Sgrm007347.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- ATF6
- Assembly
- GCA_003264975.1
- Location
- QEWZ01000258.1:5944468-5955613[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-15 3.6e-12 46.6 6.4 3 55 278 330 276 336 0.95
Sequence Information
- Coding Sequence
- atgcCGAACgaagacattttttattcttcTGATCCCATTTCATCAGATCCTAGCGATATTTCTACTTTGCCTTGGTATTATGATGAATTTGgaatgaTGGATGTATTAGTTGAACCTAAGGATAAACTCTTTGAGttTGATGAGCTTAAAATGGAACCATTGTCACCTTCTTTTGgtgatgatataaaatttaatactggAATTAGCGATCTAGATACTGATTATATGATGCAATGGAACATTGAATCATGTTTagaaaatggtattgatttggaaaaaaattcatTCAAATCATCACCTCCATCATCTCCTTCTTCTAATGGGTCAATGCCAAGTGGTGATTCACAATCATCATTTGATTCAAACCAAatattaccaaaaatattatcatcaaatatgagtaatgaaaatacaataatttgtgATACTAATACAGTATTCGCTATAAAATCTACGAATGGAAGCAGAACATTACCAAAACTGAAAATATCTCCAACTCCAATTAAACCAAATTTCAATGCAGTTACTAGAACTAAtaacaatttcaaTGTTTCTTCAATGCTGACTGATCAAACTAATCAATCTTCAGttacaatttcaaaatcatttgcATCAACTCTCCCACGAAAGATTATACTAACTTCagatcaattttcaaaaataactaaattacaaaaacaaaaacaaattgatttGAATGTACCAACTGCAATACCATTAGTATCAAGTACATCAGAAGTTAATACTCAATTGACATTGCCAATAGTTGATATTGATTCAGCAAAGTCTAAAACTTCTACTACCACTTTACAATATAATCaattaagTGCAATAAAACGACATCAACGTATGATACGAAATCGAGAAGCAGCAAGCTTATCTCGTAAAAAGAAAAAGGAATACGTAACATcattagaagaaaaaatatgtatactagaAAAAGAAAATCtggaattaaaaattGAAAATTCAGCATTAAAAGAACGGCTTAAAATTTTCGACAAATTATCTTCAATAACAGATAGACCTATTATCAAAAAAGCCAAAAAAGCTACAGCTATATTATCAGTAGTTTTAATGATTTCTTTAAATGTTGTACCATCAGGgCTTTTCAATGTAAGGCAATTCGATAAATCACAAATGCAAATGAAtcttggtgaaaattacaatacaaaaaatattgaaaacataaaCTTTCATAGTAGAAATCTATTATGGGTCAATGATTTTGAAGACAGTAATTCGTCGTTGAATGCTACTGAACATTTGATGTGTccaacatttataaatgtatctGAATCGAAaagaattgatAGTGAACTTCGAAAATGGATAGAACCAAAGAATTTAAAGTTGTTGAATGATAATTTATCAATGGTTTATGTTGAACCTCCAATTATAAGTACAACTATTGAACATTCCAAAGACAATGAATCCATTggaaataaagataaaaaaatggaAAGAACTCACAAAAGGAATTTTAAAAAAAGAAAGCATATTCCATCTAACAACGATTTCATAGAAATATTCGGCCAGTTGAAGTTAGATAGTAAAGAAAGTTTATTTGATTCCATTGAAAGGCAAGATGATACATTCTATGTTGTATCTTTTTCTGGTGATCATTTATTATTACCAGCTAGTCATAATGCTTCTAATACTACCCTTCGACCAAAGATGTCACTTGTTTTTCCAACCCTATCATCAAATGGTTCTGATTTTGTTACTATGATTCAAATTGATTGTGCAGTAACTGATACAAAAACATTACATATTCGAGATACTCACTTAAGACATAACaatgagtttaaaaataatgtttcttcAAACTTAAAACAGCACaatgGCCATAGAAACAATATAGCACACAAGCCCTATTTTGTACGACAAAGTTACTCTGGTTCAATGTTTAGCAAAATGAATCATGAACTTCCaagttactaa
- Protein Sequence
- MPNEDIFYSSDPISSDPSDISTLPWYYDEFGMMDVLVEPKDKLFEFDELKMEPLSPSFGDDIKFNTGISDLDTDYMMQWNIESCLENGIDLEKNSFKSSPPSSPSSNGSMPSGDSQSSFDSNQILPKILSSNMSNENTIICDTNTVFAIKSTNGSRTLPKLKISPTPIKPNFNAVTRTNNNFNVSSMLTDQTNQSSVTISKSFASTLPRKIILTSDQFSKITKLQKQKQIDLNVPTAIPLVSSTSEVNTQLTLPIVDIDSAKSKTSTTTLQYNQLSAIKRHQRMIRNREAASLSRKKKKEYVTSLEEKICILEKENLELKIENSALKERLKIFDKLSSITDRPIIKKAKKATAILSVVLMISLNVVPSGLFNVRQFDKSQMQMNLGENYNTKNIENINFHSRNLLWVNDFEDSNSSLNATEHLMCPTFINVSESKRIDSELRKWIEPKNLKLLNDNLSMVYVEPPIISTTIEHSKDNESIGNKDKKMERTHKRNFKKRKHIPSNNDFIEIFGQLKLDSKESLFDSIERQDDTFYVVSFSGDHLLLPASHNASNTTLRPKMSLVFPTLSSNGSDFVTMIQIDCAVTDTKTLHIRDTHLRHNNEFKNNVSSNLKQHNGHRNNIAHKPYFVRQSYSGSMFSKMNHELPSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304603;
- 90% Identity
- iTF_01304603;
- 80% Identity
- -