Sred011351.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- Ubp1
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010001047.1:353670-366164[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-53 2.9e-49 167.3 0.5 18 190 383 552 366 563 0.88 2 2 1.1e-12 6.2e-09 35.4 0.7 188 222 610 644 604 645 0.91
Sequence Information
- Coding Sequence
- ATGGCGCTTTCGATACTATCACAAAATTCCCGCCTGTTGgattttcaaaacatatttgatCCACAATAttcactacaacaacaacaacatcaaccacACCAGCAACCACAATCACAATCGGAACAACCGCAAACATCACGCATATCAACGAAATTCGATTTAAGCATTTTCAGCGATTTTGACCAAATGgaattcaacaacaatttaaatcgAAACCATCATCAGTAtcagaataataataataatagtatcaacaataataacaacatcaacagtaacaacaacatttatacGCACCAGACCAACGGTGAAAATCTTAATCAGGTCCAAAATCGTCATTTCAACAGCGgctatcatcatcagcatattGGATCGGATTTTGAGCAAGTCATTAACTTTGTGGACTCACCACCGAACTCTGAGGAATCTTGGACAGACGCACAGTCGAAAGATTCGCCAAGACCGCAAATTATCGACGTTCGAACAATTTATTCAGACAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGAAATCGGTCAAAGTGAAACTTCGCCAACACAGCAATCGGGCGACATACCCAATAAGGTTGGACTTCAAGAGAAAGATAAACACAAACGTGAAAAGCCTTCAGGACGCAACAGCTGGAGCGACGATATTGGATTTGATTTGAACGCTGAGTTTAATAGCAACTCATATTTGAACAAtgAAAACTTTATATCGTTCTCACCGAGCCTGGCGACACTAAAACAGGAGCCGCAAACGGATCAGCTCAAACCAAATTCAAAGCTATCCTTAGACAGTAGCTCTGCCGTTGGCAAGATCGACAAATCAACTTTGGGTGACGCTAATCATTCACCACAGCGCTCGGGGCAGACATACGAAGCGGATGGAACAGGATCAGGAGCAGCTGGTGGCAGTGGCAAGCATGAGTTGAACCCTGGTCTTATTTGCGGGTGTTGTTCGCCGCAAGGCTCACCATCCGCGTCGGAATTCGAACTAAACGGCATTGCCGATGGAAATGCAGCTTCAGCTGACAAACCCAAAACTGCATCGGGCAACGAGGCCTATGCACAGTCGTCTCGCTCTggactgcagcagcagctcagtGCCGTCGAGACGGCCAAAATTGAACCGAGTTCTTCCACTAGTGCCTCGCATGGAGATGATCACAAATTTCAGTACATTTTGGCTGCGGCCACTTCAATTGCAACAAAGAACAATGAGGAGACTTTGACCTACCTAAATCAGGGTCAAAGCTATGAGATCAAATTGAAGAAAATTGGTGATTTATCTTTCTATCGTGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGTCGATTGCAGTTCATGGAACGCGAACAGATGAAACAATGGCAAGCATCGCGTCCTGGTGATCGCATCATTGAGGTAGATGTACCATTATCATATGGCTTGTGCCATGTCTCGCAGCCTTTGAGCTCGAATGCATTGAACACTGTCGAAATCTTTTGGGATCCATTGAAGGAGGTCGGTGTTTATGTCAAGGtcaattgcatttcaacaGAGTTTACACCAAAGAAGCACGGTGGTGAAAAGGGTGTACCATTTCGACTACAAATTGAAACCTATatagaaaattcaaattcagcaaatagcagcaacagcagttcaagcagcagcagcagcaccagcagcaacggTGCCAATGGCAATAttaacggcaacaacaacacaacagcaggCATATCGTCAGGCGTCTCAGAGAATCGTGCATCCATTGGAAATGCCAGCAGCGGCTCCATAGCCGGCCTGGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAGGTTTTTAAGCTAAAAGGCGCCGATCGCAAGCATAAACAGGATCGCGAAAAGATACTAAAGCGTCCACATTCGGAGCAGGAGAAGTTTCAGCCCAGCTACGAGTGCACCATTATGAATGATATATCATTGGATCTGATAGGGCTAGCATCAAAACCTGGCTGCTACAGTCCCGAATATATGAAATTGTGGCCAAATTCGCCGGTGCATATACCAAAATATGATGGCATGGTACCATTTGCCAGCAGTGCATCACCGACGGCAAGCATCAGCAGCCCCATTGCGATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTGTCGCCACAGCATGTGCCAGCTGATATGGATGATTACAATCAGAACATAATGCCAGACTCAACGCCAGCACAAGTGACACAGTGGCTGACCAATCATCGTCTGACGGCCTATCTTACCACATTTGCCCATTTCTCGGGAGCGGACATTATGCGTATGACCAAGGAGGATCTAATACAGATCTGCGGACTTGCCGATGGCATACGTATGTTCAATATTTTGCGCGCCAAAACTATTGCCCCACGTTTGACGCTGTATGCCAGCATGGATGGTTGCAGCTACAATGCCATTTACTTACTGTCCAACACGGCCAAGGAGTTGCAGCATAAGCTATACAAGTTGCCAGGCATCTACGAGTTCATGGCTAAGGGCTGTGCTTCTGGCTCGGTGGAGAATGGCGGTGTTCCACCTGCAGCTACTGCCGCGACTCTCTACAACAATTGGGGCATGCATTCGAAGTTTGcgggcagcggcagcggcttaaacattttcaacgaTGTTAACAAATGTGGTGTCTTTATTTCGGGTCCGTCGGGCATTCTTGTTAGCGTCACCGACGAGGTGCTTAACAATGAGATAAAGGACGGCAGTCTCTATGCTTTGGATGTGCAAGGCGGCAAAGCTGTTTTGAAATTGATCAATAAACAGGACAGCAATTAA
- Protein Sequence
- MALSILSQNSRLLDFQNIFDPQYSLQQQQHQPHQQPQSQSEQPQTSRISTKFDLSIFSDFDQMEFNNNLNRNHHQYQNNNNNSINNNNNINSNNNIYTHQTNGENLNQVQNRHFNSGYHHQHIGSDFEQVINFVDSPPNSEESWTDAQSKDSPRPQIIDVRTIYSDSGSRKRRMDWDSLEIGQSETSPTQQSGDIPNKVGLQEKDKHKREKPSGRNSWSDDIGFDLNAEFNSNSYLNNENFISFSPSLATLKQEPQTDQLKPNSKLSLDSSSAVGKIDKSTLGDANHSPQRSGQTYEADGTGSGAAGGSGKHELNPGLICGCCSPQGSPSASEFELNGIADGNAASADKPKTASGNEAYAQSSRSGLQQQLSAVETAKIEPSSSTSASHGDDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMKQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSNALNTVEIFWDPLKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSNSANSSNSSSSSSSSTSSNGANGNINGNNNTTAGISSGVSENRASIGNASSGSIAGLAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKILKRPHSEQEKFQPSYECTIMNDISLDLIGLASKPGCYSPEYMKLWPNSPVHIPKYDGMVPFASSASPTASISSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPDSTPAQVTQWLTNHRLTAYLTTFAHFSGADIMRMTKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGCSYNAIYLLSNTAKELQHKLYKLPGIYEFMAKGCASGSVENGGVPPAATAATLYNNWGMHSKFAGSGSGLNIFNDVNKCGVFISGPSGILVSVTDEVLNNEIKDGSLYALDVQGGKAVLKLINKQDSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00803364;
- 90% Identity
- -
- 80% Identity
- -