Stum005080.2
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- kn
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000444.1:6537493-6540548[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-119 1e-115 387.3 0.0 205 384 1 209 1 213 0.99 2 2 2.7e-06 0.0068 14.7 18.3 424 535 216 326 209 359 0.56
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGgtcgtcATATCCACCCAAGTGGCTGTTGATGGACCACTTTTGGCCATCTCGGATAATATGTTTGTGCATAATAATTCAAAGCATGGCAGACGAGCCAAACGATTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTTTATCCACCGCTACCTGTGGCGACACCCTGTATCAAAGCGATATCACCGAGCGAGGGCTGGACAACAGGTGGCGCCACTGTGATCATAGTAGGGGATAACTTCTTCGACGGCTTACAAGTGGTTTTCGGCACAATGCTTGTGTGGAGTGAGCTGATAACGTCGCATGCGATAAGGGTACAAACACCGCCCAGACATATACCGGGTGTCGTTGAGGTAACGCTATCCTACAAGAGCAAACAATTCTGCAAAGGATCACCCGGAAGATTTGTCTATGTTTCAGCACTCAATGAACCCACAATCGACTATGGATTCCAGCGGCTGCAGAAGCTAATACCACGACATCCCGGCGATCCGGAGAAACTGCAAAAGGAGATTATACTGAAACGTGCTGCAGATCTGGTCGAGGCACTCTACTCCATGCCCAGCAGATCACCCGGTGGCTCCACCAGCTTCAACTCCTATGCAGGTCAACTGGCCGTGAGTGTACAGGATGGCTCGGGGCAGTGGACAGAGGATGATTATCAGCGTGCCCAATCGAGCAGTGTTAGTCCACGTGGTGGTTACTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGCGGTTCGTATGGGGCAACGGCAACTAGCGCCAGCGTTGCAGCCAGTTCGAATGGTTATGCGCCTGCACCGAATATGGGCACACTCTCCTCATCCCCGGGTAGCGTCTTCAACTCCACATCAATGTCCGTGTCGACGCCTTGGCATTCGGCTCTTGTGCAGCATCATCATGTGTCCGCCgtcgccgccaccgccgccaccagcaaccatcatcatcattcgcaTCATCATTATCCGCATCCGCTTCAGCCTTGGCACAATCCGGCcgtaacagcagcaacagcggcggcAGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATSASVAASSNGYAPAPNMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHVSAVAATAATSNHHHHSHHHYPHPLQPWHNPAVTAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_01549315;
- 80% Identity
- iTF_01327626;