCACCGGATACCAACAGCACCATCGGGTACCGCCTTTACACCATCAGTATCCACCGGGGCCACCGtcgcagcagcagcaacagcagcaatCGCAGCAGCCGCCACCTCATCAACAGGTACCTTATGGCAGCTACCCGAACCAGCAACCGCCGGTCGATCgtcagcagcagcagcagccgcCCCAACTTCCTCCACAACCGCCTCAACAACCCCACACAGGTCTGGGGCAGACCACGTCGTCGCCGGCGTCGGCGAGCCCGCCCGCTTTGCCCCCCGTGTCGCAGGGCCAAAATGCCCAGCAACACTCGTCGCCGACGCCGCCGCCACAGCCTCAGCAGCAGCCACCTCATCAGTCACCGCCGCAGGTTCATCCGGATTTGACAAGTCAAAACAGTAACGATAGCAATTGTGGTGCTGGTGCTGGCAATGGTGGTACTCCTCTGCGGCCATCGCCGTCTCCTACAGGATCTACTGGTTCGCGTTCCATGTCGCCTGCTGTCACAGCACCACCGGGTGGTGGACCGCctcaacaacaacagcaacagaaCATTCCAATGCCGCCTAGGCCACCAAGCAGTCAACAGCAGCCTGATCCAGGGCAAGCTACTCAAAATAATAGAATGAGCCATTCGCCTATGGGGCCACAACAAGGATATCAACAACAACCATCCCCACAACCTCCAGGTGGAATGCCTCATATGACAGGTCCTTCATCTGGAGCACCAGTACAAAATCCGTACAAAATGCCTGGACCGAATCCTTATGGCCCTCCTCCACCTGTATCTTCACATAGTGGTTATCCTTCACAACAACAGCCTGCTCCGCCAATGGGATCATACCCTCAACAACCTCCTGGTAATTACGGTGCTAGACCTCCTGGTATACCTTATCAAGGGTATCCACCACCTAATAGTAATGGTCCTCCACAACAATACTCTCCTAGAGGTATGCCAATGCATCATGGACCTCCTCATCAATTTCCTCCTTATCAAGGATGGCCTGGTAGTGGTCCACCACAAGCACCACCACCATTAAATAATAGTCACCATAGTGGTCCTGTTCAACCACCTACACCTACCAAAGTACCTCCCCCATCATCTTCCccacaacagcagcagcagcagcagcagcaacagcaacagcaacaacaacaatcaCCACAAACACAGCCTCAGCAACACCAGCAACCACCAATTCAGCACCCTCCCCCTGCACAATCACCATTACACCATCACCACCCTCATCATCCTCCCCCTCCAGGACCTCATATGCATCCACATGCTCATCAAATGCATTCAATGCAGCAAGGCACTTCTCCTGGACCACCTCCACCCGTTTCACCTGGTCCCAGGCCTCATACACCACCTCATCCTCACTACCTCAAGCAACACTTACAGcAACAACACAAAGGGCCTGGAGGCTATCAAACATCAGGTCCAATTCCACCTAATTCTGGACcaggaaattatttaaattctatgcCTCCACATAGTATGGGTCCACCAGCACCAGTTCAATCTAATACTGGTCCTCAAATGGCACCACCAAATCCTTCAATGATGTCAGTTGACCATGAAGTATCACAGCAACAGCAAAGCCTTAGTGGTGTTGTAACTTCTGTCGTTACCACTGGACCTGATGGTACTGCTATTGATGATGCAAGTCAACAATCGACTCTATCAAATGCCTCAGCAGCTTCTGGTGATGACTCAAATTGTACAACACctaaaagaaaagaaaacatGAGTGGTGGTATGATGTACCAACAAGGAATGGGTGGTATTATGGGACCCCCATGTTCACCTGCCCATGATGAGTATTCAAATCCAGATCCAATGGCACCTGCTTGGCCTAGAGGACCTCCATCTCATAACCCAGTATTTAATAGCCACATAGCTCCTCAAAACGAACATGTATATCGACcaaagaaacatGACAGCTTGGGTAAACTGTATGAAATGGATGATAATCCAGAACGACGTATTTGGTTGGATAAATTGTTACATTTTATGGAAGAAAGAGGAACACCAATCTCTACATGTCCTACTATCTCCAAAAACCCCCTTGATTTGTTCcgtttgtatatatatgttaaagaGCGAGGGGGTTTCATGGAAGTTTGCAAGgtaacaaaaaataaaatatggaaagATGTTGCTGGTTTGTTGGGTATTGGTGCATCATCTAGTGCAGCTTACACTCTTAGAAAGCATTACACTAAAAATTTATTACCATATGAATGTCACTTTGACCGTGGAGGCATAGAtcctatacctataattaatcaAGTTGAATCTTCCTCAAAGAAAAAAAGTTCTAAAGCAACATCTGTACCTTCTCCTGGTTCTGCAGGATCTAATTCACAAGACTCGTTACCATCTGCACCAACTGCTCCAGGACCAGGTCATGTAGATGGTTACCCAGGATATGGAGGTTATAGTGGTCCACAAGATTATAATTCACCTCAAAGACCTCCACATCCTCCTCATGGAACACAAGGAAGTTACCAAGGACAAGGTGGATACAATCAGCAATATCCAGGCAGCAATGATCAGTATGGACAACATTATCCACCAGTTAGTACTCCGGTTGGTTACCCGAGTGGTCCAGTGAGACCACCTTTATATCCACCTTATTCAAATGATGCTGACAGaaattatgGTGGTTCAGTTCCTCCTCCACAAGGTCCACCAAATACTCCTCAGGGACCTGGGAATGGTCAAGATCCATATGGACGTGGACCAGTTCCACCACCATCTGGCTATCAACAACCACCCAGGTTTCCTGGACCCCCACCACCTCAGAATTCTTCACCCGCTACAGTAAACCAAACACAAGGTGGATCAGTTTCTACCCCAGGCTATCCACCTGGTCAACAACCTCAACCCGATTATTATCGACAAGAACCTCCCGCTAGTCCTGGATATCCACCTACTAGTGCTCCAGGTACTTACCCGGGAAAAGGAATGCCACCACCACAGCCACGGCGTCATCCTGATTTTGCTAAAGATCAACAAGCTGGTCCTCCCCAGCCAGCTGGTTATCCAGGTTATGGTCCTCAGCAACGACCTATGTATCCagGATGGACAGGTACACCAAATGCTGCTTCTAATCAATATCCAAGACCTGGATATCCACCTGTATCTCAACCACCACAGAATTGGTCACAGGGTCCGCCGCGTTCTATGCCTCCTTCACACCCAGGACAACCACCCCAATGGGAACAACATAGATATCCGCCACAAGGACAACCTTATGGTGCACAGCAAaatcaTTGGGGTCCAATGGCGCAAGCACAAATGAGAATGCCAAGACATGGATATCGCCCTGACGGAAGTAAACCGTATGGACCACATGGTCCAATGGCTCCACCACCACATATGAagcctGGAATGCCAGGGCAACCAATGTTTCAAGGCAGTAGTTTATTGAAGCGAGAAGTCATTTTCCCTCCTGATAGCATAGAAGCTGTAACACCAATTCTTTATAAACGTCGTCGAATGATGCGGCACGACGTTGCACCCGTGGATGCATGGCGATTGATGATGTCTTTACGCTCAGGTCTTTTAGCTGAGTCTACTTGGGCCTTGGATGTGCTCAATATATTGCTATTTGATGATATGTCTATACCCTTTTTTGGACTAACACACATGCCTGGATTATTAGATGTACTCTTAGAACATTTCCGGCAGTCATTGGTTGATATGCTTGATACTGATATCAAATCGTATTGCTGGTATGAAAAGTCTAAAGTGATAGAAGATATACCAGATGTTGGTGCTGTAGATAACGTAAATCCAAATGAAAAAGCATATTTCCCAGATCCTACCTTCCCCAATCAACGACCAATTAAGAATTCTGCAATTATTGATGGAtctaaagaattatttattaaaaatggcaAGAGATCATGGGATGTAATTGATAATTATGACATGGGATATAACATTGCTGAAACAGATACAAGTTTTCTTGTGCCTTGTTTTCGTTCAGAGTTTGGTCTTGTGCCATTTGTCAAATTACTGAAGAGTGATAAACCTAAAGCAAAAATATTAGATGATAAgacatgtataaaaaaagaattagaTGATAAGGAGTTAGTACAAAATAGTATTGAcactattgtaaatataaaaaatattaatgtgcgCGATCCAATGGGCGTATTGAAGCGTAAGAGCATAACAGACTATGAAGATGAAAGTTTCTCTAAAGATGAATCAAGCTTGTCATTAATAAGCGAAAGTCAAGATTCCATTGGTAAACGGTGTGTGTGCATATCGAATATCTTACGAAATCTTTCATTTGTTCCTGGTAATGAATTAGAGTTTGCAAAAAGTGGCCCATTTCTTGGTTTAGTTGGCAAGCTGTTATTAACACATCATGAACATCCACTGCGCTCATCAAAAACTAGGAATTATGATAAAGCTGACGATGATACAGAGTCATTATTTAATTGCACTACAACAACAGATGCCGATACAATTGAGCCAGGCAATGACGCAAAGTGGTGGTGGGATTATTTAGACGTTGTCAGAGAAAACTTGCTGGTTTCTTTGGCTAACATTGCTGGTTATGTTGATTTGAGCACATTCAATGAAGATATTTCACGCCCTATCTTAGATGGTCTACTACATTGGGCTATATGTCCAGCAGCTGCGGGCCAAGATCCATTTCCTTCTGCGCCACTCTCGCCTCAGCGACTAGCATTAGAATGTTTGTGCAAGTTGTGTGTCACCGATAATAATGTAGATCTGGTCATTGCTACCCCACCTTACTCAAGACTAGAAAAACTGGCCAACGTCCTTACTCGCTTATTATGCAGGACTGAAGAACAAGTACTCAGAGAATTCGCAGTCAATTTGTTACACTACTTAGCAGCTGCAGACAGTGGCATGGCACGTACGATAGCACTTCAAAGTCCATGTGTTTCATTATTGGTAGCATTTATCGAACAGACTGAACAGAACGCTCTGAGTGTAGTGAACACTCATGGGCTGAATGCACTCCGCGATAATCCAGATTCAATGGGAACTAGCCTAGACATGTTAAGGAGAGCAGCAcgaatattgttgttgttatccAGACATCCAGACAACAGACCCTTGTTCTTGCAACAAGAGCAGAGGTTACTGTCGTTAGTTATGAGCCAGATACTCGACCAGCAAGTGGCAGCCCTCATATCGCGCGTCCTATTCCAATGTTCCAGAAATACGCCGTCTCCTCTCGCCCAATAA
- Protein Sequence
- MANPRGPTPPPSPGHQTHYPPPPSSPTGYQQHHRVPPLHHQYPPGPPSQQQQQQQSQQPPPHQQVPYGSYPNQQPPVDRQQQQQPPQLPPQPPQQPHTGLGQTTSSPASASPPALPPVSQGQNAQQHSSPTPPPQPQQQPPHQSPPQVHPDLTSQNSNDSNCGAGAGNGGTPLRPSPSPTGSTGSRSMSPAVTAPPGGGPPQQQQQQNIPMPPRPPSSQQQPDPGQATQNNRMSHSPMGPQQGYQQQPSPQPPGGMPHMTGPSSGAPVQNPYKMPGPNPYGPPPPVSSHSGYPSQQQPAPPMGSYPQQPPGNYGARPPGIPYQGYPPPNSNGPPQQYSPRGMPMHHGPPHQFPPYQGWPGSGPPQAPPPLNNSHHSGPVQPPTPTKVPPPSSSPQQQQQQQQQQQQQQQQSPQTQPQQHQQPPIQHPPPAQSPLHHHHPHHPPPPGPHMHPHAHQMHSMQQGTSPGPPPPVSPGPRPHTPPHPHYLKQHLQQQHKGPGGYQTSGPIPPNSGPGNYLNSMPPHSMGPPAPVQSNTGPQMAPPNPSMMSVDHEVSQQQQSLSGVVTSVVTTGPDGTAIDDASQQSTLSNASAASGDDSNCTTPKRKENMSGGMMYQQGMGGIMGPPCSPAHDEYSNPDPMAPAWPRGPPSHNPVFNSHIAPQNEHVYRPKKHDSLGKLYEMDDNPERRIWLDKLLHFMEERGTPISTCPTISKNPLDLFRLYIYVKERGGFMEVCKVTKNKIWKDVAGLLGIGASSSAAYTLRKHYTKNLLPYECHFDRGGIDPIPIINQVESSSKKKSSKATSVPSPGSAGSNSQDSLPSAPTAPGPGHVDGYPGYGGYSGPQDYNSPQRPPHPPHGTQGSYQGQGGYNQQYPGSNDQYGQHYPPVSTPVGYPSGPVRPPLYPPYSNDADRNYGGSVPPPQGPPNTPQGPGNGQDPYGRGPVPPPSGYQQPPRFPGPPPPQNSSPATVNQTQGGSVSTPGYPPGQQPQPDYYRQEPPASPGYPPTSAPGTYPGKGMPPPQPRRHPDFAKDQQAGPPQPAGYPGYGPQQRPMYPGWTGTPNAASNQYPRPGYPPVSQPPQNWSQGPPRSMPPSHPGQPPQWEQHRYPPQGQPYGAQQNHWGPMAQAQMRMPRHGYRPDGSKPYGPHGPMAPPPHMKPGMPGQPMFQGSSLLKREVIFPPDSIEAVTPILYKRRRMMRHDVAPVDAWRLMMSLRSGLLAESTWALDVLNILLFDDMSIPFFGLTHMPGLLDVLLEHFRQSLVDMLDTDIKSYCWYEKSKVIEDIPDVGAVDNVNPNEKAYFPDPTFPNQRPIKNSAIIDGSKELFIKNGKRSWDVIDNYDMGYNIAETDTSFLVPCFRSEFGLVPFVKLLKSDKPKAKILDDKTCIKKELDDKELVQNSIDTIVNIKNINVRDPMGVLKRKSITDYEDESFSKDESSLSLISESQDSIGKRCVCISNILRNLSFVPGNELEFAKSGPFLGLVGKLLLTHHEHPLRSSKTRNYDKADDDTESLFNCTTTTDADTIEPGNDAKWWWDYLDVVRENLLVSLANIAGYVDLSTFNEDISRPILDGLLHWAICPAAAGQDPFPSAPLSPQRLALECLCKLCVTDNNVDLVIATPPYSRLEKLANVLTRLLCRTEEQVLREFAVNLLHYLAAADSGMARTIALQSPCVSLLVAFIEQTEQNALSVVNTHGLNALRDNPDSMGTSLDMLRRAARILLLLSRHPDNRPLFLQQEQRLLSLVMSQILDQQVAALISRVLFQCSRNTPSPLAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972834;
- 90% Identity
- iTF_01432815;
- 80% Identity
- -