Sred013731.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- Atf3
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010001277.1:301940-311170[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-14 1.7e-11 43.9 15.2 2 65 165 228 164 228 0.96 2 2 0.83 8e+02 0.1 0.8 39 51 335 347 325 350 0.68
Sequence Information
- Coding Sequence
- ATGTTTAACTCCAACATGCCGGCCACATCTCTGCTGAGCATCGAGGGCAGCAACTTTGGGGCACACACGCCCAAAACTCCAGAGATTCTCAACTCACTGATCGCCATGTCCAATCCGTTGGAGAACTACACTTTCAATGCCTCAAACTCGTGCAGTGCCGCCTCCACACCGATCGTAATACGCAATTTCTGTGGCAATACCAACGGCCAGTTACACTCGCAGGACAGCAGTCATTCCAGTTGCTCGGCCTCGCCACTCGATTCGCCAGCGGGCACAGCCACCACGCCCAGTGTGCAACAGACCTGTTCGCAGCTGATCAAAGCGGGCCTCAAGCTCTCCATACAAAGCAAACGCAAGCTGTCCACCTGCGACTCGAGCTCCGGCTCCGAGCAGCCCACCTCGAAGTGTTCGAGACGCGACGAAGACTGCGAGGAGTCGAGCGATGAGGATAGCGAAACGAAGTCCGTGCCCAAGGGGCTCACGCCCGAGGATGAGGATCGTCGGCGGCGACGTCGCGAACGCAACAAAATTGCTGCCACCAAGTGCCGCATGAAGAAGCGCGAACGCACCCAGAACCTAATCAAGGAGTCCGAGATGCTCGACACCCAAAACGTTGAGCTCAAGAACCAGGTGCGCTCTTTGGAAACGGATCGTCGGCGTCTCCTCGAAATGGTGCAAACACATTTGCCCAACTGCGTCAAACGTGGCGGTTGCCAGTTGCCCTCAAAGCTGCTGCAATCGCCGGCTCTCAAGTATTTCGCCGAGTTGGAGCTGAATGGGTTGCTTAACGGTGACAACAATGCGAGCAGCGCTGTCAATACGcccacacagcagcaacaacagcagcagcaacagcaacaacagcagcaacaacaacagcaacagcagcagcagcagcagcaacaacaacaacgcatgCAGAGTATACCATCCATGTCGACGTTCAAGTTTGGCAGCAAGTCGCCAGtggcaatggcagcagcagttgcagctgcacaggcccaacagcagcagcagttgcagcagcagcagcaacagttgcccaATGGTTACTGCAAACCTTCGCCCTCACCGCAGGAGTTTGAACATGCCGGCTATTTAAGTTCGCCAACACAGGAGGTGCTCTGtctgccacagcagcaacaacaacaacagcagcagcagcagcaatcgtcTTTGAATcccgccagcaacagcaacaatgccgACAGCAATAACGCCACATTGCTGCTAAGTCAACAAGTCTCGGACTATGTGCCCAATTGTGAGGGTCTCAGTTTGGGTCTGGGCCTATCCGCTGTGGCCATTGCCATCTCCTCGCCCGTCGCCGCaaacgccagcagcagcagcaacaacaacattatcaccaacatcaacagcctcagcagcaacagtttaagcagcaacagcttgagcagcagcaacaacagcagcagcagcaatcacagcaacaacaacagcaacaacacaacagcagcagcagcagcagtatcCACATCTGTTATAACAGCTTTGCCGccggcaacaacaccaaccaGCGCCATCGAGTTTGTGAAGAACGAGCTGGTGGACTCGCAGAGTCCATATACCACAGCGTTGAGCGCGGAACGCTTCCTCTTCGATGGCTTCCCGGATATCAAGCATGCAGTGAGTGTGCATCCGAGCAGCCTTAACAATATGGCCAGTGTGGCCAGTCTGGCggcgcacaacaacaacaatcatctAATGGACTTTCACAACTCGCTGCCGCACCATGGCagcggcgtcggcgtcggcgtcggcgttgGCATCATGACGCCCTGCTACGAGGAcgagcaactgttgctgatgaaGAACAGCTGCTATACGAACGATCTGCTCTCGCAGCTGGCGGACGATGATGCTGATTTCGTGGATCTGGATACGGGCGCCGCTGCCTTTATGACCAACGGTGGCTGCCTGGCGTGA
- Protein Sequence
- MFNSNMPATSLLSIEGSNFGAHTPKTPEILNSLIAMSNPLENYTFNASNSCSAASTPIVIRNFCGNTNGQLHSQDSSHSSCSASPLDSPAGTATTPSVQQTCSQLIKAGLKLSIQSKRKLSTCDSSSGSEQPTSKCSRRDEDCEESSDEDSETKSVPKGLTPEDEDRRRRRRERNKIAATKCRMKKRERTQNLIKESEMLDTQNVELKNQVRSLETDRRRLLEMVQTHLPNCVKRGGCQLPSKLLQSPALKYFAELELNGLLNGDNNASSAVNTPTQQQQQQQQQQQQQQQQQQQQQQQQQQQQRMQSIPSMSTFKFGSKSPVAMAAAVAAAQAQQQQQLQQQQQQLPNGYCKPSPSPQEFEHAGYLSSPTQEVLCLPQQQQQQQQQQQQSSLNPASNSNNADSNNATLLLSQQVSDYVPNCEGLSLGLGLSAVAIAISSPVAANASSSSNNNIITNINSLSSNSLSSNSLSSSNNSSSSNHSNNNSNNTTAAAAAVSTSVITALPPATTPTSAIEFVKNELVDSQSPYTTALSAERFLFDGFPDIKHAVSVHPSSLNNMASVASLAAHNNNNHLMDFHNSLPHHGSGVGVGVGVGIMTPCYEDEQLLLMKNSCYTNDLLSQLADDDADFVDLDTGAAAFMTNGGCLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00552054;
- 90% Identity
- iTF_01320942;
- 80% Identity
- -