Sgrm018066.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- Nfil3
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001742.1:280798-286458[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-14 1e-10 42.0 1.2 1 52 137 188 137 195 0.92
Sequence Information
- Coding Sequence
- ATGGTAGCGGACACGGCTAGCAGTTATCATCATCAACAGAAAACTCAGCCACAACAGCCACAGCAACCAAACCAACAtcagcaacaacagcaacagcaccACCACCAGCAACAACAGCAGAAACTCCAccaacagcagcaacagcaacttCACCAAATCCATCTGCAACgccaacaacaacagcaacagcagcagcaaaaCAGTGGCGGAGCCATGCCGCAATATTGTAGCGACATGGAACAGTCGGGTGGTCCAGGGAGCATGAGGTACGATGATTCGGTATCACCCGGACCGGAATCGCCAGGCCCTGGTGAGCCATACCCTCCTGGGTTCGACCTGACGGCGCACCTGCAGCACAAGGAGTTCTTTGCTCAGCGTAAGCAACGTGAATTCATACCGGATAACAAGAAGGATGAAAGCTACTGGGACCGAAGGCGACGAAATAATGAGGCGGCCAAGCGGTCCCGCGAAAAGAGGCGGTTCAACGACATGATCCTCGAACAACGGGTGGTCGAGCTGAGCAAAGAGAATCACGTGCTCAAGGCTCAACTCTCTGCCATCAAGGACAAGTTCGGTATCAGTGGCGAGGCCGTGGTCAGCGTTGAACAGGTTATGGCTTCTCTGCCGACAAACGAACAAGTGTTGAGCATCACTAAACGCCCGAAACTGTCCACATCGTCGTCGTCCTCGTCGGTGGGTTACTCTCAGAACGGGTCAGGTCCCATACCCACGTCAGTCATCCACCAACCCGTCCAGTCAACCACGCCCAAAATGAACGGCTCGTACTACGGCGGCGCACAGTCCGACTGCGGCAGTCCCGTCGACCAACACCAACTccaacagcaacaacagcagcagcaacagcaacagcagcagggCGACCGTTCGAACGGTCTGCCGATGTCCGTGGCCGCCGCAGCCGTGGCCGCCGCGGCCCAAGCCGGGTACCCGCCGTACCCGTTCGCGCCCGTCCTGCCGCCACTGCAGCCGCCGTCGTTCGAAGCGGCCGCCAACAGCGTACTGAACCTCAGCCGCCGGCCGCCGTCACCGTACGAGCTGAGCAGCGGCAGTGGCGACGACACTTCGTCGTCTTGCGTGCCCATATCACTGGCGTTCGTGGCCGCGGCCGCGGCCGCAGCGGCTGGCGGAGTGGTCGGCCCGAACGGCAACGGCAACAACAACAATCTCCACCATCAGCACCGGCACCGACATCACTTCAACGGTAACGGCATGATGGCCATGATGGCCAACGGCGGCGGAGGCGTACCGATCGCTGTCCTCAACGGCAACACCGGAAACCCCCCAGAGAAAAAAATCACCGAAGAAGTCAAAGCCATACCAGTCGAAACGTGCCGAAAATCATATGAGAGCTTTAGAGATCGTCTACAACAGTGTATTGATGCTGACGGCCGCCATCTTggagatataattttcaaacaataa
- Protein Sequence
- MVADTASSYHHQQKTQPQQPQQPNQHQQQQQQHHHQQQQQKLHQQQQQQLHQIHLQRQQQQQQQQQNSGGAMPQYCSDMEQSGGPGSMRYDDSVSPGPESPGPGEPYPPGFDLTAHLQHKEFFAQRKQREFIPDNKKDESYWDRRRRNNEAAKRSREKRRFNDMILEQRVVELSKENHVLKAQLSAIKDKFGISGEAVVSVEQVMASLPTNEQVLSITKRPKLSTSSSSSSVGYSQNGSGPIPTSVIHQPVQSTTPKMNGSYYGGAQSDCGSPVDQHQLQQQQQQQQQQQQQGDRSNGLPMSVAAAAVAAAAQAGYPPYPFAPVLPPLQPPSFEAAANSVLNLSRRPPSPYELSSGSGDDTSSSCVPISLAFVAAAAAAAAGGVVGPNGNGNNNNLHHQHRHRHHFNGNGMMAMMANGGGGVPIAVLNGNTGNPPEKKITEEVKAIPVETCRKSYESFRDRLQQCIDADGRHLGDIIFKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -