Stum004815.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- grh
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000444.1:4839830-4880775[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.56 4.9e+03 -3.5 1.1 95 105 186 196 172 223 0.47 2 4 2 1.8e+04 -13.3 16.1 59 109 647 698 588 748 0.43 3 4 0.49 4.3e+03 -3.3 2.5 107 127 960 976 934 993 0.50 4 4 5.3e-63 4.7e-59 199.3 0.5 24 221 1103 1295 1089 1297 0.93
Sequence Information
- Coding Sequence
- ATGTCCACATCCACGGCGACAACGAGCGTCATTACGTCCAACGATATATCGCTGTCTGCCCATCATCACGGCCACgcccaccaccaacaacaacaacagcaacagcaacaacaacactcgcacaacacacactcactgcacacacacaccacacaccgaTTGAGTGTGGGCGGCGTGAGTGTGGGTGGCGTTGTCGTTGGCGGCGTTGGCGGTCATCTTAGCGACGCCTCACTGTCACCCATACAGCAGGGTGCCAACATtgtggcaagcagcaacagctcgcCATTGGGCCAAAACGGCATACCACTACTCACCACCATGCATCGCTCCCCGGACAGTCCACAGCCCGAGTTGGCCACAATGACAAATGTCAATGTTCTCGATCTGCACACAGATTCGTCCAAGCTGTACGACAAGGAAGCGGTGTTCATCTATGAGACGCCCAAAGTGGTGATGCCACCCGACAATGGCAATGGCTCGAATAATGGTcatgatgatggtggtggtggtcaGGTGATAGATGCacgcatgcaacaacaacatcagcagcaacagcaacaacaacagcagcaacagcagcaacagcaacaggcacaGGAACATCAACCGCTGGCTAAGATTGAGTTCGATGAGAATCAAATAATACGCGTTGTGGGACCAAATGGTGAACAACAGCAGATCATATCGCGCGAGATCATCAATGGGGAGCATCACATCCTGTCCAGAAACGAGGCCGGCGAGCACATACTCACCCGCATCGTTAGCGATCCGTCCAAGCTGATGCCGAACGATAATGCTGTCGCCACGGCGATGTACAATCAGGCCCAGAAGATGAACAACGAACATCAGGGTGTCTATCAAACATCACCACTACCGTTGGACGCCTCGGTGCTGCACTATGGCAATGATAATGTGATCAAGACCGAGGCAGAGATCTATGAGGATCATAAGAAGCATGCGGCTGCTGGTGGCGGTGGTTCCATCATCTATACCACAACCGATCCGAATGGCGTCAATGTGAATGTCAAACAGTTGCCACATCTGGCGGGCGTGCCACAGAAACTCGATCCCGAACTCTATCAGACCGACAAGCACATCGATCTGATCTACAATGATGGCAGTAAAACTGTCATCTACTCCACAAGCGATCAGAAGGGTCTCGAGATCTATTCCGGCGGCGATATCGGCAGTCTTGTCTCCGATGGTCAGGTTGTGGTGCAAGCGGGTCTGCCATATGCCACAACCACCAGTGCCACAGGTCAACCCGTCTATATAGTCGCCGATGTTGAGGAACATTTGCAGGGGCGCTTTAGCCTggatcagcagcaacaaacgccGCCCCCGccgcaccaacaacaccaccaccaacacccacaacagcaacagcagcaacaagaacttcagcaacatcatcattatcccagtcatcatcatcatcatgatcatcatcatgatcattaTGGTAGTCAATCGCCACCGCATTACACATATGTGCCGCAAAAGGATGCAACAACACAGttagtgcaacaacaacaacaacaacaacatgtgcCACTAACTGCCGCTGGGCTCATGCAATCTGTCGCTGCCGAGATACAACTAAGTGAACAGCACTCGACACCACCACCCCCACCAACTCCCCACCTTCCACCACAACCACCCCAGGCACACGCctccaatgccaatgccaatgccaatgccagcTATGCTGTCTACAGCTACTATCGTCCCGATGTCGATGTGGATGtcgatgatgttgatgttgatgttgatcaacaacagcagcagcaacaggagcaaccacaacaccaacaccaccaccaccaacaacaacaacaacaacaacaagatcaaCAGCTACTGTGGAGcaaTGCGAGCAGCGCCGGCAAACTGAACGGCCAGACCACACCTATCGATGTCTCTGGTTTATcgcaaaatgaaattcaagGCTTTCTGCTTGGTTCACACCCCTCATCGTCGGTTGCCACAACTGGCGTTgtatccacaacaacaatctcaaatcagcaacatcatcagcagcagcagcagcaacaacaacagcaacaacaacaacatcagcaacatcaacaacagcaacaacaacaacaacaggcgaCACATCCCAGCGATATTGTGACCATAAGCACAGCGGGTGTGGGGAGCGCAGGCTCAATTGTCTCTGCAgccgtgcaacaacaacagcagcaacaacagcagcaacaacagcaattgctgAGCATCAAACGTGAACCCGAAGATCTAAGCAAGGATCCCAAGAATGGCAATCTGAGCGCCGCAGCAAACGGTGGCGGTTCAGTCATAACGCAAAAGATATATCGCGTGGATGCAGCTAGAACTGAAGTTGAGgcaagtgcaactgcaactgcttacgaaataagcaataaaacaacaacaacaagtgaaacTGCAACTAGTCCAGCCAGAGCCACACCCGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTACATTACAACGGATAGTTATGGCATGTATACGGCAACGAGACTGCCGCCCGGCCCACCGCCCGCCACCACATTCATAACGGAACCCTACTACCGCGAATACTTTGCACCCGATGGTCAGGGCGGCTATGTGCCCGCCGGTACGGCGCGCAGTCTCTACGGCGAGGATGTATCCGTTTCGGCAGCCACACAGCCACAGCCTGTGGGCGGCGTTTATGAGGCACGTTTTACCAGCAATGgtcccaccaccaccacagtGCTAACTAGCAGCAATGCacaccagcagcaccacagtcagcagcaacaacagcagcaacaacagcagcagcaacagcagcagcaacagcagcaacaacaacagcaacaggaacagtCGGTTAAAAACGGCGGTACTCCACTATATGCCAAGGCTATAACGGCGGCAGGTCTGACCGTCGATTTGCCCAGTCCCGATTCTGGCATTGGCACAGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGTAGCTTAATTGATGCTAATGGCAGCATACCCGTTTCAGTTAACAGCATCCAGCAGCGAACTGTTGTGCATGGCAGCCAGAATAGTCCAACCACATCGTTGGTGGATACCAGCACAAATGGTTCGACACGTTCAAGACCCTGGCACGACTTCGGGCGCCAAAATGATGCtgacaaaatacaaataccaaaaatCTTCACAAATGTGGGCTTCCGTTATAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTTGAATATGTTCACGATGCGGATAAGCCAATCAAAAATACAACTGTTAAGagTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGaTACAAAGAACTCGGTTGGTCTCGTCGGTTGCATCGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAGTGTTTGAGCACGGATTTTAGCAGTCAAAAGGGTGTTAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTCGAGGATCCACGGGATACGACAGTCTTTCATCGTGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCTGAGCGTAAGACGCGCGATGAGGAGCGTCGTGCCGCCAAACGTAAAATGACAGCAACTGGACGCAAGAAGCTCGATGAGCTCTATCATCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGATATGGAGAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCACCATTCTTGTTGCACGGTCAGAAGGTGGCAACGCCAACGCTCAAATTTCACAATCACTTTCCGCCCGACATGCAGACTGACAAGAAGGATCATATATTGGACCAGAGTATGTTAACCAGCACGCCCATGGCCGATTTTGGGCCACCAATGAAACGGGGCAGAATGACGCCGCCAACAACGGAACGCGTCATGTTGTACGTGCGGCAAGAGAACGAAGAGGTCTATACGCCGCTCCATGTGGTACCTCCCACCACAATTGGCCTGCTTAATGCGattgaaaacaaatacaaaatctcAACAACGAGCATAAATAACATATATCGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGACGATATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAACAAATCGAGGATGATCTGTACGATGTAACGCTCACGGAGCTGCCCAATCAATAG
- Protein Sequence
- MSTSTATTSVITSNDISLSAHHHGHAHHQQQQQQQQQQHSHNTHSLHTHTTHRLSVGGVSVGGVVVGGVGGHLSDASLSPIQQGANIVASSNSSPLGQNGIPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPPDNGNGSNNGHDDGGGGQVIDARMQQQHQQQQQQQQQQQQQQQQAQEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNEHQGVYQTSPLPLDASVLHYGNDNVIKTEAEIYEDHKKHAAAGGGGSIIYTTTDPNGVNVNVKQLPHLAGVPQKLDPELYQTDKHIDLIYNDGSKTVIYSTSDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSATGQPVYIVADVEEHLQGRFSLDQQQQTPPPPHQQHHHQHPQQQQQQQELQQHHHYPSHHHHHDHHHDHYGSQSPPHYTYVPQKDATTQLVQQQQQQQHVPLTAAGLMQSVAAEIQLSEQHSTPPPPPTPHLPPQPPQAHASNANANANASYAVYSYYRPDVDVDVDDVDVDVDQQQQQQQEQPQHQHHHHQQQQQQQQDQQLLWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSVATTGVVSTTTISNQQHHQQQQQQQQQQQQQHQQHQQQQQQQQQATHPSDIVTISTAGVGSAGSIVSAAVQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLSAAANGGGSVITQKIYRVDAARTEVEASATATAYEISNKTTTTSETATSPARATPDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHQQHHSQQQQQQQQQQQQQQQQQQQQQQQQEQSVKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTTVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMADFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -