Sred013107.2
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- kn
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010001204.1:106873-126183[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-88 3.7e-85 286.3 0.2 42 182 107 247 92 247 0.97
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGACGAAGAAGTGCGCGTATTGTCGAAATCGAAAGTgcgaatacaacaacaacaacaagaacaacaacaaatgtgtgtAGTAGTACGAATGCCAAAATGACAGCGGGCTTTCATCATTCGGTGCATTTAGCGACGGCAAATCAACAcgaacatcaacatcaacaacaacaacagaacactAATAGGCACAATcctaatcatcatcatcaagaaCAGTCGCATTTGCAGCAGTTGGAGAATCGAAATCTTAATCAGGATCATACATTGAGCAGCAATAACTCGAACAATAAGATAATGCGCTGTGATGTGAGttTGGGCATTGGCCGCGCCCACTTTGAGAAACAGCCGCCCAGCAATTTGCGCAAGTCGaatttctttcatttcgtGATTGCGCTCTACGATCGCGCCGGCCAGCCCATCGAGATCGAGCGAACAGCCTTCATCGGTTTCATCGAGAAGGACTCCGAATCGGATGcgacaaaaaccaacaatggCATTCAATATCGATTGCAATTGCTCTATGCGAATGgCGCCCGACAGGAGCAGGATATATTCGTCAGACTCATCGATTCGGTGACAAAAGCGGCCATCATCTACGAGGGCCAGGACAAGAATCCCGAGATGTGCCGTGTCCTTTTAACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MFAPRRRSARIVEIESANTTTTTRTTTNVCSSTNAKMTAGFHHSVHLATANQHEHQHQQQQQNTNRHNPNHHHQEQSHLQQLENRNLNQDHTLSSNNSNNKIMRCDVSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -