Spol021640.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza polygonia
Gene Symbol
hang
Assembly
GCA_035044585.1
Location
JAWNNU010001923.1:208929-233970[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.34 37 5.7 1.0 3 23 491 512 490 512 0.93
2 18 0.97 1.1e+02 4.2 3.2 3 22 617 636 615 636 0.89
3 18 0.00073 0.079 14.0 3.3 1 22 728 749 728 751 0.90
4 18 0.084 9.1 7.6 0.1 2 21 763 782 762 783 0.93
5 18 0.00084 0.091 13.8 0.2 2 23 920 942 919 942 0.95
6 18 0.0024 0.26 12.4 0.1 1 23 950 973 950 973 0.96
7 18 0.0031 0.33 12.1 0.1 3 23 1056 1076 1055 1076 0.93
8 18 0.00035 0.038 15.1 2.9 2 23 1194 1216 1193 1216 0.97
9 18 0.027 3 9.1 0.2 2 23 1225 1247 1224 1247 0.95
10 18 0.0016 0.18 12.9 0.3 1 23 1260 1283 1260 1283 0.97
11 18 0.00015 0.016 16.2 1.1 1 23 1333 1355 1333 1355 0.99
12 18 0.0024 0.26 12.4 0.9 1 23 1363 1386 1363 1386 0.96
13 18 0.56 61 5.0 0.3 2 19 1394 1411 1394 1412 0.94
14 18 0.00018 0.02 15.9 0.3 3 23 1498 1518 1497 1518 0.97
15 18 0.0061 0.66 11.1 0.1 1 23 1553 1575 1553 1575 0.97
16 18 0.00072 0.078 14.1 0.6 2 23 1654 1676 1653 1676 0.93
17 18 0.058 6.3 8.0 1.4 3 23 1732 1752 1732 1752 0.98
18 18 4.4e-05 0.0048 17.9 2.5 1 23 2170 2192 2170 2192 0.99

Sequence Information

Coding Sequence
ATGCTGTCAAGCCAAAGGACGTGCGACATGCATTTGGATTTCACTACTATCACATCCGTGGATCGACTATCGCTGCATATTTGCCATGCCTGTATTAGTTATTTGAACTCTTGGCAAAGCTTTAAAAATCGCTGCCTCAGCTCACAGAGCAAGCAACTTCAATGGCTGGAAAATGATAAGACCAAACAGCAGACGCTTCTCGGATATTTGGATTTGAACAGGGCTGAGAATGGCAGTGGTGccattcaacaacaacaacagcagcagcaacacgaATTAAAAATCGATGCAGCGACGAGTGCAGCTGAAATGACATCCACTGCCGCCAACATTTTGGATGGCATACCTTTACTGAAGAAACGCAAATCGTTAACAGTCTATGTGAGTCCAAAGCAACAGCTCctacagcaccaacaacaacaatcgcaaCAGCTTCATCAGCAAGAACAATCGCTACTACTAACACAGCATCAgcttcagcagcaacagtcacAGCAacagcgtgcaacaacaacaaaagcagcagcagcaggaagaGCAACAAGCGCTACGGCGGCGACGGCGACAGAGTCACACCAAACGTTACAAACCCTTTTGTTGCAGGTACCCACAGCGAcaacgcaacagcaacagcagcgaaaatatcaacaccaacaacagctacatcagcagcaacgtggcaagcagcaacatcaccatcatcatcagcaacattatcatcatcatcaggaacagcagcagcgacggaGTCCCGTGCGTCAACCGcgacgccaacaacaacagcagaagcaACATGCATCAACAGCACCCGTACAGCGTTTGTCCGACAAATTAAAGCCAAAATTGTATTTGCCTTTGAACATAACAGTGCCACCAATTTTGCCCCCGCCAATGCTGCAGTCAGCCACGTTGTCAAATGCTGCTGATGCAGCAGCGCTGTTGCCATTGCAGTTGTCGCTGCCACTTGATTTCAGTCAGACTCTAAATCCACAACTCAATTCAAATCATAGTCAAAGACAagcgccgccgccgccgttgCCCCGAGTTGCTGCAACAATGACCAGCAACACTGCTGCCTCTGCTTTAGCCACTGCCACTTTTGGCTCTGATTCTGGCGGTGCAGTTTCGACTCCGTTGCTAATGCCGGTGACGCTGCAGAGCGCTGCCCAACAGCTGCGCTTTTTCAGGCGCCATTCCTATAACAATCCTCTGCCTGCCGTGCCCATCAAAGATGAGCCTCTAGACGACACGGATGATGATTTTCAAATGAAATGCATCGATGAATCGGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAAGGCGATGTGCCACTAAATACTGCCGACTATGATTATACGGCTCAACATTGCGTGACGGCAGTTGCGGCGGCAGCATCATTGCCCGCCAGCGCTGTTGCAAATGTAGCCGCCGCTGGCGATTCCAAGGTGGCCAGTTGCCGTGCCTGCAGTCTACAATTCTCTACGCGGGCAAATGCGCGACGCCACGAGCGCAATTTGCATCCGAATCTGTTTCAATTGTCGACAGACTCACCAAATAATACGCCCATTACAAAGCCGACACCAGCACTGGCGGCTGCTTTAGAGATACAGCGTGCTGCAGCCGCAGCCACCGCcgaagcaacaaaagcagctgcTGGTGGCAATATTTCGGCACAAAAGTATCGACAGGTGGTAATGAACACGTTTATCAAGTGTGAAAACGGTGGTTTCGACTACGACAATCCCGAGCATTATCAGCAACTGTTGTCGCGCGACAAGGTCGACTTCATTCATGAAAACAACGAGTTTCTGGAGCAGTATCAGACAATGACATGTCGCTGTTGCAACAAATACTTCAATACCTACAAAAACTTTATGGCACATGTGCGCAAAAAGTATCCATTGTTGCCGCGCAATCTGTGCTTCAATTGTCTTAAGATGAACGATTCTAAGGCGTTGTTCATATCGCATCTAAAGAAGCGCAATTGCATCAATTTGTATCGTGTGCTCAACGCTCTTCGCATCAAGCAACCAAACTTTGCCTTTGCAGCCAGCGCAGAAGCAAGTGCCGTGACGACTTCATCTACAGTGGTGGAAACGCCACACGAAACATCAACGGATCGTCCAGAGAAGTTGCGTGCCAAGGAGCTGCTGGTCAATAAGCTGTACGAATGCAAGTTGTGCCCAAAAGGTTTTCGCACTAAGCACGAGTTTCGCACCCATGTGTACGATAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGCAGCTTCTGTGGCTTGGACTTTGCTGATCCAGTGGATCGACGTCGCCATTATAACAACATGGATTGCATTGTGAGATTGCGCTGCATGACCTGTGATGCAAAGTTGGAGACGCATCAGCGCTTCCTCGATCATGTCTATCAGGATCATTTGGGTGGTGTGAGCAGCGATAATGCCTCTACGGCGACAAGTGGCTTGGATCATTCGCCGCCGGGCAAGCGTAGTCTTTTGGGTGCTTTGGGCATTGGATCGAATGATGAATCgcgcagcagtagcagcaatcacaacaataacaacaaagacaacaatacaacagcagcagcaggaggtGTTGGAGCTGGATCACAATTAACCTTAACACCaaaagtagcagcagcaacaacaacagcagcagcaggtacTAGTGGCGGCTCCACATCGGGCGTACGCGATGCACCCAAATCGCAGTATTTTTCACGAATGCCACAGGTCTGTCCGATATGTGGCCAGCAGTACAACAACTATAATAATGTGCTGCGTCACATGGAATCGAAGCATCCCAACAAACTGCCAGAGACATATAAATGTGTGCGCTGTGGCCTGGGCTATCCACGCATCTCATATCTGCGCGAGCACATGATCAATGTACATGGCGTGGACAAGAATCGTCATTCTGGTGGATTTGAGTATATTGTGAATGCCGATGCAGTCAAATTGGCGGATGGCAGCACACCCAATGTCTACACGGGACGTTACGATTATGTGATGAAGGATTTAATTTCTATAAACAATGGTGGGACACTcgatgatgatgatgaggaaaGTGGTAGCGTTGCAAAAAAAACGCGTTTGGAtgatagcagcaacaacagcagcattgcCAACCAACAAAAGGAGTGCATCATCTGCAATGCTGTGTTTAGCAACAATATTGGTCTTTCGAATCACATGCGCTCGCATTATACGGCCTCAACAACGACAAGTGCAGCGTTAGCGGCGGCCAATCGCATGACGCCCAAATCATTGACAATAACGGCTACGCCACCGTTGGAAGCAGCTGCGGCAACAACGTGCACAGGCAGTGCATCGGCGGAAGCAGCGCTAGCGCCGGCGGTAAAATCATCAGCGACGCCTACAACAACACACGCATCGATGACTACAAAAAactcagcagcaacaacaacagttggaACAGGAGCAAGAACATCTAGTGTAAGTTTACCGCCAGCGATGGTCCATCAGACGGCACAGGAACAAGCTGTATTTCGACGTAGTTTGGATCAGGCAGCTGATCGACGATTCCGCCGCATGCGTTGTCGCATCTGCCAGCGACGATTTAGTTCAAAGAAATCGTACCGCTATCACATGCTAACCGATCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTATGTAATGCCGAGTTTGCCTACGAGAAGGGTCTGAAGGTGCACCTGTTCAAGGTGCACGGTCGAGCTATTAAGGATGAGATGATTGTCAAACAATTCGAATGCGATGTCTGCTCAACCGTCTACAGTTCCGAACTGGAATTGCAGCAGCACAAGCGTAGCGTCCACAAGTCAACCCATTCGGTTGCTAATGATTCAGCTACTGGCAAATCAACtttatcatcatcaacatcaaaaTCTGCTACGGCTACCTCAGCTGAACTTGCTGGCGACACATCTGACATTACGGTGGCATCAGCTCTGCCACTTTACTGGTACCAGTGCAAGTATTGTCCATCCAACTTTAACACCAACAAGAAACTGGCCATACACATTAATTCGCACGATGAGTTTGACTCGAATGATTATTCGTGCAAGGATTGTGGCAATGTTTACAGTGGCCGCAAGAGCCTCTggGTTCATCGCTATAAGAAGCATCCGCAGGTGCCGGATCCGGCCGAGTGTACTCTGTGCCGCAAGATGTTCTTTGGTCGTCAAATGCTGGAGAATCATACACCAACCTGCAATCGCAAGCCAATCACTTCCACTGGCGCCCATCAGCAGCAGGATCAACAGCAATTACAATTGCAACATCAACGTGTCATCTTTAAGCATAAGACGggcgatgatgatgacgatgacgacgatgatgatcagctactgctgctggacgatggtggtggtggtggaggCAGTGATAGCAAtggtgcagcagcagccgttgcCACAATAAAAACGAGTACAATGAAGATACGCATTCCCGAGGTGGCATGCACCATTTGTGGTGCACGATTCACCGATCAAGAAATGTTCAGCAAACACATTGAGAAGCACGAACAAGAGCTCTATGTGGACAATCCTTTGGCTGCCATGTTCGATGATGGCCCAGCAGATGCTGGACAATTTCAAGTTGAGCGTCAAAATGAGAATGGCGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCACAGGTGATAGCGCTCAAGGTTCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCAACCATCGAAGGCGAAGCGACAACattgaacagcagcagcagcaacaacaacaattcgcTGAGTTCATCATCGATGCTGCATCTGCGCGAATTGCATGCGGTGGGCCTGATGCCCaatcagcaacagcaccaaaaacagcaacaaaaccagCAGCAtcttcaacaacagcaacgaacgAGCAAATCCATGAAACGAAAACGTGAATTAAAATGCGAATATTGCGCCTCCACATtcattagcaacaacaatctgCGTCGCCACATGTATGAGCTGCATAAACATGAGGTCAGCAATCTGCCTGAGCCGCCCGTTATTGTGGTGGATGAGCCATTAACGTGCCGCCGTTGCGGTGATTTACAGTTTGACACCAAAGATATATGGATCGAACATAAAATGGCCGATGCAAAAGTTGTGCGTCCATTTTGTCCGTTCCAATGGGGCTGTGATTTGTGCGGCGAGTATTTGTCGCGCAAGGAAAAGCTGCTCAATCACATTCACAATCATCTCAAAGAGGATGTGATTGTGCCGGTTGCGACTGCTAAGCCAGTagtaacagcagcagaaacaacagcagcagaaacaacagcagcagaaacaccatcaacagcaacaacaacagccggaacagaagcaacagcaacagtaaaggcaaaatcaacagcagcagcgacaaaaGTTCATAAATCTATTAAACAGCAGCGGCATCAGGCAgtgacagagacagagacccAGGAGGCTTATAATGATGTGAAGGTAGCGAAGAAGCATGACAGTGATCTGGATGATGATGAGAGCGATAATGGCGGCGATGATGATGAAGGGGATAGCACCagtgctgatgatgatgatacaGATAAAGAcgaggatgatgatgaagaagtcgacgacgacgatgacgacgatgttgatgttggtgatgacgatgatgatgatgatgatgatgatgatgatgatgatgacgatgatgatgatgatgatgatgatgatgatgatgacgatgacgaagAAGATGATGGTGAAAATGTTGTGTcccagcaaatgcaaatgcaacagctacaaaatgcaagcagcaacaataaaaacaacacaaatagtACTATTATTGATAATGATGACGATGACCTCATTGAGGAGGTAATCGAGGAAGATGGCATTGTTGTCGAGCAGCTAGACAATGGTGAGGACGATGAAAACATCgatgaggatgatgatgataatggtAACTCAATGGATAAGCAAGAACAGACAAGACGCCTCAATTTTAGCTATtcgcgcaacaacaacaacacccaGCTAAATGGCGATGGTAAAAGAAACGATGGTAAACAGGCAACAGTGGCAAGTCCAGTGCATCATGATGGGGGTGAGGAGGTGGATGACTTGGATACAGATGATGATAATGCTGTGGGTGAAGAGATGACCATCGATGATATTATTGAAGAAGATGATGGCGtggatgatgacgatgatgatgtcGTCGGTGCCGGTGGAGGTGTTGTTGAGGATGACGACGAAGACAACGTTGGCGATGATGATGTTTGTGAGGACATCATGGATGAGGATGATGGCCAAGTCGTTGGCAATGGTGTAGATCGTggtgctgatgctgatgatacaacatcaacatctGAAAGCgaatcgacaacaacaacaatatcgcATTCAACAACTGGTGAACGGCGTAATGCTTCAAAAcgaaataagaaaacaaaagttgcATCAGCGCCATCTGCCGCTGATCACACTAATTCCATCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCAACTACAGACACATATTAAAAGTCACTTTCTTAATGGACCATCATCGGCGGCAagtagcagtagcaacaatagcaatagcagTAGCAATAGCTATAGCAATAGAAATAGCAtctataacaaaaacaataacaacaaaggtaacagtaacagcaacaaaaccaaagccaaaaagTTTAGCTTGGAAGCAacgaagacaacaacaacaaaaacaactacgACATTAGCAACGAATGCTGCAGCTGGCTCAAACTGA
Protein Sequence
MLSSQRTCDMHLDFTTITSVDRLSLHICHACISYLNSWQSFKNRCLSSQSKQLQWLENDKTKQQTLLGYLDLNRAENGSGAIQQQQQQQQHELKIDAATSAAEMTSTAANILDGIPLLKKRKSLTVYVSPKQQLLQHQQQQSQQLHQQEQSLLLTQHQLQQQQSQQQRATTTKAAAAGRATSATAATATESHQTLQTLLLQVPTATTQQQQQRKYQHQQQLHQQQRGKQQHHHHHQQHYHHHQEQQQRRSPVRQPRRQQQQQKQHASTAPVQRLSDKLKPKLYLPLNITVPPILPPPMLQSATLSNAADAAALLPLQLSLPLDFSQTLNPQLNSNHSQRQAPPPPLPRVAATMTSNTAASALATATFGSDSGGAVSTPLLMPVTLQSAAQQLRFFRRHSYNNPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLNTADYDYTAQHCVTAVAAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEHYQQLLSRDKVDFIHENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRIKQPNFAFAASAEASAVTTSSTVVETPHETSTDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTATSGLDHSPPGKRSLLGALGIGSNDESRSSSSNHNNNNKDNNTTAAAGGVGAGSQLTLTPKVAAATTTAAAGTSGGSTSGVRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLISINNGGTLDDDDEESGSVAKKTRLDDSSNNSSIANQQKECIICNAVFSNNIGLSNHMRSHYTASTTTSAALAAANRMTPKSLTITATPPLEAAAATTCTGSASAEAALAPAVKSSATPTTTHASMTTKNSAATTTVGTGARTSSVSLPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSTVYSSELELQQHKRSVHKSTHSVANDSATGKSTLSSSTSKSATATSAELAGDTSDITVASALPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFGRQMLENHTPTCNRKPITSTGAHQQQDQQQLQLQHQRVIFKHKTGDDDDDDDDDDQLLLLDDGGGGGGSDSNGAAAAVATIKTSTMKIRIPEVACTICGARFTDQEMFSKHIEKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPTIEGEATTLNSSSSNNNNSLSSSSMLHLRELHAVGLMPNQQQHQKQQQNQQHLQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDEPLTCRRCGDLQFDTKDIWIEHKMADAKVVRPFCPFQWGCDLCGEYLSRKEKLLNHIHNHLKEDVIVPVATAKPVVTAAETTAAETTAAETPSTATTTAGTEATATVKAKSTAAATKVHKSIKQQRHQAVTETETQEAYNDVKVAKKHDSDLDDDESDNGGDDDEGDSTSADDDDTDKDEDDDEEVDDDDDDDVDVGDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDGENVVSQQMQMQQLQNASSNNKNNTNSTIIDNDDDDLIEEVIEEDGIVVEQLDNGEDDENIDEDDDDNGNSMDKQEQTRRLNFSYSRNNNNTQLNGDGKRNDGKQATVASPVHHDGGEEVDDLDTDDDNAVGEEMTIDDIIEEDDGVDDDDDDVVGAGGGVVEDDDEDNVGDDDVCEDIMDEDDGQVVGNGVDRGADADDTTSTSESESTTTTISHSTTGERRNASKRNKKTKVASAPSAADHTNSIYTCDLCQLCFDSQEQLQTHIKSHFLNGPSSAASSSSNNSNSSSNSYSNRNSIYNKNNNNKGNSNSNKTKAKKFSLEATKTTTTKTTTTLATNAAAGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-