Sred001960.2
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- RERE
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000191.1:2130120-2139146[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 0.00015 21.7 0.2 2 45 125 169 124 170 0.87
Sequence Information
- Coding Sequence
- ATGGCGGCCTCCACTCAAGGAGAAATACGAGTGGGTCCCGGCCACCAGGTAAACGATGTCTATGCAAAACTGCCCGATTATAATCCAATCTCAAGCTTCCCCGTTGACAAGGAAACCGATGAACGTGAATTAGAGGAAACAAGATGGAGTCCTGGCGTTGTGGCCGATGGCGActtgttaatgtttttgcGTGCGGCACGCTCCATGGCTGCATTTCAAGGAATGTGTGATGGCGGACTAGAAGACGGTTGTTTGGCTGCCAGTCGCGACGACACAACAATTAACGCACTTGACGTGcTACACGATTCTGGTTACGATCCAGGTAAAGCTCTACAAGCGCTCGTAAAGTGCCCCGTTTCAAAGGGCATCGATAAGAAGTGGACCGAGgacgaaacaaaaaagtttatcaAGGGTCTACGCCAATTTGGCAAGAATTTCTTCAGGATCCACAAGGACCTGTTGCCACACAAGGACACACCGGAGCTGGTCGAATTCTACTATCTGTGGAAGAAAACGCCCGGCGCCAATAACAATCGCCCGCATCGGCGACGCAGACAGAGCACATTGCGTCGCAATCGTGTTACGCGAGCTAACAACACACCTCCCAAGAAGGAGGACACCCCGGAACCACAAGCTgcgacgacggcgacggcggcggcgtcgGCTGCAGAGACGGCGAGTCGCTCATCGCCCGCTGTCTCCAAGGAGGAGAACAGTTCTCTAACCGAGGACGACGCCAGCGAGTGTGACAGTGATTCGAGTCTGACTAACAAAAGGGATGAATCACCCTCTAGGATGAGGACGAGAAATAaacaacagaacaacaacaataacaacaacagcagcagcgccagtgCAGCTGGTGGCGGTAACAATTCTAcagccgctgcagctgctgccaacgTCAACGCCACTGGCAACAGCTCCTCCAAGGAACAATCCTCGGGCTCAGCGAGCAATACCGGCAACGCGGTGGCGAACGGCAAGCGACCAAAGCGCGGATCCGATACACCGgatgccgccgctgctgcagccgctCCTGGTGAGAGTCCCAAGACGCCCACCAAGAGTGTGGCCGAGGGTTCGGGCAACAAGCGCAAGGGCGGCAAACAGGACACGCCCAACAAGAAGAAGCGCACCGAAGCGGagaccaacaacagcagcaatgagcaaacgaacaacagcagcgaggACAACATCAAGGAGAAGCAACGGAAGCGTCCGGACAGCCCAGTCGAGAGCATGAACTCCGACAGTCGTCCCGATTCTGTGCTTGACGATGGCGAATCGAATGCAACAGATACGGATGGACGCACTGCGGATCAGCAGGCCAATAAGGATGGCAAGGAGATTAACTGCAAGGAGGAGAGCGCTGTAACGCTCTCGGGTGATCAGGACTCCAAGGCGGAGCTCAATGAGAAATCGATCAAAACGGAAATATCGTGCGCCGATGATAGCAAAGACACCATCAAGAATATGGACGAGGAGACTAACATACTGGCACCAAGCAACATTCAGCCACTTAGCCTCAAGCCCGCCCACGTGGATGGTCTGCTAAAGGAGTCCAGCTCATCTGAGGTGCCACCGCCAACGCCTGTGGTTGCTCCCATTGCCATGAAGGTGGCGACCGTGGAGGCGCTCAATGCATCGGTGGATCGTGATCGCAAGGAGACCATTGAGAAGATGGAGATGTGTGAGAATGaggtggcagctgcagcagcagcagccgccgccgccgcagcggcagcagcggtACGTGATCCCGAGCTGCTAAAGAAGCTTGCCAGCATTAAGCAGGAAGCGTCTccccagcagcagcttcaacagcagcagcagcagcagcatcaacaacagcagcatcaacaacagcagctgcaacagcagctgtcaAATGTGCCACCAGTTTCAGCTGGCCCTGGGCCAATGCAGGAGGCTGTCTACATCAAAAAGGAGCCCATGGAGGATTCAATGGACGCCACATGCAATCAAAACAGCAACGAGCCGCAGGATCTCAAGGtcaaaatcgaaatcaaaaacGAAGATATGAAGTTGATTACCGGCGGCAATTTACCGCCAGTCAACTCGGTACCACCGCCAAATTCCCAATTGACTGGTGGCATGCATCACAGCAATGCTGGAGATGGTGTTGGTCCCGAGCCAATGCATCTGCAGCATATGCAGCACGGGCCGACGCCTCAGGCGCCTGCCGGCTACCTAATTGATGGACAGCTGAAGTATGGTCCTGGGCCCGGGCAAGCGCCACCACAGCTTCCGCCACAGTTGCACAGTGATCCGGGCAGTGGACCACCGCCTGCAGCACCACAAAAGTATCCCGGTGATATGGAAATGAAGTACAACGAGGCTGCCGTCAAATTTGAGCCCAACAGCGGCAAGTTTGCGCCACAGGAACTGAAGTATCAGGTCCCGCCACCGCTCGACGCCTTGAAGTACAGCCAGGAGatgcaggcagcagcagccgcggcAGCAGCTGTGGGCAAATTCGACATGAAGTATATGATCGAACAACAGGGCAAGTATCCCGTGGAATTGGCGCCGCCTAAACCCGGCTACCAGGAGGCACTCAAGATACCCGATGTTAAGCCTGGCTTTGCGCATCTTCCACACAACATTGGTGCCTCCATGGACGGACCCGGTCCGCACAAGTATGCGCCTGGTGGACAAGGACCCGGACCACCGCTGGATCAGCAGCCACCAGGTGCAACGCCACCACCGGGTATTGCCATGCCCAAGCCGCATTATCAGCATGATGTTCAGACACCACCACTGGGTCGACCGTTTGAGCCCACTGGTCTTATGCTCAAGTATGGTGATCCATTGGCCGCCAAGTATGGTCCGCAACAGCCGCAGGATCTCAAATTTCCGATGCCTCCCGGCTCTGCTGCAAGCGGTGAGAATCTGATCAAATCGTCGCCGTATGGCCCGCCGCCAGAGAGTCCCATTGATGCGTCGGCACGTTCCACGCCCGGCCAGGATAGTCAgggcagcaatagcaatagcaattcGCAGCCACCATCCTCACAGCCGCAGCAGTTCCAGTCGCCGCATCCCTCGCCACACATGCCTTCGCCCGCTGGCGGTGGCCTTCCACCCGGCATGCATCCGCAAAATCTCATCTCCCCGCACAGCCACGGCCTGCCTCCGAATAGTGGTGCCGGCTCCGGTCCTGGACCACAGCCTCCAACGTCGTTGCATCAGCCGTTAAGCAGCATCGTGCCAGGTCAGGGACCACCCAGCCTGCAGCATGGGTTGCCACCTGGTCCAGGCGGGCCACACGCACAAATATCGGTGGCCTCGTCGCTATCGGGTCTCTCGTCACTTGGTGCGCCAACGTTGTCGACAATGGCGCCATCGCATCCCATGCACCCGCACATGCATCCACATCATCAGCATCTGCAGTCGCTACAAGCCTTGCATCGGCCGCATCCCGACCTGCCGCCATCCATGCATCCGCATGCTCCAATGGCGATGTCACTGCAGGGTCCGGGTCCGCCGCCGCCGCACGGCCATGTTCATCCACTGGCGCCTGCACacgcacagcaacagcagcctgGACCTGGTCCTGCGGGAACAGTGCGTACACCATCTCctgcacaacagcagcagccaccacGTAGCCTGCACGACCAGATGCCCACATCACGTGAGCCGCCCTCCTCGCACACATCGACGGCGCCAACGAGTGGTGGAGGACCGGGCCAGGGACCGGGACCGGGACCAATACCGCATCAGTCACCGCATACGCATCGCACATCGCCGTTGCCGGGTCTGGCGCATCCGGCGGGGCTATTGGGCCATCCAATGCCCATACATCCACACTTGGCGCATCTGCAACCGGGTCATCCGGCACACGCAGCACTGGCGCACCCTGGCCATCATCTGCTCTCGCATTCAATTGCGGGCTTAAGCCATGGTGGCGGTCCCATTGCGCTCCTAGCAGGTCCTGGTGGTCTCGGCGCCTTGCCCGAATCGGCACTCAGTCGCCGCACACCGCCCAGCCATCTGTCGCATCCACACGCTTCGTCAGCGCCATCGACGCCACATTCGGCGGCCATATCAACGAGCATGTCGCTGAGCACAACACCCAGCACGGTGCCATCGTCCGCCTTCAGTCGCGCCAGTCCAAGCGTGCAACTTTCGAGTGGTGCCGCTCCACCTGGTGGCCCtggtggcaacagcaacagcggcacGCCCAATAACTCctcggcagctgctgcagctgcagccgctgcCCATCGTGCAGCTTCACCGGCCTCTAGTGTGGGCAGCATGAGCCGGCAGAGTCCGCTGCATCCGGTGCCACAGTCGCCGCTGAGTCATCATCCCTCGTCGTCGGCTTTGTCTGCCGCAGCTGCGGCCGTTGCCGAACGAGATCGCCATGCGCTGATGCGTCAACAGTCGCCGCACATGACTCCGCCACCAGCGTCTAGCGCTTCCGGCCTGATGGCCAGTCCGCTCAGCAAGATGTATGCACCGCAGCCGGGGCAGCGGGGATTGGGTACCTCGCCACCGCCTCACTTGCGGCCAGGTGCCTCGCCACCGGTTATGCGTCATCCACAGATGCCGCTGCCATTGCCACTGATTGCACCGGGCGGCGGCATGACACAAATTGGTGTGCATCCCGGCCAGTCGCCATATCCGCATCCGCTGCTGCACCCCTCGGTCTTCTATTCGCCGCATCATCACAATCCCTTCAACTCACCCTATGGCTATGCGCCCTACGGACCAGGCTTCCCCGCCTACATGAAGCCACCGCCGCCAGCCGGCCCTCTCGATCCAGCGGCTGTGATGGCCGCACACCATGCCGGTCTGACTGGTCCCCCGCCACAAGCGCGTCAGGATGAGCAGaatgcagcagctgcggcagcAGTAGCCGCCGAAAAGCATCAGCATGCGgcggctgcagcagcggcagcagctgctgctcaacaacaacagcaacacaagacgccccagcaacagcagcagcaacatcaacagcagcaacaacaacaacagcagcagcagcagcaacaacaacagcagcaacaacagcagcagcaacaacagcaacagcagcagcagcaacaacaacaacaacatcagcagcaacagcagcagcaacaacaacaaaatcagcagcagcagcctggAGGACCGCCACTGAACAAGCCGCCAACGCCAAAGACGCCGCAGGGTCCGGGAGGTATAGGTGTCGGCATGGGAGGCCCGGGAACGCCCACAGGACTGCCGCCTGGTGCCTATCCAGGTTCGCATATACCTGGCTATCCACCACCGCCGCATTCATCACCCTTTGCGCCGCAGGATGGCCATGGCATGAAGCCAACGATCTCCCACATGGATGCATTGCGGGCGCATGCTCACTCAGCCAACTCGGCTGGCATGGGCGGTTCACATCATCCGACAGAGTCATTGCCCATTGACATTGAGCCCGATCCAGAACCAGAGATACCCAGccccacacacaacatacagcGGGGTCCAAGTCCCGAGGCGAAACCCGACGATACCGAATGCCATCGTTCACAGTCCGCAATCTTTGTGCGTCACATTGATCGCGGTGACTATAACTCGTGCACGCGAACGGATCTGATCTTCAAGCCAGTGACTGACTCGAAGCTGGCGCGCAAACGCGAGGAACGCGACCGCAAGCTGGCTGAGAAGGAGCGTGAGCGACGACAAcaacaacaacagcagcagcagcaacaacaacagcagcaagcagctgcCGCACAACAGGCTGCCCAGCAGGCCAAAATGAAGGCCGAGCTGAAGCCACCGTATGCGGATACGCCGGCGCTGCGCCAACTGTCGGAATATGCGCGTCCACATGTCGCCTTCAGTCCTGTTGAGATGCCTTATCATCATCCAATGGGCCCAATGTACAGCAGAGAGAGAGAATTGGAGGAGATTAAGAACGCACAAGCGGCTGCAGCAAGTCAATCGCGAATAGATCCTCATTGGATGGAATACTATAGGCGTGGCATACATCCTTCACAGTTTCCGATCTACGCAAACCCGGCTATTTCACAAATGGAACGCGAGCGTTTGGGCATACCGCCACCGCATCATGTTGGCATGGATCCGGGCGAGCACATGATACGATTGACGAGAGAATATCATGCACACTCTCATACTCATTTACATTTGCCTTTGCATCCACAGCCGCAACCACCGGAGGCCGGTTTCCAACTGCCACCGAATGTTGGGCAATATCCTCGTCCAAATATGCTTATACCTAGAGAGCCGCACTCGGACGTTTTGCTGCGCATGTCGTATGCGGATCAACTACAGtatTTACAGGCCGCCGAGTTTCAACGTCAATCGCTGCACGATCAATATTTCAGGTAA
- Protein Sequence
- MAASTQGEIRVGPGHQVNDVYAKLPDYNPISSFPVDKETDERELEETRWSPGVVADGDLLMFLRAARSMAAFQGMCDGGLEDGCLAASRDDTTINALDVLHDSGYDPGKALQALVKCPVSKGIDKKWTEDETKKFIKGLRQFGKNFFRIHKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQSTLRRNRVTRANNTPPKKEDTPEPQAATTATAAASAAETASRSSPAVSKEENSSLTEDDASECDSDSSLTNKRDESPSRMRTRNKQQNNNNNNNSSSASAAGGGNNSTAAAAAANVNATGNSSSKEQSSGSASNTGNAVANGKRPKRGSDTPDAAAAAAAPGESPKTPTKSVAEGSGNKRKGGKQDTPNKKKRTEAETNNSSNEQTNNSSEDNIKEKQRKRPDSPVESMNSDSRPDSVLDDGESNATDTDGRTADQQANKDGKEINCKEESAVTLSGDQDSKAELNEKSIKTEISCADDSKDTIKNMDEETNILAPSNIQPLSLKPAHVDGLLKESSSSEVPPPTPVVAPIAMKVATVEALNASVDRDRKETIEKMEMCENEVAAAAAAAAAAAAAAAVRDPELLKKLASIKQEASPQQQLQQQQQQQHQQQQHQQQQLQQQLSNVPPVSAGPGPMQEAVYIKKEPMEDSMDATCNQNSNEPQDLKVKIEIKNEDMKLITGGNLPPVNSVPPPNSQLTGGMHHSNAGDGVGPEPMHLQHMQHGPTPQAPAGYLIDGQLKYGPGPGQAPPQLPPQLHSDPGSGPPPAAPQKYPGDMEMKYNEAAVKFEPNSGKFAPQELKYQVPPPLDALKYSQEMQAAAAAAAAVGKFDMKYMIEQQGKYPVELAPPKPGYQEALKIPDVKPGFAHLPHNIGASMDGPGPHKYAPGGQGPGPPLDQQPPGATPPPGIAMPKPHYQHDVQTPPLGRPFEPTGLMLKYGDPLAAKYGPQQPQDLKFPMPPGSAASGENLIKSSPYGPPPESPIDASARSTPGQDSQGSNSNSNSQPPSSQPQQFQSPHPSPHMPSPAGGGLPPGMHPQNLISPHSHGLPPNSGAGSGPGPQPPTSLHQPLSSIVPGQGPPSLQHGLPPGPGGPHAQISVASSLSGLSSLGAPTLSTMAPSHPMHPHMHPHHQHLQSLQALHRPHPDLPPSMHPHAPMAMSLQGPGPPPPHGHVHPLAPAHAQQQQPGPGPAGTVRTPSPAQQQQPPRSLHDQMPTSREPPSSHTSTAPTSGGGPGQGPGPGPIPHQSPHTHRTSPLPGLAHPAGLLGHPMPIHPHLAHLQPGHPAHAALAHPGHHLLSHSIAGLSHGGGPIALLAGPGGLGALPESALSRRTPPSHLSHPHASSAPSTPHSAAISTSMSLSTTPSTVPSSAFSRASPSVQLSSGAAPPGGPGGNSNSGTPNNSSAAAAAAAAAHRAASPASSVGSMSRQSPLHPVPQSPLSHHPSSSALSAAAAAVAERDRHALMRQQSPHMTPPPASSASGLMASPLSKMYAPQPGQRGLGTSPPPHLRPGASPPVMRHPQMPLPLPLIAPGGGMTQIGVHPGQSPYPHPLLHPSVFYSPHHHNPFNSPYGYAPYGPGFPAYMKPPPPAGPLDPAAVMAAHHAGLTGPPPQARQDEQNAAAAAAVAAEKHQHAAAAAAAAAAAQQQQQHKTPQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQNQQQQPGGPPLNKPPTPKTPQGPGGIGVGMGGPGTPTGLPPGAYPGSHIPGYPPPPHSSPFAPQDGHGMKPTISHMDALRAHAHSANSAGMGGSHHPTESLPIDIEPDPEPEIPSPTHNIQRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVTDSKLARKREERDRKLAEKERERRQQQQQQQQQQQQQQAAAAQQAAQQAKMKAELKPPYADTPALRQLSEYARPHVAFSPVEMPYHHPMGPMYSRERELEEIKNAQAAAASQSRIDPHWMEYYRRGIHPSQFPIYANPAISQMERERLGIPPPHHVGMDPGEHMIRLTREYHAHSHTHLHLPLHPQPQPPEAGFQLPPNVGQYPRPNMLIPREPHSDVLLRMSYADQLQYLQAAEFQRQSLHDQYFR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568194;
- 90% Identity
- iTF_00609826; iTF_01321860; iTF_00543685; iTF_01325605; iTF_00573991; iTF_00619783; iTF_00485802; iTF_00495055; iTF_00548746; iTF_00508267; iTF_00498093; iTF_00499526; iTF_00577004; iTF_00542381; iTF_00518382; iTF_00593041; iTF_00557148; iTF_00497326; iTF_00521294; iTF_00566734; iTF_00511215; iTF_00564593; iTF_00516934; iTF_00616140; iTF_00501745; iTF_00535252; iTF_00582900; iTF_00527990; iTF_00552246; iTF_01327830; iTF_00597303; iTF_00513401; iTF_00570338; iTF_00538169; iTF_00500250; iTF_01320410; iTF_00496541; iTF_00498813; iTF_00576286; iTF_00482175;
- 80% Identity
- -