Sred008112.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- ct
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000802.1:1-18633[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.7e-27 4.9e-23 80.9 0.0 3 72 719 789 717 794 0.95 2 3 5.6e-32 4.9e-28 96.9 0.0 3 77 1210 1285 1208 1287 0.96 3 3 3.4e-31 3e-27 94.4 0.0 3 76 1492 1566 1490 1569 0.96
Sequence Information
- Coding Sequence
- ATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCTCTGGAACAAACTCATCTCGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTAAAGCGACAGCATATTATGCGTTTGGAGGCGCGTTTGGACAAGCAACAGATCAATGAGGCACTTGCTGAGGCAACTGCATTGGCTGCCGCTGTAAATGCAGCTGCAACGAACatcaatatcaacaacaacaacaacaataataacaatagcagcagcaacaacaataacaacagcagcaacaacaacaatcacagcagccaaagcagcgacaacaacaatgagttGAGCGCAGtgtttaaaacaacaacagatctAACTACATCGACCCATCAGCACaatgacgatgatgaggatgacgaTGATAATGATCATGATCATGAGACCGAGCTGCGCGATGCTGATGTCGATGAGGACGAGGATACGGATATGGGAAACGagcaacagcaggagcaacagcagcaacagcatgcAGCCATTACCAACAATCGACATGATGATGAAAACGATGATAagaatgttgatgatgatgatgaggaggagCAGGATGCCGATATGTCCAATGCCAGAGGCACAGCGGACAGCAATGagctaaaaatcaaaaaggaaCAGCACAGTCCATTAGATCTGAATGTGCTCAGTCCACATTCGGCTATTGccacagcagcggcagccgcagcagccgcTGCCTGCGTCAACGATCCCAATAAATTCCAAGCTTTGCTGCTGGAACGCACCAAAGCCGCACTTGCCGCCGAGGCGCTCAAGAATGGCGCCAGCGATCCAACACTTGCCAGCAGTGATGAAAtgccgcaacaacaagcagcagcagtcgctcCGACACCAACTAATCAAGTTAAAGATGATCaagcacaagaagaagaagaagaagaagaagcaggagCAACAGTTACAGCTACAGCCAATCCAGAAACAAGCACAAACGTTGGGGAAACGAGTGAAATTGAAACATTGAGAGCCGAGGCCAATTTGCAGCCCAAAGTTGAAATCATTGACACAGAAGACGATGGTGAAATTGCCGCTGGCCAAACACTGGAAGAGCAGCTGGTTAATAGCTATTGGCGTCGTGGCTTTGAAACAGCCACACCAGCAACAGATACaataccagcagcagcaacaacaccagcaatcgctgcagcagcaactggaaGCAAAACGCCAACAATATATCAAAATGCCAATgcggtgcagcagcagcagcagcaattgttgccgccaccaccgccgccaccgctgccgccgacacaacaacaacaacaacaacagcagcagcacttttctgcccagcaacaacaacaacaatatcatcaacaacaacaacaacagcaacatggaCCTTCGTCCACAGTGCTGCTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGACTAGATGCCGCAgcccagcaccaccaccaacaccaccagcaacagcaacagcaacagcagcagcagcagcatcagcaacagttgcatcagccacagcaacatcaccttaacagcagcaatagcagcaacagcaacagcagtgtTACCGGCAACGATCCACTGAATCCACATATGCATCATGCGCATCATCATGGCCATCCACATGGCCAGCTGTTGCATGCAGCGCATCATCTGCATCATGGCGCCGACTCCAACTCATCGAGCGCCACAAGTACACCAAACAGCACCGCCCAGCTAGCAGCAAGCATTGCCAGCACACTCAATGGCAACAAGTCACTGTTACAGCATGCAGCAGCCGTTGCCAATGTtgaggacaacaacaacagcttgacACCGAATGCAAATGCggctgttgccgctgcagcGATAGCTGCCAATGCACAGCATTTTCTACCCAATCTGAACAATTTTCCCAGCCTGCCAGCGTTTCAATTTGCAGCCGCAGCTGCCGCTGGCCAGGAAGCCCGAGCACATTTTCGCTTTGCGGACTCTGAGTTGCAACTGCAGCCGGGCGTCTCGATGGCCGGCCGTTTGGGTGAATCGCTGATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCGAATCAGGCGCTGGACACTCTGCATATCTCGCGACGCGTTCGAGAGTTGCTCTCCGTGCACAATATTGGACAGCGACTGTTTGCCAAATACATTTTGGGTCTGTCGCAGGGCACCGTCTCGGAGCTGTTGAGCAAGCCAAAGCCCTGGGATAAGTTGACCGAGAAGGGTCGTGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTCCTCAAATCCCTCATACCCAAGAAAGATTCGGGACTGCCACAGTATGCTGGACGCGGCGTTGGTGGCGATGACTCCATGTCCGACGATCGCCTCGCACACATTCTCAGCGAGGCCTCCTCCCTAATGAAGAGCAGCGCAGTCGCcgtacaacagcagcagcagcagcaggagcatcaACGTCGTCATGCCGGCGACGATACGCACAGCAATGAGGATAGCAAGTCGCCGCCGCAAAGCTGCAGCTCCCCCTTCTACAAGGTGGACCAGCAGATCAAGCAtctgcagccgcagcagcagcaacagctgcaacatgtCTCGGAGCATGCGCAGCGCGAGCAGCGtgaagcagcagccgcagccgccgccgttgccgtgcaccaacagcagcagcaacgggaGCAGCGAGAGCAGCGCGAACAGCGGGAAGCGGCGCAGCgtgaacagcagcaacgtaTTCGTCACGAGGATCTGGCACAGGACAAGATGGCGCGTCTCTACCAGGAGCTAATGACACGTACACCCCGTGAGGCAGCCTTTCCAGGCTTTTTGTTGTCGCCGTTCTTTGGTGGTGCGGCTGGTATGCCTGGAACACCCGCCAATCCATTCCCCACTGCAATGGCCGCCGATGAGAATATGCGCCATGCCTTGGAGCGTGAGATAGccaagctgcagcagcagcaggcccAGCAGGCGCAGCAAGCCGCCGGTTTTCCAAACTTTTCCAGTTTGATGGCCCTGCAACAGCAGGTGCTGAACGGTGCACAGGATCTATCGTTGGCCAGCAAGGAGATCAAGCTGAATGGCCAACGCTCGTCACTGGATCAGcacagcggcggcagcagcagctgctccaAGGACGGCGAACGTGGCGATGACAACGATCGCAGCTATCCAGCCCTGTCACATGTCCGCAAGTCGGAGGGCGGCAACACACCAGCAccgccagcaccaccagcTGTAGCCGGTGCTGCCGGTGGTAATAGCAATTCAAGTGCTGCTGGCACCACCGTTACCACTGGTGGCCATGGCAGCAACTCAGCGGCACCCAGTCCACTGAGCAACTCCATACTGCCTCCGGCATTGAGCAATCAGGGTGAGGAGTTTGCTGCGACGGCCAGTCCGCTGCAGCGTATGGCATCGATAACCAATTCGTTGATCACACAGCCGCCAGTGACGCCGCATCACTCGCAGCCACAGCGGCCCACCAAGGCGGTGTTGCCACCGATCACACAGCAGCAGTTCGATATGTTCAACAATCTTAACACCGAGGACATTGTGCGACGGGTGAAGGAGGCCCTCTCCCAGTACAGCATCTCGCAGCGTTTGTTTGGTGAGTCAGTTCTGGGTTTGTCGCAGGGTTCGGTGTCCGACCTGTTGGCGCGACCCAAGCCCTGGCACATGCTCACGCAGAAGGGACGTGAACCGTTCATACGCATGAAGATGTTCCTGGAAGATGAGAATGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAGATTGCGCCCGAGAAGCTTATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCACAGGGCTTGGCCAATAAAATGCAGGCCAACCTGCCCATGCAAAAGATGATGAATGAACTGAAGCTGCAGGAGCCTGCACAGGCCCAGCACATTATGCAACAGATGCAGGCAGCGGCTGCCATGTCTGCAgccatgcaacagcaacagcaggcagcTGCCGCTCAAGCAGCCGCCGTGCAGCAGGCCCAGGCGCAGGCGCAGGCTCAGGCTCAGGTCAGTCAGCATCAGCAGGcgcatcaacatcagcaggcccagcagcatcagcaggcACAGCAGCAGGCGCAAGCCCAACTGTTGCATCACCAGAACATGCTGTTGACATCGCCAGGCTTGCCACCCCAACATGTCATTAGTCTACCGGCAGCAGTGACGCCCAGTGGTCTTCAAAGTGGTGCTGGCAATCCTGCTGCAGTTGGCGGCACGCCCGGCAGCAATGAGAAGAAGCCCATGATGATGCCCGTGCTGGGTGGAGCTCATGCGCCCAATGCCATGCGCAGTCTGCATCAGCATATGTCGCCCACGGTTTATGAGATGGCTGCATTGACCCAAGATCTGGATACGCACGATATAACAACGAAAATCAAGGAGGCTCTGCTTGCCAACAACATTGGTCAGAAGATCTTTGGCGAGGCAGTGTTGGGTTTGTCGCAGGGCTCCGTCTCGGAGCTGCTTAGCAAGCCGAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAGCCCTTCATTCGCATGCAACTGTGGCTCAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGTAAGCGGCGTCGTAGCACTGGACCCAATCAGCAGGACAACAGCAGTGATACGTCCAGCAATGATACAAATGATTTCTATACGAGCAGTCCCGGACCGGGTTCGGTGGGTTCTTCGGTGGGTGGAGCACCGCCCAGCAAGAAGCAACGTGTGCTCTTCTCCGAGGAGCAGAAGGAGGCACTCCGTTTGGCCTTTGCACTCGATCCATATCCCAATGTTGGCACCATTGAGTTTCTGGCCAATGAACTGAGTTTAGCGACCCGAACCATCACGAACTGGTTCCACAACCATCGCATGCGACTCAAGCAGCAGGTGCCACACGGCCAACCCGGCCAGGACAATCCCATACCCAGTCGCGAGAACACAAATGCCACACCCTTTGACCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGTTTGAGTGGTGCGCCCATACCCTACCCACCGTATTTCGCAGCGGCTGCTCTACTCGGACGCAGCCTGGCCGGCATACCGGGtgcggcggcggctgctggGGCAGCGGCTGCGGCGGCTGCAGCAGTGGGCGCTGCCGGCGGCGATGAGCTCCAAGCACTGAATCAGGCATTTAAGGAGCAGATGAGCGGCTTGGACTTGTCGATGACAACGCTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAGCTCGAACTGGACGCCAGCGGACACAATATGAGCGACAACGAGTCCCTCGAGGGTGGCTCCCACGAACCGGAGCACACACCCATTTCCGATTACGAGAAGGCGCTGCAGAAATCGGCACTTGCCTCGGCGGCCGCAGCTGCTGCGTATATGAGCAATGCGGCGCGCAGTTCACGTCGCAAGCCGGCGGCGCCACAGTGGGTCAATCCGGCTGGTGCCACCACCCCAACGGCAGCTGGCGTTGTTGCCAATACCGCCGGTGTTGACAGCACCAccggcagcggcggcagcgagCGCATTATCAATGGCGTCTGTGTCATGCAAGGCTCCGACTACAGTCGTGAGGAGGGCGACGAGGGTGTCAAGGGTGACAATGCCTCCTCCAATGCGGCTGATGCGGAGCATGAGGATCATGCACATTTGGAGATTGAGCAGCGTTTAATGGAGCCCGAGGTGCGCATTAAGCAGGAGGAGGATGACGAGGAGGAACAaacgcagctgcagcagcagcaccagcaccagctgTTGGACGATGGCGCGCCCCTCGACAGCGAAGCGGAAAAGCAGCTCAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGTGTGCGGCGCCTCAGTAGCAATGGCGATGCCGAGGAGGCGagggcggcagcagcagctgtagcaGCTGTTGCGGCAGCGacgcaggcagcagcagcagcgtggaACTACTAA
- Protein Sequence
- IKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNININNNNNNNNNSSSNNNNNSSNNNNHSSQSSDNNNELSAVFKTTTDLTTSTHQHNDDDEDDDDNDHDHETELRDADVDEDEDTDMGNEQQQEQQQQQHAAITNNRHDDENDDKNVDDDDEEEQDADMSNARGTADSNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAACVNDPNKFQALLLERTKAALAAEALKNGASDPTLASSDEMPQQQAAAVAPTPTNQVKDDQAQEEEEEEEAGATVTATANPETSTNVGETSEIETLRAEANLQPKVEIIDTEDDGEIAAGQTLEEQLVNSYWRRGFETATPATDTIPAAATTPAIAAAATGSKTPTIYQNANAVQQQQQQLLPPPPPPPLPPTQQQQQQQQQHFSAQQQQQQYHQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAAAQHHHQHHQQQQQQQQQQQHQQQLHQPQQHHLNSSNSSNSNSSVTGNDPLNPHMHHAHHHGHPHGQLLHAAHHLHHGADSNSSSATSTPNSTAQLAASIASTLNGNKSLLQHAAAVANVEDNNNSLTPNANAAVAAAAIAANAQHFLPNLNNFPSLPAFQFAAAAAAGQEARAHFRFADSELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGVGGDDSMSDDRLAHILSEASSLMKSSAVAVQQQQQQQEHQRRHAGDDTHSNEDSKSPPQSCSSPFYKVDQQIKHLQPQQQQQLQHVSEHAQREQREAAAAAAAVAVHQQQQQREQREQREQREAAQREQQQRIRHEDLAQDKMARLYQELMTRTPREAAFPGFLLSPFFGGAAGMPGTPANPFPTAMAADENMRHALEREIAKLQQQQAQQAQQAAGFPNFSSLMALQQQVLNGAQDLSLASKEIKLNGQRSSLDQHSGGSSSCSKDGERGDDNDRSYPALSHVRKSEGGNTPAPPAPPAVAGAAGGNSNSSAAGTTVTTGGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQANLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQAQVSQHQQAHQHQQAQQHQQAQQQAQAQLLHHQNMLLTSPGLPPQHVISLPAAVTPSGLQSGAGNPAAVGGTPGSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMTTLKRERSDDYQDELELDASGHNMSDNESLEGGSHEPEHTPISDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGATTPTAAGVVANTAGVDSTTGSGGSERIINGVCVMQGSDYSREEGDEGVKGDNASSNAADAEHEDHAHLEIEQRLMEPEVRIKQEEDDEEEQTQLQQQHQHQLLDDGAPLDSEAEKQLKVINEEKLRLVRVRRLSSNGDAEEARAAAAAVAAVAAATQAAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_01327061;
- 80% Identity
- iTF_01327061;