Spol017875.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza polygonia
Gene Symbol
nfxl1
Assembly
GCA_035044585.1
Location
JAWNNU010001673.1:270619-273721[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.7e+04 -8.1 6.4 15 19 148 152 147 152 0.82
2 20 0.13 1.8e+03 -0.3 0.4 4 10 183 189 182 189 0.95
3 20 6.5e-08 0.00089 19.8 15.5 1 18 197 213 197 214 0.98
4 20 1 1.4e+04 -3.2 2.7 6 10 240 244 239 244 0.89
5 20 1e-07 0.0014 19.2 16.9 1 19 250 269 250 269 0.98
6 20 1.2 1.6e+04 -3.4 0.9 5 10 293 298 293 298 0.92
7 20 4.6e-07 0.0063 17.1 13.1 1 19 304 323 304 323 0.96
8 20 1.6 2.2e+04 -3.8 0.8 6 10 347 351 346 353 0.54
9 20 1e-07 0.0014 19.2 11.8 1 18 357 374 357 375 0.96
10 20 0.7 9.6e+03 -2.7 0.4 1 5 384 388 384 393 0.73
11 20 0.022 3e+02 2.2 15.9 1 18 409 426 409 427 0.94
12 20 3.3e-08 0.00046 20.7 14.7 1 19 436 454 430 454 0.90
13 20 1.1 1.5e+04 -3.3 2.0 6 10 482 486 482 486 0.98
14 20 5.4e-05 0.74 10.5 7.2 9 18 499 508 497 509 0.90
15 20 0.027 3.8e+02 1.8 5.7 1 11 521 530 521 531 0.95
16 20 1e-05 0.14 12.8 3.1 1 11 596 606 596 607 0.96
17 20 2 2.7e+04 -4.2 0.9 5 10 622 627 622 627 0.86
18 20 0.023 3.2e+02 2.1 15.4 3 19 636 652 635 652 0.92
19 20 6.8e-07 0.0094 16.6 11.8 1 16 703 717 703 723 0.90
20 20 0.61 8.4e+03 -2.5 0.5 11 16 753 758 753 759 0.80

Sequence Information

Coding Sequence
atggaaaagtttaataaagTGCAGGCGAAGAATTTGGCAGCCGCAAAGAAGCTAGTGGATGTTTATGCATCAAGTTCGGAGGATGAAGGCGAACTGGATGAAAAACACATACTGGATCTACTTTACAAGCATTATCATTCGTTGCCGGATAACTCGAATGGCAGCAATAATGCAAATCGTACAGCTACTTTCTTGGAAAACACTCTTCACTCGGGAGCGGCGACCTGCCTGATTTGTATTGGCAGCATCCGACGTGTAGAGGCTATTTGGTCCTGCAAGTCATGCTACTGTTTCTTTCATCTTAAGTGCATCCAGCGCTGGGCTAACGATAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAGCAAAATGGCAATCAGGGACACTACAATCATCTTGGCGAGTTTGTGCCACCAAAGCGCCCGAAATCGTTGCAATGGTGCTGTCCACAATGCCGAACGAACTACCAGCCTACTGATCGGCCCACCCAATATGAATGTTTTTGCAGTAAAGAGGTGAATCCAGAGGCACAGCCTTTTCTGGTGCCGCATTCTTGCGGCGAGATCTGTGGCAAGCTGCTGCAGCCTAAATGTGGCCACGATTGCAAGCTACTCTGTCATCCTGGTCCGTGTCCCCCATGTGCCCAATTAGCTCATAGTTCCTGTCTGTGTGGCAAATCGCCGCCACGCTCCGTACGCTGCATCGACAAGAATTGGCAATGCCAGCAAACGTGCCAATCTTTATTGGCCTGTGGCAAGCATAAATGCAGCCAAAGATGCCATCGTCCTGGCCAGTGTCCGCCATGCAGCAGCAAGAGTTCTCAGTACTGCGATTGTAAACGTGAACAACAAGTTGTCAACTGCGCAGAACCAAAATGGAAgtgtaaaaatATTTGTGGCGCTCTGTTTGATTGTGGGCTCCATAGCTGCGACAAGGTTTGCCATGCTGGTTCCTGTGGCGGTGAGTGTCCCTTGGGCGTTCGCAGTTGCCCGTGCGGCAAGAACATTAAAACTGGCGGCTGCAGCGAAGTGCTGGAGACCTGCGGTGACACGTGCCAAAAGAAATTGTCGTGTGGCAAACATAGCTGTGCCCAACGCTGCCATCGCGGTCCTTGCAACCTGtgcCTGGTGCGAACCAAGAAGAAATGCCGTTGTGGGCTGCATGAAAAGGAGCTACCCTGCTCCAAGGATTTCAACTGCGAAACCAAATGCAAACTGATGCGCGATTGCAATAAGCACGCCTGCAATCGCAAGtGCTGTGGGGATCAGTGTCCGCCATGCGAGAAGATCTGCGGGAAACAGTTGAGCTGCAATAAGCACaagtgccagagtgtgtgccacaATGGACCATGTTATCCGTGCAAGTTAGAGTCGCAGGTCAATTGTCGCTGTGGCAAAACACGACGCAGTGTGCCTTGTGGCAGGGAGAAAAGTGCACGTATTGTGTGCCAGGAGCTCTGTCGAATCTCGGCCAAATGTCATCATGCTATTAAGCATCGATGCCACAAAGGCGAGTGCCCGCCATGCGCTCAGCAATGTGGATTACCCAATGATACCAGCGGCTGTGGACACATATGCAAGGTGCGCTGCCATGCAGCCATACGTGTGCCCAAGCCAGCAGATGCAGTGCGTCCGCATTCCAATAAGTACGAATACCTTGCACAGCCGCATCCGCGTTGCGACGAAGGTATTAGTGTCACCTGCATTGGTGGTCATGAGATCGCCACCAGGCCGTGCTGGAACTCCAAGCCAACGTCTTGTGCGCGCAAATGTGGTCGGCAGTTAAAGTGTGGCAATCATAAGTGCGCACTATTTTGTCATGCGGTGCCTAATCTCATGGATATGCAGCAGCAAGTAGGCTGCGCTAAATGCGAGCAGGGATGTGCTTTTGCTCGCCCTGCTGGCTGCACCCATGCCTGTGCCAAGGGCTGTCATCCTCCTCCCTGTGCGCCATGCAGTTTTGTAATCAAAAACAAGTGTTATTGCGGCCTCAACCAGGTTATTTACAAATGCTGCGAATTTTACAACGATGAGGGATCGGTGCTTGAAATCCTTGAGCGCCGACAAAAGTTGTGCAGCTGTGGCAATCGTTGTTTGAATAActttGCGTGCGGTCATCGCTGCATGACCATTTGTCATCCCGGCCCGTGTCCTAATCCTGAAATGTGTCGCAAGAAAGTGCGAATTTATTGTGCTTGCAAGCGCATCAAATTGGAGATAGCCTGTGACAAGCATCGAGCTGGTCAAACATCTTTGGACTGCGATGGCAATTGCCAAGCAGAGCGCTACAAGTCAGAAGCAAcggagcagcaacaattggAGTGCCGTTTGCGGCAGGAAGAGGAAAAGAATCGTATAGAGCTCGAGAAAttcgagcaaaagtttggcAAGCGTAAGCCCAAAGAGCGCAAAATGATTGATGTCCAGTCGACCAAGTCTATAATTGATTGGAAACGTTGGGCCATCTATGCAGTAGCGCTTATTGCAGCACTAGTCGCTCTTGCAGTGGCTTACTATGCGGAGAGTTAA
Protein Sequence
MEKFNKVQAKNLAAAKKLVDVYASSSEDEGELDEKHILDLLYKHYHSLPDNSNGSNNANRTATFLENTLHSGAATCLICIGSIRRVEAIWSCKSCYCFFHLKCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRPKSLQWCCPQCRTNYQPTDRPTQYECFCSKEVNPEAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSPPRSVRCIDKNWQCQQTCQSLLACGKHKCSQRCHRPGQCPPCSSKSSQYCDCKREQQVVNCAEPKWKCKNICGALFDCGLHSCDKVCHAGSCGGECPLGVRSCPCGKNIKTGGCSEVLETCGDTCQKKLSCGKHSCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKDFNCETKCKLMRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRISAKCHHAIKHRCHKGECPPCAQQCGLPNDTSGCGHICKVRCHAAIRVPKPADAVRPHSNKYEYLAQPHPRCDEGISVTCIGGHEIATRPCWNSKPTSCARKCGRQLKCGNHKCALFCHAVPNLMDMQQQVGCAKCEQGCAFARPAGCTHACAKGCHPPPCAPCSFVIKNKCYCGLNQVIYKCCEFYNDEGSVLEILERRQKLCSCGNRCLNNFACGHRCMTICHPGPCPNPEMCRKKVRIYCACKRIKLEIACDKHRAGQTSLDCDGNCQAERYKSEATEQQQLECRLRQEEEKNRIELEKFEQKFGKRKPKERKMIDVQSTKSIIDWKRWAIYAVALIAALVALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01324578;
90% Identity
iTF_01323792;
80% Identity
-