Basic Information

Insect: Scaptomyza tumidula
Gene Symbol: Znf639
Assembly: GCA_035044465.1
Location: JAWNNW010000486.1:802060-804556[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.046 3.2 8.4 0.3 3 23 306 327 305 327 0.93

2 10 0.017 1.2 9.7 0.7 6 23 336 353 336 353 0.99

3 10 8.8e-06 0.00063 20.0 0.3 1 23 359 382 359 382 0.98

4 10 0.00012 0.0086 16.5 0.5 1 23 394 416 394 416 0.98

5 10 0.0003 0.021 15.2 7.7 1 23 423 446 423 446 0.96

6 10 1.2e-05 0.00088 19.6 1.8 1 23 452 474 452 474 0.96

7 10 0.096 6.8 7.3 0.5 2 23 483 504 482 504 0.96

8 10 0.00012 0.0082 16.5 2.2 2 23 510 532 509 532 0.95

9 10 2.1e-07 1.5e-05 25.1 0.7 2 23 539 560 538 560 0.97

10 10 0.00019 0.013 15.9 4.4 1 23 566 589 566 589 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.046	3.2	8.4	0.3	3	23	306	327	305	327	0.93
2	10	0.017	1.2	9.7	0.7	6	23	336	353	336	353	0.99
3	10	8.8e-06	0.00063	20.0	0.3	1	23	359	382	359	382	0.98
4	10	0.00012	0.0086	16.5	0.5	1	23	394	416	394	416	0.98
5	10	0.0003	0.021	15.2	7.7	1	23	423	446	423	446	0.96
6	10	1.2e-05	0.00088	19.6	1.8	1	23	452	474	452	474	0.96
7	10	0.096	6.8	7.3	0.5	2	23	483	504	482	504	0.96
8	10	0.00012	0.0082	16.5	2.2	2	23	510	532	509	532	0.95
9	10	2.1e-07	1.5e-05	25.1	0.7	2	23	539	560	538	560	0.97
10	10	0.00019	0.013	15.9	4.4	1	23	566	589	566	589	0.96

Sequence Information

Coding Sequence: ATGATCTGTCGCTTGTGTTTAAAAAGCATAAACGCAAACAATGCCGTCTACCTGTTCGAAACCAACGACACACTGGCCGAATCCTCGCTGCTCAAGATTATAGCCAAGTATCTGCAGCTCGAAATAATGCCCGATGACAATATCTCTACAAACATATGCCACGACTGCTGCGAACATTTGGAGGACTTTAACAACTTCTGGCAACTGGTTGAGCAAAAACAGGGAACACTTAAAAAGGAGTTCCTTAACGTAGACGTCGACTGTGTGGCCCTTAAATGGACAGGTGGTATCGATGTTGATGTCAATATTGATGAGCTGCCGCTGGTGTCCGACGAGATGGACGAGAAGCCTTTAGATATACACAATCTTAGTTTGCTTGGCAGTGTCCTTGATGTGAATGTGGATAGTGTGGAGGTGCCGCAGCTTTTGGCTACACCAACACTTTCGCATAACGAACAGTTCCTGCACTCGCTAACTTCGAACGATAATGACGAAGACGATAATAACGACGAAGGCGTTTTGGATCAGAAACCTTTAATGAATGACAGCAGCGCAAGTTTGCTAAACACTTCGTCCGCCTCCgccgcctcctcctcctcaaATGATGAAGATGATGAAGTGCCACTGGTAAAGCTGCAGCACAAGCTAAAGCCAAAGCGAAAAGTACGCGGCGTGGCACGAAGGGAACAGCGCAGACTTACGCTTGCCCATGAACTAAATCAGTTGCTTGATAACAAAGGATGCGACGTTGGCAATCGAAGGCGAcgcaagagcaaaagcaacacaaatgCTGCACGAGCTGAGGCGCAAGAGACGGATCTGCAGGTAGCTGTGGAACGCAAACCGAAAGGTTGCTCTCGAGCGCAAATATCGAAACAGTATGAGGAGGCTATCGCCAGCTATATGAACGCCGACTGTGATCTATGTGAGTTTAGCACCAAGTACCTGTCCGAGCTAAAAGTTCACTTCATGGAGGTGCATCAACGCGATGGGTATCTCAAGTGCTGCAACAAGATCTTTCATCGCGCACCCAAGCTAATGGATCATATACGCAAGCACATCAATCCCAAGCTATTCACCTGTTCGATTTGCAACAAATCGCTTAACTCACAGGATTATCTGGCGACGCACATTGAGACAGTGCACAATAAGGTCGCCCAAATTGGCAAGGTGCTTAAATATCCGTGTCCAAAATGCGAACGCACCTTCAGCAGTGAAAGGCGTTTGGGCAATCATTTGCTTAAACACGACACGGATCAGTTGGAGCACAGTTGTCACATATGCCACAAAAGCTTTGCAAATGTGCATCGCTTGCGTCGACATATACAGTCGATACACGAGGATTTGCATCCGCATGTCTGCGATATATGCGGCAAGAAGTTCAAGTTTAAGCCATCGTTCGAACGCCATTTGCTGGAGCATCAGGGCGTTATCGGACCGGCCATGGAGTGTCCCGTCTGCGGTGTTTGGCTTAAGAACGAGCACAGTTTGCGTTTGCATCGCTTCACCCACGACAGCACCGATACTGTCTGCCCGCACTGCGCCAAGACGTGCACATCGCGTACAGCGTTGCGAGCTCACATCAAATATGCTCACAAACTGACCACAAATCTGCAATGCACATACTGTGAGAAGACGTTCAAGCAGCAGCGCAATCTTGAGGAGCATATGGCAATACATACCGGACTGCAGTTATATAACTGTCCACATTGTCCCAAGGAGTGCCGTTCGCGTTCCAACATGTATGTGCACATTAAGCAGCGGCACGCTGACGAGTGGCTCAAGGCCAAAATGGCACGTTCACACAATCCGCAGTTTAAGCCGCTTACCTaa
Protein Sequence: MICRLCLKSINANNAVYLFETNDTLAESSLLKIIAKYLQLEIMPDDNISTNICHDCCEHLEDFNNFWQLVEQKQGTLKKEFLNVDVDCVALKWTGGIDVDVNIDELPLVSDEMDEKPLDIHNLSLLGSVLDVNVDSVEVPQLLATPTLSHNEQFLHSLTSNDNDEDDNNDEGVLDQKPLMNDSSASLLNTSSASAASSSSNDEDDEVPLVKLQHKLKPKRKVRGVARREQRRLTLAHELNQLLDNKGCDVGNRRRRKSKSNTNAARAEAQETDLQVAVERKPKGCSRAQISKQYEEAIASYMNADCDLCEFSTKYLSELKVHFMEVHQRDGYLKCCNKIFHRAPKLMDHIRKHINPKLFTCSICNKSLNSQDYLATHIETVHNKVAQIGKVLKYPCPKCERTFSSERRLGNHLLKHDTDQLEHSCHICHKSFANVHRLRRHIQSIHEDLHPHVCDICGKKFKFKPSFERHLLEHQGVIGPAMECPVCGVWLKNEHSLRLHRFTHDSTDTVCPHCAKTCTSRTALRAHIKYAHKLTTNLQCTYCEKTFKQQRNLEEHMAIHTGLQLYNCPHCPKECRSRSNMYVHIKQRHADEWLKAKMARSHNPQFKPLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00610817;
90% Identity: iTF_01321359; iTF_01325818; iTF_01327323;
80% Identity: -