Sred008492.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- slbo
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000807.1:1533840-1535264[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 1.8e+03 -1.1 3.5 30 57 342 369 338 376 0.74 2 2 4.9e-13 4.7e-10 39.3 12.1 3 64 389 450 388 451 0.96
Sequence Information
- Coding Sequence
- ATGCTGAACATGGAATCGCCTCAGATGTATGCGGATGCGGTGCAAACGCTTGCGCAGCTCGACttgaagaagcagcagcagcaacagcagccgccaaCATCCTTGCCACAGCAGGCAACAATTGGCCAAATAACGCTGACGGCGATGACCagtgcacaacagcaacaacagcagcagcagcagcagcagcaacaacagcaacaacaggtgACAACCGatgcaaataacaataatgccACAGTGCAGGATGCAGCATTGCTGGTCAAGCAGCATGCAGcaatgcaacaaatgcaactgaacaacaacaacaacaacagcaacagtaataacaacaacaacacgaacagcttgttgcaaaaacaaatgctgCAACAGTATAGCACACAAACGGACCTCGACGAACTCACCACACAGGAGATAACACTCGACTTGCAACATTTGATCGACGATCAGTTTCGGGATACAGAAACTTTGGGCATTTTCAGTGATATGGTGACGAGTCCGGGCGGACTGTCTGCCACATTGCCACCCAGTGGCATGGTCAGTGCAGCGGCCAAAGtcttgcagcaacagcaacagactCTAGCAAATGCacgtcagcaacaacaacagcagcaacagcagcagcaacaacaacagcagcaacaacaacagaatcCATATGGCAGAGCAGCATTGGCGTACATGCCACAAGCGGTACACTCGAACGCCAACTACAACAATCATTCGAGCGATGAGAACAGCTCGGTGGGAAGCGATTCGAGCAGCACGATCAAGGAGGAGCCCATCGATCCCGATTATCGCAGGCACTTGCAGGAGTCGGTCAGTAGCcaggcggtggcggcggcagcgtTCATCAATAACACCAGCAATGGCCTATACAATGCATATCAgagcaacaatagcagcagtaataacagcagcagcaataatagcaacaacacttCAACAAACTCAACACACTCAACGCAATTCACCAATTTGACCACAGCCAATGTGCTGGCTCATCACAGTTTGCCGCATCTAACGGCGAACGCACAACAGCTGCTCAAACATCACAGCAAGCTTCAGcaatcgcagcagcagcagcaacagcacgcacaccaacaacagcagcatcaccaTCATCGCAAGCATAGTAACAAGCATGTGGACAAGGGCACCGAGGAGTATCGCCGGCGTCGAGAGCGTAACAATATTGCTGTGCGCAAGAGTCGCGAGAAGGCAAAGGTGCGCTCCAAGGAGGTGGAGGAGCGCGTTAAGTCGCTGCTTAAGGAGAAGGATACGCTGTTGCGTCAGCTAAGCGAAATGACCAATGAGCTTTCGCTCCATAAGCAAATTTATATGCAGCTCATGAATCATACAAATCCCGAAGTGAGTCGCGTCTGTCGCAGCTTTCTCAATACAAACGAACATGCGCTGTGA
- Protein Sequence
- MLNMESPQMYADAVQTLAQLDLKKQQQQQQPPTSLPQQATIGQITLTAMTSAQQQQQQQQQQQQQQQQQVTTDANNNNATVQDAALLVKQHAAMQQMQLNNNNNNSNSNNNNNTNSLLQKQMLQQYSTQTDLDELTTQEITLDLQHLIDDQFRDTETLGIFSDMVTSPGGLSATLPPSGMVSAAAKVLQQQQQTLANARQQQQQQQQQQQQQQQQQQQNPYGRAALAYMPQAVHSNANYNNHSSDENSSVGSDSSSTIKEEPIDPDYRRHLQESVSSQAVAAAAFINNTSNGLYNAYQSNNSSSNNSSSNNSNNTSTNSTHSTQFTNLTTANVLAHHSLPHLTANAQQLLKHHSKLQQSQQQQQQHAHQQQQHHHHRKHSNKHVDKGTEEYRRRRERNNIAVRKSREKAKVRSKEVEERVKSLLKEKDTLLRQLSEMTNELSLHKQIYMQLMNHTNPEVSRVCRSFLNTNEHAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00494862;
- 90% Identity
- iTF_01320226;
- 80% Identity
- -