Sred002971.1
Basic Information
- Insect
- Scaptomyza reducta
- Gene Symbol
- Jra
- Assembly
- GCA_035044485.1
- Location
- JAWNNV010000297.1:1855226-1856195[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-17 2.2e-14 53.2 8.3 2 65 219 282 218 282 0.96
Sequence Information
- Coding Sequence
- atgaaaatatctGCCGCTTCCGCTGCTGCGCTCGCCAGCAATACGAACAGTAAGAATTCTAACGCCACACCGATCGTACCTAAGACTGAACCGGAACCAACTACAACTGAAGAGTCAATGGAATTTCAGACACCAAACAGCAGCTCTACCCCAAACGTCAGCAAACGTCCTGCCTTCTTGGACctcaacaagaaaaacaagcgCGCCATTGCGCCTCTGCTGATTGATTCGCCTGATGTGCCTGGCAAGACACTGAATACACCTGATCTGGAAAAAATCTTACTATCGAGCGCCATGTTGCAAACACCACAGCCGGGCACTGTTTTTCCCACTAAAGTGGGTCCCATCACCACTGAACAGGAGGAGTTCGGCAAGGGTTTCGAGGAGGCACTGCAAAATCTCCATACCAGCAAGAACACCCAAGCGTTGATGGGCAGTATTGCTAACGTTGTAACGAGCAACaatgctgctactgctgctcctcctgccAGTAATCCAGCTACCGTCGCAACCACAATGACAGCTGTTAATAATGGCATCAGTGGAGGCACCTTCACCTACAACAACGTTGaTGGTTTTCCCGTCATCAAGGATGAGCCAAATAATGCTGTAAGCTCACCAACAGTTAGTCCTATCGATATGGCCGATCAGGAAAAGATTAAACTGGAGCGGAAACGTCAACGGAATCGTGTAGCCGCCTCCAAGTGTCGCAAACGCAAGCTAGAGCGCATCTCAAAGCTGGAAGATCGTGTTAAAGCGCTCAAGGGCGAAAACACCGATTTGGCTGGCATTGTTAAAGGTCTCAAAGATCATGTTGCACAGCTGAAGCAACAGGTCATGGAGCATGTGGAGGCCGGTTGCACCGtccaacaaattgcaaacgCTGCCCTGCTTGCGGGCAAATAA
- Protein Sequence
- MKISAASAAALASNTNSKNSNATPIVPKTEPEPTTTEESMEFQTPNSSSTPNVSKRPAFLDLNKKNKRAIAPLLIDSPDVPGKTLNTPDLEKILLSSAMLQTPQPGTVFPTKVGPITTEQEEFGKGFEEALQNLHTSKNTQALMGSIANVVTSNNAATAAPPASNPATVATTMTAVNNGISGGTFTYNNVDGFPVIKDEPNNAVSSPTVSPIDMADQEKIKLERKRQRNRVAASKCRKRKLERISKLEDRVKALKGENTDLAGIVKGLKDHVAQLKQQVMEHVEAGCTVQQIANAALLAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00499332;
- 90% Identity
- iTF_01325408;
- 80% Identity
- -