Sred010305.4


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza reducta
Gene Symbol
srp
Assembly
GCA_035044485.1
Location
JAWNNV010000943.1:43267-56448[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-18 8.3e-15 54.1 2.7 1 35 944 977 944 978 0.97

Sequence Information

Coding Sequence
ATGACAAAAACCAGCAAGACAAAAGTAAAGGATAAAAGTAGTATTGCAATGCCGCGTTTGCCAAGCAATTTACTGGCGAGTGCTGCCAAAATGAAGATCAGCAAAGCCCTGGCCAATACCAAGAAGCAAGCAGTGCAAAAAGGCGCCAGCGCCGGCGCCGGCGAcaaagcgacagcaacagGATCAAATGCGGCAGTAGCCACAGCACtagcagcgacaacagcatACATTCAACAGGCGGTCGTTGTGAAAGAGACGGCAATAGCGGTGCTGCAGGAGAACGGCAACGCTGCGCACAAGCAGTCAGCAGCGACGCCGACGTCGCCGCTTGCCACAGCGAATTTATTGTCGACATTTGAGTCGAAGGCTCATACATCAGTTGCCAGCGAAACAGCAAAGCAAACGGTTACCAGCGCAACAATAGCAacggcgacaacaacatcaacatcaacaattgcAAATTCAACGATCGGTTTTGTTTATGATGAGAACAACGTAGGTTGTGACgtcacaaacaaaattattgcaGACGAAACGGCTAATAATAACAACCCAGATAAAGTCGAGCCCAAAAACGAAAGCGAAACGAAGCTAGTTGTAgagacagcaacaataacaggagcatcaacaacagcgagcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTGATGAaaacacaacaccaacagcaatagctaaaataacagcaacaacatcaggtGTTTTGCCGGCTGTAGTGATAAATAGTAGTAATCAGCAAAGCGACGCGagtgaaagtgttgacaacaaaattaaaagtgaAGCAAACGAGCAAGAacaaactgcaacagcagcagcaggaacatcaacaggaacaacaataacaacaacaactggtgAATTTCCGCAGCATTATCGTGGGCTAAACAATTCGGTGATTATAACCAATTATGCGCACCagaatcagcagcaacaggccgaacaacaacagcagcaacaaatttatgagcagcaacaatacctgcaacagcaactgctaaaccaacagcagcaacatcaacagcaacaggaacaacaacagcacgcCACTTGGTTGGCCTACGGCAATTGTGCCTACGATTtaactagcagcagcagtgcagcagcagcagcagcactggcCTCACAGCAACTGTTGGCGCATTTTCCCTATCATCATCCCCACGCGCATTTGTAcgagccgcagcagcaacaaagcaatCAAAGcgccaacggcaacagcaccagcagcagcacggaTCCCATAATGCGCAACAACTTTACGCTGTACAGCGTTTATGGTGGTGTTGgaggtggcggcggtggtgctGCCATCACGCCCACCACAcacgagcaacagcagctgcagcaacatgttgccgctgtggcaacagcagcggccAATTCGGTTATTGCACACACAACGCATGCACAAACACCCAATATTGATGAGGTCATCCAGGACACACTGAAGGACGAGTGCTTCGATGACAATCATAGCTCCAGCTATCACATGCTGACTGCCGTCTCCGATTTGCAGGTGTTGAAGGAGGCAAATGCAACCATTTATTCCATGACGCACGATCAGTTgcttcagcaacagcagcaacagcatcagcaacatctacaacaacatcatcatcatctgcagcaacagcaacaccagccgcagcagcagcatacgcatcatcatcaacataaCCATCACAACAATTCGGCCAGTTCGGTGGGTGGCGATTCGCCGTCTccttcacacacactcgcCGCCGCTGCACATGCCAGCGATGTGGCAACGCTACAGAGCTTTACCCAATTAACAAGGACGTCTCCCAGCAGCGGCTTGCATCCCGATAGCTACGGCAGCTTCTCACCCGAACATGCCGGCTACTTTACCACACCGCTCAGCCCAGTGTTGCATAGCAGcTCGGTATATGCAAGTCCTTTGCTCGCCTCAGCTGCCAATGGCTTGCAGTATGGCATGCAGACGGTGTCCTCACCCACccatctgcagcagcaacatcaccagcaccaacagcaacagcagcagcaccaacaacagcaacaacaacaacaacaacatcaccaaCATCACAACTCGAAAAGCAGCAGTCCTGGTCCAGTTGGTCAACTCCACACGAGTGCCTCAACAGCAGCTGGACACAGTTCGCTACTAGACGATGGCTATGGCTCACCAAAGAGCAGCCACAGTGGCAACGGCGGTGCCAGTGGTGGCACGCTGCCAGCCTTTCAACGCATTGCACCCACCAGCGGTGGTGCTGGCTACGGCAACGGCGTCGCCAATGGATCTGGCAGTGTTGCCGAACGAGCTGGCTACGCATCGCTGGCCAATTATCGCACTCACGGCGATGCCTGGAGTGGTCACTATGAACCAATTGGCTACGCGTCCAGTGCCAGCAGCCAGGGGCAGTTGGGTGGCAGCGGTGCAGCGGTTACAAATGTGATACGCAATGGACGTGTTGttgccgccgcagcagcagccgctgctaCTGTCGATGGTGCCGCCAATGCTCTCGATCCTGCACGATCATATCTCGCCACCGCCGCTCATCTCTCCGCATCGGCATCGCTAACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGCCCTTCCCATTAAACGTGGCCACCGGTAGCCGCAGTAAGGCCACAACAAATGCCAACAGCGCTGCCGGTTCCGGCGCAGGTTCAACGTCAGCAACAACGTCGTCAGCGGCTTCAACGGCGCACGACGAGCACATTAGTCGCGCCAATTCGAGACGCGTGAGCGCCTCCCGACGTGCTGGCATGTCCTGTTCCAACTGCCAGACAAGCTATACATCGCTGTGGCGTCGCAATCCAGGTGGCGAGCCCGTTTGCAATGCCTGCGGTCTCTACTATAAGCTGCACAATGTTGTGCGTCCGCTGACCATGAAGAAGGACACCATTCAGAAACGCAAACGTAAGCCAAAGGGCACTAAGAGCGAAAAGTCAAAGAAATCGATGCGATCTTCCCAAACGGCTTCAATGGTTGCCACCAATGCCAATGTGGGCATGCAACTCGATGGCCATGGCCAGCAAATGGATGTCAATGATGAAATGAAACCACTTGCATATATGTCATCATACgcattgcaacagcaacagcaacagcagcagcagcagcaacagctacaacagcaaACGCAACTAAACATTGAGCAACATTCATCAGCGGCCAGCTCACCGCAAAGCATGGCATCATCCTCATTATCACCCAATGCAACATctcaacaacatcagcaacatcagcaacagcaacaacagcagcagcagcaacaacaactttgtgcTGGCCTGGACATGTCGCCCACATCCTCCTATCAAATGTCGCCCATtaacatgcaacagcagcagcaacagcaatcatgcagcatgcagcattCACCTACTACGCCCACATCAGCAATGTCACATTCCATTTATTCCACACCATCGCCCACGcagcttaacaacaacaatttactATTTaatcacaacaataacaacaatatttgcaatgagaataacaaacaaattatacaGAAATATCTGGAAGCTCAACAATTGAGCAACAGCGATCAACAATTATTGGCACAGCAGCAACTTATGCACCTGATGCCGAACTCCCTTacggcagcagctgcggcagcagcagcagcagcggcggccaTCAACACGGCGATCAAATCGGAGTCGGCCGCCAAcaccaacatcaacagcaacagcagcaaacaattggctgccacaacaacaacaacaccgacCACGGCATCGAACACACTATCCTCACTgagccacaacagcagcaacattatcAGCCTGCAAAATCCATATCAACAGCTTGGTCAGACAGAGATGCCCTTGTGTAAATCGGCGCTAAGCGGACGCACCTCATCCCCCTACTATCATCTAGCCGACGAGGAGCACCCGTCCATCATAAAACTGGAGCAAAtggatcaacatcaacaacatcagcaacatcatcaacaccagcaacatgaTGAACTTCTGCTTAGTCGCTCAACATCCATTGACGAGCACTACGAACTGGCCGCCTATCATCgccaacaattgcaacagcagcaacacaatctacagcagcaacatgagcAACAGATTGCCAGCTATGCGTTGCATGCAGCtgcgcagcagcaactacatgAATTTGGACGCAAATATGGCGACGAGCACGAGACAATTGTTAAAATGGAGTAA
Protein Sequence
MTKTSKTKVKDKSSIAMPRLPSNLLASAAKMKISKALANTKKQAVQKGASAGAGDKATATGSNAAVATALAATTAYIQQAVVVKETAIAVLQENGNAAHKQSAATPTSPLATANLLSTFESKAHTSVASETAKQTVTSATIATATTTSTSTIANSTIGFVYDENNVGCDVTNKIIADETANNNNPDKVEPKNESETKLVVETATITGASTTASDKYYKIVDKCKSEISDENTTPTAIAKITATTSGVLPAVVINSSNQQSDASESVDNKIKSEANEQEQTATAAAGTSTGTTITTTTGEFPQHYRGLNNSVIITNYAHQNQQQQAEQQQQQQIYEQQQYLQQQLLNQQQQHQQQQEQQQHATWLAYGNCAYDLTSSSSAAAAAALASQQLLAHFPYHHPHAHLYEPQQQQSNQSANGNSTSSSTDPIMRNNFTLYSVYGGVGGGGGGAAITPTTHEQQQLQQHVAAVATAAANSVIAHTTHAQTPNIDEVIQDTLKDECFDDNHSSSYHMLTAVSDLQVLKEANATIYSMTHDQLLQQQQQQHQQHLQQHHHHLQQQQHQPQQQHTHHHQHNHHNNSASSVGGDSPSPSHTLAAAAHASDVATLQSFTQLTRTSPSSGLHPDSYGSFSPEHAGYFTTPLSPVLHSSSVYASPLLASAANGLQYGMQTVSSPTHLQQQHHQHQQQQQQHQQQQQQQQQHHQHHNSKSSSPGPVGQLHTSASTAAGHSSLLDDGYGSPKSSHSGNGGASGGTLPAFQRIAPTSGGAGYGNGVANGSGSVAERAGYASLANYRTHGDAWSGHYEPIGYASSASSQGQLGGSGAAVTNVIRNGRVVAAAAAAAATVDGAANALDPARSYLATAAHLSASASLTAMAAESGGDFYKPFPLNVATGSRSKATTNANSAAGSGAGSTSATTSSAASTAHDEHISRANSRRVSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYYKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKSMRSSQTASMVATNANVGMQLDGHGQQMDVNDEMKPLAYMSSYALQQQQQQQQQQQQLQQQTQLNIEQHSSAASSPQSMASSSLSPNATSQQHQQHQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQQSCSMQHSPTTPTSAMSHSIYSTPSPTQLNNNNLLFNHNNNNNICNENNKQIIQKYLEAQQLSNSDQQLLAQQQLMHLMPNSLTAAAAAAAAAAAAINTAIKSESAANTNINSNSSKQLAATTTTTPTTASNTLSSLSHNSSNIISLQNPYQQLGQTEMPLCKSALSGRTSSPYYHLADEEHPSIIKLEQMDQHQQHQQHHQHQQHDELLLSRSTSIDEHYELAAYHRQQLQQQQHNLQQQHEQQIASYALHAAAQQQLHEFGRKYGDEHETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01328262;
90% Identity
-
80% Identity
-