Sred011643.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- -
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010001060.1:369588-371851[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.6e-11 8.3e-08 32.2 0.1 1 41 228 269 228 274 0.91 2 4 0.11 1.1e+02 3.0 0.0 8 35 290 321 284 330 0.67 3 4 1.4e-06 0.0013 18.7 0.0 2 46 339 384 338 384 0.94 4 4 1.6e-10 1.6e-07 31.3 0.0 2 43 391 433 390 436 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATTTGTTGAACAAAGGGCAAGAGTACCAAAAACAAGTGCAGAAAATAACAACGCTACTAACTGCCACAGCTCACGGCGATGTGGACGCCCTTAAACTTAATCAGGCGCTTCAGCTATACCTTGAACAGTTCCGTCAACATACGATGGAGCTGTTGCAGAAAGTGCGAACTCGTTATAAACGTAACGAGGAGATACTTATATGCCGACAAAAGGCGCGTTCTGGCAGTAATGAAGTCGTTGGAATGAGCGGCGCTGTGCTCCGCGGCGGAACGTTTCGTTTTAAAggcaatttatattttcgtGATGCAGACGGACGCAGTTGTCCCAACAATGAGGACTACGAGAGACGCAGCAACTACGAAATGTTTCCAACTGATTTCGATATGCGATCCAAACACGTCTGGACGGTTTTGGACAAGAAAAACATTGTTATGGGTGTTAAGCAGCAGCTTTTGGATCATGCCGCCTTCAGACCACAATGCAGCTCTAGAAAAAGTGGACGCAAACGCAAGGCCATAGATCTGCACCTGCATTCGgttgaaaaattgttaagtGTCGCGGATAGCTACTTTACCATTGATTGGAATCAAATAAGCACACTGGACCTAGAATATCGTCATTCAGCCTACAGTTGTGAGGCCATGTGGCTGGTGTATTTGCAGCCGCAGATCAAGCGCGATGAATGGACAGCCGAAGAGGATCACATTCTGCTGGTAGCTgcccaaaaaaacaagatgCAAAATTGGGTAGCCATTGCGTCTGAAGTAGAAAGGCGCTCGGATTATCAGTGCTTTGTGCGCATGCAGACAACGCTGCGCAACAGTCTAAATCCAATGCATGACGTGAAATGGTGCTACCAGGACAGCGAGCGTTTGCGTGCACTTGTCTTGAATAATACGGTAAACGGCGTTGTAAATTGGTCTGAAGTGACCGAACATTTTCCACACAGAGCGCGATCCACACTAATTGGACGCTATGTATATTCTCTGAATCCCGAAATAAGTCACGaACCATTCACTATAGAAGAGGATGTAATGCTGTATGCTGCCGCTAAGGAATATGATGGCAAGTTCAGTTGCTTTCCACTCACGCTATTTCCCAATCGCTCAAGGGCCCAGCTTCGTAATCGATATCATAATGTGCTGGCACAGCGTAACAAAACTGAATCTTGGTCTGTGAAGGATGATGAAAACCTAATGATGTTCGTCTCCAAACATGGCACCTCGCAGTGGGTGAACTGTGCCAAATATTTGGGCAATCACACGCGCACCAGCTGTCGCACACGCTTTTTGGTCATCAAGCGGTTTCTGGAGAAGCATCCAAATTCAACGGAAGCTGATATACCACGGCGCAAGTCCCGTAAAAACGATTTAATTAACTCTGAAAATTGGGAGCTATGTTTACAAAAAATGCAATCAGGTCCAGATGCAGAGTTTACGATGCCAATGTCAAATGAATCGTTGTTGGACTCGCCACCacacaatagcaacagcaagaatCCTTTAATTAAAGAtggaaattatgaaaattggGACGTACGTTCACTGGACTCAAAAGCGGAATCAGTGCTGTCGTCAGTACAACGAAAAATGAGCAGATTTGACCATATTGTGTATAATCATTTCATGTACGCCTATAATCTCAACCTACGGTCGCCTGCGATGACAATACCACTTCCAGAAAACAAGAGTAATCTACAAGCAATGTCTTATGCACTATGTTTTCAGCCAACTGGTCATAATCGTATACTCATAAAAAGCGATTGCCTTCCCAAGCAGCTGATTCTCTGTCACAACAATGCACCCTGTCAATTGCAGCCGTGTGAGAAAAATAAGTCAGCGACGAAATTGCTACCGCCAAACTGGTCCACAATGATGGGATTTCGGGCCATGTGCATATTGTCAATGCGGACACCCGTTACCTTACCATCGGAGCCCGAAAATAGTTACGATGAACCTCAGCCAGAATTGCAGCTGTTTCGACAACGTTTACGCACACTATTCTATCGCACAACCCTGTTGAGCCGTCTGGAGGTGGCGCCGTTCGAGGAACTGCCGAATGTATTGATGAAACTGCCAGGTTATATTGAAAATGACGACTTGGTAAACACTTCAGAGCCGGATGACGATGATTAA
- Protein Sequence
- MCDLLNKGQEYQKQVQKITTLLTATAHGDVDALKLNQALQLYLEQFRQHTMELLQKVRTRYKRNEEILICRQKARSGSNEVVGMSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYERRSNYEMFPTDFDMRSKHVWTVLDKKNIVMGVKQQLLDHAAFRPQCSSRKSGRKRKAIDLHLHSVEKLLSVADSYFTIDWNQISTLDLEYRHSAYSCEAMWLVYLQPQIKRDEWTAEEDHILLVAAQKNKMQNWVAIASEVERRSDYQCFVRMQTTLRNSLNPMHDVKWCYQDSERLRALVLNNTVNGVVNWSEVTEHFPHRARSTLIGRYVYSLNPEISHEPFTIEEDVMLYAAAKEYDGKFSCFPLTLFPNRSRAQLRNRYHNVLAQRNKTESWSVKDDENLMMFVSKHGTSQWVNCAKYLGNHTRTSCRTRFLVIKRFLEKHPNSTEADIPRRKSRKNDLINSENWELCLQKMQSGPDAEFTMPMSNESLLDSPPHNSNSKNPLIKDGNYENWDVRSLDSKAESVLSSVQRKMSRFDHIVYNHFMYAYNLNLRSPAMTIPLPENKSNLQAMSYALCFQPTGHNRILIKSDCLPKQLILCHNNAPCQLQPCEKNKSATKLLPPNWSTMMGFRAMCILSMRTPVTLPSEPENSYDEPQPELQLFRQRLRTLFYRTTLLSRLEVAPFEELPNVLMKLPGYIENDDLVNTSEPDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -