Sred015145.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza reducta
Gene Symbol
nfxl1
Assembly
GCA_035044485.1
Location
JAWNNV010001369.1:201386-204459[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 1.7e+04 -8.1 6.4 15 19 148 152 147 152 0.82
2 21 0.13 1.1e+03 -0.3 0.4 4 10 183 189 182 189 0.95
3 21 6.5e-08 0.00056 19.8 15.5 1 18 197 213 197 214 0.98
4 21 1 9e+03 -3.2 2.7 6 10 240 244 239 244 0.89
5 21 9.7e-08 0.00083 19.3 17.0 1 19 250 269 250 269 0.98
6 21 1.2 1e+04 -3.4 0.9 5 10 293 298 293 298 0.92
7 21 2.1e-05 0.18 11.8 13.6 1 19 304 323 304 330 0.95
8 21 0.89 7.7e+03 -3.0 0.5 1 7 347 352 346 354 0.49
9 21 1e-07 0.0009 19.2 11.8 1 18 357 374 357 375 0.96
10 21 0.7 6e+03 -2.7 0.4 1 5 384 388 384 393 0.73
11 21 2 1.7e+04 -5.0 2.3 5 10 398 403 398 403 0.91
12 21 0.022 1.9e+02 2.2 15.9 1 18 409 426 409 427 0.94
13 21 3.3e-08 0.00029 20.7 14.7 1 19 436 454 430 454 0.90
14 21 1.1 9.4e+03 -3.3 2.0 6 10 482 486 482 486 0.98
15 21 5.4e-05 0.47 10.5 7.2 9 18 499 508 497 509 0.90
16 21 0.027 2.4e+02 1.8 5.7 1 11 521 530 521 531 0.95
17 21 1e-05 0.089 12.8 3.1 1 11 596 606 596 607 0.96
18 21 0.023 2e+02 2.1 15.4 3 19 636 652 635 652 0.92
19 21 2 1.7e+04 -6.1 4.1 4 11 657 660 656 662 0.55
20 21 6.8e-07 0.0059 16.6 11.8 1 16 703 717 703 723 0.90
21 21 0.48 4.2e+03 -2.1 0.3 11 16 753 758 753 759 0.80

Sequence Information

Coding Sequence
ATGGAAAAGTTTAATAAAGCGCAGGAAAAGAATTTGGCAGCCGCAAAAAAACTGGTAGATGCTTATGCATCAAGTTCGGAGGATGAAGGCGAACTGGATGAAAAACATATACTCGATCTACTATACAAGCATTATAAGTCTACGCCGGATAACGCGAGTGCCAGCAATAATGCAAATCGTACAGCTACGTTTTTGGAAAACACACTCCACTCGGGTGCGGCGACCTGTCTGATTTGCATTGGCAGCATCCGACGTGTGGAGGGCATTTGGTCCTGCAAGTCATGCTACTGTTTCTTCCATCTCAAGTGCATTCAGCGCTGGGCAAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAAAATGGCAGCCAGGGACACTACAATTATCTGGGCGAGTTTGTGCCACCAAAGCGTCCGAAAGCGTTACACTGGTGCTGTCCGCAATGCCGCACCGATTACCAGCCCACTGATCGGCCCACCCAATATGAATGTTTCTGCGGCAAAGAGGTGAATCCCGAGGCACAGCCCTTTCTAGTGCCGCACTCCTGCGGCGAGATCTGTGGCAAACTACTGCAGCCTAAATGTGGCCATGACTGCAAACTGCTCTGTCATCCGGGTCCGTGTCCCCCATGCGCCCAACTAGCGCATAGTTCCTGTCTGTGTGCCAAATCTCCCACACGCTCGGTACGCTGCATCGACAAGAATTGGCAGTGCCAGCAAACGtgtcaATCTTTATTGTGCTGTGGCAAGCATAAATGCAACCAAAGGTGCCATCGTCCTGGCCAGTGTCCCCCATGCAGTAGCAAAAGTTCCCAATTCTGCGATTGCCAACGTGAGCAAAAAGTTGTCAACTGCGCGGATCCCAAATGGAAgtgtaaaaatATTTGTGGCGCTTTATTTGATTGTGGTCTCCACAACTGCGATAAAGTGTGCCATGCTGCTCCCTGTGGCGGTGAATGTCCCTTAGGGGTACGCAGTTGCCCATGTGGCAAGAGCATCAAAACTGGAGGCTGCAGCGAAGTGCTGGAAACCTGTGGCGACACCTGCCAGAAGCTGTTGTCCTGTGGCAAACATAGCTGTGCCCAACGCTGCCATCGCGGTCCTTGCAACCTGTGCCTGGTGCGCACTAAGAAGAAGTGCCGTTGTGGGCTGCATGAAAAGGAGCTGCCCTGCTCCAAGGACTTTACTTGCGAAaccaaatgcaaactgatgcgGGATTGCAACAAGCATGCCTGCAATCGCAAGtgtTGTGGCGATCAGTGTCCGCCGTGCGAGAAGATCTGCGGCAAGCAGTTGAGCTGCAACAAGCACAAGTGTCAGAGTGTGTGCCACAATGGTCCCTGTTATCCATGCAAGTTGGAATCGCAGGTCAATTGTCGCTGTGGCAAGACACGACGCAGTGTCCCCTGTGGCAGGGAGAAGAGTGCGCGCATTGTCTGCCAGGAGCTCTGTCGCATCTCGGCTAAGTGTCATCATGCTGTGAAGCATCGTTGCCACAAAGGCGAGTGCCCTCCTTGTGCTCAAGTTTGTGGATTACCCAATAATACCAGCGGCTGTGGACACATATGCAAGGTGCGCTGCCATGCAGCCATACGTGTGCCCAAACCAGCCGATGCAGTGCGTCCGCATGCCAATAAGTACGAATACCGTGCACAGCCGCATCCACGTTGCGAGGAGGGTATTGTCGTAACCTGCATTGGTGGTCATGAGGTCGCCACCTGGCCGTGCTGGAACTCCAAGCCGTCGTCCTGTGCACGCAAATGTGGTCGCCAGTTAAAGTGTGGCAATCACAAGTGCGCACTGTTCTGCCATGCGGTGCCCAATCTGATGGATATGCAGCAGCAGGTTGGCTGTTCTAATTGCAAGCAGGGATGCGCTCTGGCTCGTCCTGCCGGCTGCACACATGCCTGTGCCAAAGGCTGTCATCCACCTCCTTGTGCGCCATGCAGTTCTGTTATCAAGCACAAGTGCCACTGCGGCCTCATTCAGGTCATTTACAAGTGCAACGAGTTCTTTAACCAAGAGGGATCGGTGCAGGAAATCCTGGAGCGCCGACAGAAGCTGTGCAGCTGCGGGAATCGTTGTTTGAAGAACTTTGCCTGTGGCCATCGCTGCATGACTATCTGCCATCCCGGCCCATGTCCCAATCCCGAGATGTGCCGCAAAAAAGTACGAATTTATTGTGCTTGCAAGCGCATGAAATTGGAGATTGCTTGCGACAAGCATCGAGCGGGTCAAACAACGTTGGATTGCGACGGCAACTGCCAAGTTCAACGTCAGAAGGCTGAAGCCTCGGAACAGGAGCAATTGGAGCTCCGTTTGAggaaggaggaggagaagaatCGTCGAGAGCTGGAGAAATTTGAGCAAAAGTTTGGCAAGCGTAAACCTAAGGAACGCAAAGCTATTGATGTGCAATCGACCAAATCCAACATCGACTGGAAACGTTGGGCCATCTATGCAGTGGCGCTCCTTGCGGCACTTGGCGCTCTAGCAGTAGCTTACTATGCGGAGAGTTAA
Protein Sequence
MEKFNKAQEKNLAAAKKLVDAYASSSEDEGELDEKHILDLLYKHYKSTPDNASASNNANRTATFLENTLHSGAATCLICIGSIRRVEGIWSCKSCYCFFHLKCIQRWANDSVMQMKVKAEQQNGSQGHYNYLGEFVPPKRPKALHWCCPQCRTDYQPTDRPTQYECFCGKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCAKSPTRSVRCIDKNWQCQQTCQSLLCCGKHKCNQRCHRPGQCPPCSSKSSQFCDCQREQKVVNCADPKWKCKNICGALFDCGLHNCDKVCHAAPCGGECPLGVRSCPCGKSIKTGGCSEVLETCGDTCQKLLSCGKHSCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKDFTCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRISAKCHHAVKHRCHKGECPPCAQVCGLPNNTSGCGHICKVRCHAAIRVPKPADAVRPHANKYEYRAQPHPRCEEGIVVTCIGGHEVATWPCWNSKPSSCARKCGRQLKCGNHKCALFCHAVPNLMDMQQQVGCSNCKQGCALARPAGCTHACAKGCHPPPCAPCSSVIKHKCHCGLIQVIYKCNEFFNQEGSVQEILERRQKLCSCGNRCLKNFACGHRCMTICHPGPCPNPEMCRKKVRIYCACKRMKLEIACDKHRAGQTTLDCDGNCQVQRQKAEASEQEQLELRLRKEEEKNRRELEKFEQKFGKRKPKERKAIDVQSTKSNIDWKRWAIYAVALLAALGALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01324578;
90% Identity
iTF_01323792;
80% Identity
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