Basic Information

Insect: Scaptomyza polygonia
Gene Symbol: -
Assembly: GCA_035044585.1
Location: JAWNNU010000909.1:464016-476282[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.8 8.5e+02 1.4 0.3 2 21 1067 1088 1066 1091 0.63

2 9 0.0038 0.41 11.8 0.7 1 23 1097 1120 1097 1120 0.96

3 9 0.28 30 5.9 2.2 1 23 1125 1148 1125 1148 0.93

4 9 2.5e-05 0.0028 18.6 0.9 3 23 1374 1395 1372 1395 0.93

5 9 0.0052 0.56 11.4 1.3 2 23 1404 1425 1403 1425 0.96

6 9 0.87 94 4.4 0.8 1 23 1432 1455 1432 1455 0.94

7 9 1.6e-05 0.0018 19.2 1.4 1 23 1461 1483 1461 1483 0.97

8 9 4.6e-06 0.00049 21.0 1.4 1 23 1488 1510 1488 1510 0.99

9 9 0.00022 0.024 15.7 5.2 1 23 1516 1538 1516 1538 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.8	8.5e+02	1.4	0.3	2	21	1067	1088	1066	1091	0.63
2	9	0.0038	0.41	11.8	0.7	1	23	1097	1120	1097	1120	0.96
3	9	0.28	30	5.9	2.2	1	23	1125	1148	1125	1148	0.93
4	9	2.5e-05	0.0028	18.6	0.9	3	23	1374	1395	1372	1395	0.93
5	9	0.0052	0.56	11.4	1.3	2	23	1404	1425	1403	1425	0.96
6	9	0.87	94	4.4	0.8	1	23	1432	1455	1432	1455	0.94
7	9	1.6e-05	0.0018	19.2	1.4	1	23	1461	1483	1461	1483	0.97
8	9	4.6e-06	0.00049	21.0	1.4	1	23	1488	1510	1488	1510	0.99
9	9	0.00022	0.024	15.7	5.2	1	23	1516	1538	1516	1538	0.99

Sequence Information

Coding Sequence: ATGCCAGCGCCAAGGGTGGCCCAGGATACGGCTACTAGTACTATTGCCTGCCAGCCCCAGGACAACATCAAAGCCATCTCACGTGACGATGGCTTGCCCCAAGAGATATGTCGTCAGTGCAAGGCCCAATTCATAATGATTGCCAAATTCCGTCGTCGTTGTGTGCGCGTACAGCAACGTTTCCACGAACACCTCCAAGACGTAGTCGAGCGCAAGTCAAAGattgagcagcagcaaacttTAGAAACACAGCAGCCACAAACGCAGCCACTGGCACTGGCCGGCGATTACATCCATCTGCCGGAGACACAAATGGAGCGCAAGCGTCGCATGATGCCAAACACAGAATCGGAGGTGCTGCCGTCGCCACCAAAGCAAGCCAAGACTGAAGCCGCACTACCTTCGATGCCGTCCAATTCACAACGTTGGCAGAtgcgtatgcgcaatgtgCGCATCAACTCCTTGCCAGCCGGCGTCGTTGAGTCTGAAACGGCCATAAGAACAGCAGCGATGAAATGCGACGGCCGCTTAAATCAAATAGCACAGCTTGAAAATGCACCACAAAGATCGCCATCGTGGAGAACAAAAGCGGCACGCAAACAGCTCTCAGAAACTTCGTTCACAAGCTCCACAAAATCCTATTATCAAGATGGCAACATAATCGCGCCAGAGCTTGACTCGTCGTCGTCGgctaaagcagcagcagcagccgcagctgcCGCAGCTGCAAACTCGTCAACGGAAACAACAGCTTCACCCGAACAGTTGAGCGATGTGTCTGTGCCGCCATGTCTGGGCTTTGAGAACGATGATCGGAGCAGCACTGCATCCAGTTCCACAACAACTGGCGGCTCTCCAAGCACTCCGGTTACCAATAATATTCAACACGATTTCCCACCAAAACGGATTTTACGTTCTCACAAATTGAGGCGTGGGCACAAAAAGATGACCGAGGACCTAGCAAAGGTTGACCAATGGATCGAGGAAATAAAACCAATTGACAACAACACGCCAAATAGCTGTTTCACTGAGCAGCAATCAAACAGCAAcactagcagcagcaacagcagcagcccaaCTGTAAGTCCAGCATCTAGCATTGGCAGTCAATCCGATGAGAAAGAAAGTGAAGAACTCTCAAGTGATCGGGCATACAAAGAAGAAAAGCTCGAGGTTGAGAAATTGGAATCAATGCCACAAACTGAAGACATTTTGTCAGCAATAGGAGTACAAATAGCTAAAGAGACCCAGTCGGTCGGACCTGTGCAGCTGGAGGAATTAAGCTCATCCAATCTACATTCAGATAATAATCAGCTGGAGGAGCATAAACGACAGCAATCTCTAACGCCTGAAGTGCCAACCGTAGAATGCGAAGTGGAAGTGGCGCAAACGTCGGAACTGATAGTTAGTATCCCGCTAGATGCGCTCAGCGAGGATCTGCAGCGTAAACTATGCAGCGATGCCGAGTTAGATATGGAAGTGCCCGCCGCAGAGTCACTGGAAGGCGATGGCGGAGAGTCTAAGGAGACTGTCGAATACGACGATGTGAATAACAATGGGAATGCCGAGCATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTAGCACTCGCAACCAAACCGATTGAAGCGGAACCCATTGGAGGCAGCACCGACGGCGGTGGCAATATCGAATCCATAGAGAAACTAGCTTATCTACAACAAGCtgagccgcagcagcagcaacaacaacagccacaaatTGCTGGCAGTAGTTCGATGGATTTCTTAGCTGAATTCGAAAATCATTGTGAGAAAACACTAAAACCTCCTCAGTTGGCTGGTGGACCCGCTGAGCTGGCGGTGGCCAAACAGCAGCTGGAAGTCGAAATGAACGATGTGGCAAATACGCTGCATGGCATACTCAATGAGATGCAGGATGAGCATCTCTATACGCCAATTGAAGAGTTTCTAAATCGTACCGATTATGTGTCGCCAACGTCGGCATCGCCTAGTTTCTATGACACGCCAGTTGAGATACAGCCGCCagtgctgcagcaacaacaacagcaacaacaacaacagccacagccacagcagctgcaacagaaGGAGGGGGATAATCTTTATAGTAGCAACACTTTTGGCAACGAGCTCATCGGATTCCAAAATGATATGCCCTGCTTTGAGAATATCGAAACAACGCCCGAACCAATGAATATGCAGCAAATTCTGCAAATGGAGTTAAATAAGCTTTTCACCGAATTTCCGCCAGCAatacaacagcagctgcagcaaccaatacaacagcagcagccgccgcagccaatacaacaacagcagcagcagcaaccaataccacaacagcagcaaccaatacaacaacaacagcagcaagtgcaaccaatacaacaacaacaacagcagcagcagcaagtgcagccaatacaacaacaacaacagcagcaagtgCAACCAATACAACAGCAATTGCAGCTGGAACAGGAAACTGTCAGCTACGAGCCACTGTATCAAACAGCAACAGTTCCTCTTCCTGCcaactacaacagcagcaaatatCATATCATACAAATGACGCCACAAGAGACACTGTGGCATGCACAGCAgcttcagcaacaacaacaacaacaactgcaacagcagacgacaacaacaacaacacatgtGCAATGGTCCACTGTTGGTGGCCTGGAGTCGATTAAGGCAACGCCCAGTCTGGATAACAATCtagacagcagcaacaacaacaacaacaataccacCTACTACATCAATGCCACTGATCTCTATCAAACACAAcctcagcagcaacaacagccgaCTGATGCTTATGCTCTGCTCGACAGCAATGACAATTATGTGctcgagcaacaacaacaacaacaacagcagcagcaacaacagcagcagcaacaacccaTTATGATACTGATACAGCAGCCCGAATTGCAGCAACCGGTGGCATCAGCCAGTAATCCACAACAGGCGCCACTGCACATAAGCTACAGTAATGAAATGCAGACttatcaacagcaacagcaccaacaacaacaacattcacatacacagcagcaacaacatccacatccacatccacaaccacaacagcaacaagtaCAAAATACAGTATTAGGCTTaaacaacaatgttgcaatGGTGCCACGCCAACGTGGTCGGCCGCCCATGTTAAAGTGTCGCTACTGCCAGAAGGGGCCACGTTTCTCTAGCAATCTGGAGTACAGTAACCACATTATTGAGCTGCATCCAGCCGTTGCGCCATTCACCTGCCCGCATTGCCCGCTGGCCTTTGCCGGTCGCAGCAAGCGCAACCAGCATATTCTCAATAGTCATATGGTGCAGAAGTTTCAGTGTGGCCAATGCTCACAAATGTTTCCCTCGCAGCGTGCGCTCGATTGTCATTTGCAACGTTTTCACATGCCACTCGTCACTGAACCGACAACTTCAAGTGTTCCAGTAGCTGttgcagcaccagcagcaacagatgGCGTGCGTCTGGAAGAGGTTAAACTGCGCATTGCAAGCAACAAtgatcaacaacagcagcaacaccatcaccatcatcatcagcagcagcagcagcagcagcagcaatcagctTTTAATATACCGGTTTTGGAATCACAAACAAGCTCAACCCGGCCACGCAGAACGCGCATACTGTGCTGTCCGGACTGCGAGGACTGTTCAACGTCCGGTGGACACAGTCACAGTCATGGCAGCGTACATTCGTACGAGGAGCTTAATACTTTGCAACCACCACCGACGGCATTGACACCGCCTTCGACAATTGCATCGTTGCCATCGCCACAGCCTCCACCACTGCACATAACGCTGCCGTCACCGGAGCAATCGGAGCCTGACTCGACAACGGCAACGTTGCGCCAATTTCGTAAACGTtgcaccacaacaacaacaacaacaacaataatggctgcatcagcagcaggagcaacaacaacaacatcaacatcggCAATATCAATGTTAACAGCTGTCTCGCCATCACCCTCATCATCGCCATCATCATCGACGATGGCCGAGACGAGCGTCACGCAACTGCAGCTTGGCAAACTGCATGGCAGTCATCTGTGTGTGATTTGTGATAAGAGTTTCACGAACAACATTGCACTGCGCAAGCACCAACAACTGGCCCACGATTCGCAGACAACTATGCCGTGGAACTGTTCGATCTGCAAGCGCGGCTATAGGAAACGCACCGACATGGACAACCATATGAAATCGCATGATCCCAAGGGTCGACCGCATGAGTGCAATGAGTGTTTGGTGCGCTTTCCCGAGTTCAATCAACTGGCCATGCACAAATTCACCGTGCACGAACTGATCAAGCCGCATACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCATGGTGTGCGCGGCTTCAAGTGCGAAGAATGCGACGAGGCATTCGCATATTTTAAAGATTTGCGCAAACATCGGCGCACCCACAACTGTGACCTATTTTACAAATGCGATTATTGTCCTCGCACGTTTCAACATTTTACGAGCTATCGTGacCACATGAACACCCACCTGCCGTTGGGCGTGTACATCAACGAAAAGATGCCCAGAAGTGTATGCAGCAAAGCCGAGAATCCAAAAAGCACTGACGAATCTCTGATGCCATTAACGCCGCTTAGTAATTGCAATGGTAACAGTGGCAGTAACAGTGGATTAGATGATTGTCCCGGCTCTGTGGAAATGGTCGTGGGAAGCAGCATGGCAACACCATCGATGGACATGATTGTGGATACGCCATAA
Protein Sequence: MPAPRVAQDTATSTIACQPQDNIKAISRDDGLPQEICRQCKAQFIMIAKFRRRCVRVQQRFHEHLQDVVERKSKIEQQQTLETQQPQTQPLALAGDYIHLPETQMERKRRMMPNTESEVLPSPPKQAKTEAALPSMPSNSQRWQMRMRNVRINSLPAGVVESETAIRTAAMKCDGRLNQIAQLENAPQRSPSWRTKAARKQLSETSFTSSTKSYYQDGNIIAPELDSSSSAKAAAAAAAAAAANSSTETTASPEQLSDVSVPPCLGFENDDRSSTASSSTTTGGSPSTPVTNNIQHDFPPKRILRSHKLRRGHKKMTEDLAKVDQWIEEIKPIDNNTPNSCFTEQQSNSNTSSSNSSSPTVSPASSIGSQSDEKESEELSSDRAYKEEKLEVEKLESMPQTEDILSAIGVQIAKETQSVGPVQLEELSSSNLHSDNNQLEEHKRQQSLTPEVPTVECEVEVAQTSELIVSIPLDALSEDLQRKLCSDAELDMEVPAAESLEGDGGESKETVEYDDVNNNGNAEHFCQSATADSFNAAVALATKPIEAEPIGGSTDGGGNIESIEKLAYLQQAEPQQQQQQQPQIAGSSSMDFLAEFENHCEKTLKPPQLAGGPAELAVAKQQLEVEMNDVANTLHGILNEMQDEHLYTPIEEFLNRTDYVSPTSASPSFYDTPVEIQPPVLQQQQQQQQQQPQPQQLQQKEGDNLYSSNTFGNELIGFQNDMPCFENIETTPEPMNMQQILQMELNKLFTEFPPAIQQQLQQPIQQQQPPQPIQQQQQQQPIPQQQQPIQQQQQQVQPIQQQQQQQQQVQPIQQQQQQQVQPIQQQLQLEQETVSYEPLYQTATVPLPANYNSSKYHIIQMTPQETLWHAQQLQQQQQQQLQQQTTTTTTHVQWSTVGGLESIKATPSLDNNLDSSNNNNNNTTYYINATDLYQTQPQQQQQPTDAYALLDSNDNYVLEQQQQQQQQQQQQQQQQPIMILIQQPELQQPVASASNPQQAPLHISYSNEMQTYQQQQHQQQQHSHTQQQQHPHPHPQPQQQQVQNTVLGLNNNVAMVPRQRGRPPMLKCRYCQKGPRFSSNLEYSNHIIELHPAVAPFTCPHCPLAFAGRSKRNQHILNSHMVQKFQCGQCSQMFPSQRALDCHLQRFHMPLVTEPTTSSVPVAVAAPAATDGVRLEEVKLRIASNNDQQQQQHHHHHHQQQQQQQQQSAFNIPVLESQTSSTRPRRTRILCCPDCEDCSTSGGHSHSHGSVHSYEELNTLQPPPTALTPPSTIASLPSPQPPPLHITLPSPEQSEPDSTTATLRQFRKRCTTTTTTTTIMAASAAGATTTTSTSAISMLTAVSPSPSSSPSSSTMAETSVTQLQLGKLHGSHLCVICDKSFTNNIALRKHQQLAHDSQTTMPWNCSICKRGYRKRTDMDNHMKSHDPKGRPHECNECLVRFPEFNQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGVRGFKCEECDEAFAYFKDLRKHRRTHNCDLFYKCDYCPRTFQHFTSYRDHMNTHLPLGVYINEKMPRSVCSKAENPKSTDESLMPLTPLSNCNGNSGSNSGLDDCPGSVEMVVGSSMATPSMDMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -