Sred004465.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- mier1
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000460.1:245372-247187[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-08 8.4e-05 22.6 0.3 3 46 383 427 381 427 0.93
Sequence Information
- Coding Sequence
- ATGGCGGGACGCGATGTTACAATCACGCCATCCGAGCGCCGCAAATCGCCAGGAATGAGCTTGTGCTCGGAAAGCAGCGGCACAGAGCCGCCACCAATGTCGCCAACATCATCCGTTACAGACACTACATTCGAGCCAACGATTGATATGATGGTTAACGATTTCGACGATGAAGCCACACTGAACGAGGAAGAGGCGCTGGCGGACATGGAGGCGCATAATGCCGATGATGAAATAACCACACTGCGTGAAGAGAGCGAAATGCCCATTGAACAGCTACTGGCCAAGTACAGAAGCATGACAAATGTAAACCTGTCGACAGTCGCTTTACCAAGCAGCAGTTCAAGGAGAAGGCGCGCAGCGAAGAGACAGCTTCATAACGCGGATGTGGCCAACACAGCTTCCGCGTCCTCGACTGAAGAGCCGCAGAATGTTGAAGTTTTAAGCCCAGCTATGAACTATACCTCAATTCAGTTCAATCAAGATGTGGGGGACAAGGATGAAGATTTGACGCATGAGCTGCTGCCAGAAGTGACCAAGACACAGCATCGTTCGCATTTATTGGATCTATATCCCGACGAATCCTTTGGCGGCAGTGCACCGCACACAATAAGCAGCGCGGAAAACTTTGGAAGCTTTACGCCGCTGCAGACGCTTTTCGAAGAGGTGGAGGAGGCCAGGTTGGAGGAAGAGGACAGTGATACGGATTCGGATGGTGCTAGGAAAAATATAATGGTCGGATCGGATTTTCAAGCGGAGATCCCCGAAGGTCTCTCCCAATATGGCGACATATTGCCATATGAGAATGAGGATCAATTAATTTGGGAACCCAGTCAAGTCAGAGAACGGGAAGTGGAGCATTACTTGGCTCTAATACAGGAAACTCAACCGTTAAGCACAACCGCAGATGATGGCAGCGAGGCAGCTGCAGTCGGGTGTCCACAAAGTACAGATGCGATTGAAGATATTGTGGCAGCTCCAAttccaactgctgctgctgccacaggaGCTTCCAGTTCCAAGATGGAATCTGTTATCAAGGACAACGAACAGGCTTTGCATTTACTGGTGCAATGTGGCTACGATTTCAAGGAGGCACTACGTCGCAAGCGACTAAATGTGCTGCCACTCAGTGACACGATGAGCAACTGGTCCGAGGAGGAGTGCCAGAAATTTGAGGAAGGTATACAAACGTTCGGCAAGGACTTTTATCAGATACGCCAGAATCAGGTGCGCACAAGAACCATGCGCGAACTGGTCCAGTTCTACTATCTGTGGAAGAAAAGCGAACGGCGGGATCAGAGCTTTGCCCTTAACGATACAATTGATCATATGGATGTATTCATTAACGAAGCCGGCAATTGTAATGGAAACGGGAATAACATTGAAAACGCAAATTTGAATGGAAATGGTAATGGTTATGGAAGCTGCTCACCTCATGCAAGCTGTTGTAGTAGTAACAATGGATATGCACCCATGGATCATAGTTTGGACAAAGATGCGTTAAGAAAGCCCACGACGAAAAACTACTCCATTATGACGGGTGGACTATCGGGAGCGGGAGCTGTAGGAGAAGCTGGTGGAAGTCGCAAGCGTGAAGGTTTCTTTACTGCCAttgagcaggagcaggaggacAACGATAGCCACGAACATTTTATAGATAGCTTaagttag
- Protein Sequence
- MAGRDVTITPSERRKSPGMSLCSESSGTEPPPMSPTSSVTDTTFEPTIDMMVNDFDDEATLNEEEALADMEAHNADDEITTLREESEMPIEQLLAKYRSMTNVNLSTVALPSSSSRRRRAAKRQLHNADVANTASASSTEEPQNVEVLSPAMNYTSIQFNQDVGDKDEDLTHELLPEVTKTQHRSHLLDLYPDESFGGSAPHTISSAENFGSFTPLQTLFEEVEEARLEEEDSDTDSDGARKNIMVGSDFQAEIPEGLSQYGDILPYENEDQLIWEPSQVREREVEHYLALIQETQPLSTTADDGSEAAAVGCPQSTDAIEDIVAAPIPTAAAATGASSSKMESVIKDNEQALHLLVQCGYDFKEALRRKRLNVLPLSDTMSNWSEEECQKFEEGIQTFGKDFYQIRQNQVRTRTMRELVQFYYLWKKSERRDQSFALNDTIDHMDVFINEAGNCNGNGNNIENANLNGNGNGYGSCSPHASCCSSNNGYAPMDHSLDKDALRKPTTKNYSIMTGGLSGAGAVGEAGGSRKREGFFTAIEQEQEDNDSHEHFIDSLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01321132;
- 90% Identity
- -
- 80% Identity
- -