Sred007930.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- cnc
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000774.1:142755-154909[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-16 2.1e-13 50.0 3.2 3 62 723 782 721 785 0.93 2 2 9.6 9.2e+03 -3.3 2.9 30 53 850 874 847 886 0.69
Sequence Information
- Coding Sequence
- ATGTCTATAACAATCTATTGTGAATACATACGCTTACCTTTGGATGAGCTGCTCAACGACGTGCTGCAACAATTTCCACTCGAAGACGACGAATTAGTCAACGATTCGGTTGCATCCACATCGcaggctgctgcagctgccgcctTGAAAAGTCAACCAGCAACGCGTATTGTTTCCGAAACTGGTGAGGAGTGTGCATTTACTTCCGATAACGATCTTGAGTGCAGCGACAAGGACAACGAAGCGAGCTTCTCGTCCAGTGATTTTGAGGATCTGCATGATTCGGTCGGCTCGAATCTGTTCGATTTAGATGAGGAGGCCAAAAAGGAATTAGATGAAATGTTGCAATCCACGGCACCACCATACCACCATCATGCTccccatccccatccccaTGCCCATCATTCAGCCCATCACCATGCCGCCGCCGCCCACCATCATGCGCACCATCAGGCGGTCGTTGCCCATCAGCGTGCGGTGCAAGCGAGCGCCAACTATGCCAGCATGGGCAGCTCCACGGGCAGCGCCTTTCAGCGTCAGCCGCCAGCTTCAGCCGGCTTCCATCATGGACATCATCAGGGCCGCATGCAGCGTTTGAATCGTGGCGTCTCCATGGATCTGGCCACCTATTTTAGCCCCATACCCAGCATGGGCGTCTCCGATATGCCCCCCTATCCACCCCACTACACGGGCTATTCGTATCAGGGTCcgggtggtggtgctgctgctggtccaGGAATGCCACCCAGTGCCCAACAGTACGGACAGGCAGCTGTGGCACCACCAACATCAttgccgccaccaccaccgccgcatCACAGTCACGCAATGTTGCATGCCAACTCCACATTGGGCGATCTATGCTCCACTCAACCCCATTATGGCCACAATCTGGGCTCAGCGGTCTCATCCAGCATGCATTTGACGAACTCGAGCCATGAGGCCgatggagctgctgctgcggctgccgctgccgccgccgctgctgctgccgcaagTGGCAACTACAAAATGGAACATGAGATGATGTATTATGCGAACACCTCTTCGGACATGAATCACACGGACGGCTTAATGAATTCCTTTTTCAACGATGAGGATCTGCATTTGATGGATATGACGGAAAGTTTCTGTCGCATGGTGGACAACAGCACAAGCAATAACTCATCAGTTTTGGGTCTACCAAGCAGTGGACATGTCAGCAATGCCGGCAGCTCAACACTGAATCATGCGAATGCCAATGGTGTGGCAACTGTAACGGGTGCTCTACCGATGAGTGGTGCAGCCGGAGGTGCTGCCGCTGGAGCCACTGGTGGCATGACCAGCGATCTATTGGCCAATACTGGTGCTGGCGCTCAGGGTGGCGCACAGGATCGTTTGGACGCGTCCAGTGACAGTGCGGTTAGTTCGATGGGTTCCGAACGGGTGCCATCGCTCTCAGATGGCGAGTGGGGTGAGGGCAGTGATTCGGCTCAGGATTATCATCAGGCCAAGTATGTGGGCCCCTATGATTttagttacaacaacaacaacaccaacaacaacaacagcaacaatagtgGCACACGCCAACCGCCTGTGGCACAAAAGAAACATCAGCTATATGGCAAGAGGGATCTGCACAAACAGACGCCAAGCAATGCAGCGCAACAGACACCAGtggtgcaacagcagcagccaacacaGTTGCAACAAAACATCAAATATGAATACGAGTCAAATGCGGCAGCATCGTTCATTGTTAATGACGCAGCCGGCTTGGCACCGGCCCAGGCCAAGGATTACCATCAGGCGTATGGGATGAGTGCGGCAAGTGCATTCACCGCCGATTATGGCATGCCACGCCCCCCACTAACACCCCAGGGCATTGTTAACCTCAATCACACGTACTCGCTGACCCAGGGCACAGGCGGAACGCTGCCCCAGGGCAGTGGATCCCAGAGCAGACCGCATCCACGCGACAAGAAGCTCTCGACGGGCAGCAGCAAGCACAGCTCGAAGTCCGGAGACGACAGTCTGACCGAGGAGGAGCATCTGTCCAGGGATGAGAAGCGTGCTCGCTCCCTCAACATACCCATTTCCGTTATGGACATCATCAATCTGCCCATGGATGAGTTCAACGAGCGTCTGTCCAAATACGATTTGAGCGAGAATCAACTGTCGCTCATACGCGACATTCGGCGGCGTGGCAAGAACAAGGTTGCCGCACAGAACTGTCGCAAGCGCAAACTGGATCAGATCCTCACCCTCGAGGATGAGGTGAATACGGTGGTGAAGCGCAAGTCGCAACTCAACCACGATCGTGATCATCTCGAGGGCGAACGCAAACGCATCTCCAATAAGTTCTCCATGCTGCATCGTCATGTCTTTCAGTATCTTCGCGATCCTGAGGGCAATCCTTGCTCACCAGCTGATTTTAGCTTGCAACAGGCAGCTGATGGTTCTGTTTACCTGCTGCCACGTGACAAAACCGATAAtggcacaacagcaacagctgctgccagCGCCGTTTCGGGCAgcagtagtagcagcagcagcagcagcagcgtacAACAACAGGCGGCgccactgcagcagcagcaacatcatcatttgcaacagcagcagcaacaatcgcGTCTGCCGCCAcatttgcaacagcagcaacaagcaacgcATCATCAACTGTTGCcactacagcagcagcaacagcagcagcagcaacaacaactacaacaacagcaacaggcgcCGCATCCGCATCACAAGGAATGA
- Protein Sequence
- MSITIYCEYIRLPLDELLNDVLQQFPLEDDELVNDSVASTSQAAAAAALKSQPATRIVSETGEECAFTSDNDLECSDKDNEASFSSSDFEDLHDSVGSNLFDLDEEAKKELDEMLQSTAPPYHHHAPHPHPHAHHSAHHHAAAAHHHAHHQAVVAHQRAVQASANYASMGSSTGSAFQRQPPASAGFHHGHHQGRMQRLNRGVSMDLATYFSPIPSMGVSDMPPYPPHYTGYSYQGPGGGAAAGPGMPPSAQQYGQAAVAPPTSLPPPPPPHHSHAMLHANSTLGDLCSTQPHYGHNLGSAVSSSMHLTNSSHEADGAAAAAAAAAAAAAAASGNYKMEHEMMYYANTSSDMNHTDGLMNSFFNDEDLHLMDMTESFCRMVDNSTSNNSSVLGLPSSGHVSNAGSSTLNHANANGVATVTGALPMSGAAGGAAAGATGGMTSDLLANTGAGAQGGAQDRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHQAKYVGPYDFSYNNNNTNNNNSNNSGTRQPPVAQKKHQLYGKRDLHKQTPSNAAQQTPVVQQQQPTQLQQNIKYEYESNAAASFIVNDAAGLAPAQAKDYHQAYGMSAASAFTADYGMPRPPLTPQGIVNLNHTYSLTQGTGGTLPQGSGSQSRPHPRDKKLSTGSSKHSSKSGDDSLTEEEHLSRDEKRARSLNIPISVMDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNTVVKRKSQLNHDRDHLEGERKRISNKFSMLHRHVFQYLRDPEGNPCSPADFSLQQAADGSVYLLPRDKTDNGTTATAAASAVSGSSSSSSSSSSVQQQAAPLQQQQHHHLQQQQQQSRLPPHLQQQQQATHHQLLPLQQQQQQQQQQQLQQQQQAPHPHHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01326138;
- 90% Identity
- -
- 80% Identity
- -