Basic Information

Insect: Scaptomyza polygonia
Gene Symbol: ct
Assembly: GCA_035044585.1
Location: JAWNNU010001642.1:1462884-1506678[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 6.8e-27 9.3e-23 80.6 0.0 3 72 1187 1257 1185 1262 0.95

2 3 7.2e-32 9.8e-28 96.6 0.0 3 77 1684 1759 1682 1761 0.96

3 3 4.4e-31 6e-27 94.1 0.0 3 76 1965 2039 1963 2042 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	6.8e-27	9.3e-23	80.6	3	72	1187	1257	1185	1262	0.95
2	3	7.2e-32	9.8e-28	96.6	3	77	1684	1759	1682	1761	0.96
3	3	4.4e-31	6e-27	94.1	3	76	1965	2039	1963	2042	0.96

Sequence Information

Coding Sequence: ATGTCGGCCGATATTTACAGCTGGCTCGTGcgCGCAACACTCGCCGAGAAGGAAGTGAACACACTTAAGGAGCAACTATCCACAGGCACGCCcggcagcaacagcgacaacaacagcaacaacagcgacaacatcagcagcagcaacacagcagcaacaacagcagcagcagcggcggtagcagcagcagcagcatttgccAGCGGCGAAGAGGAGGCCACTGGAAACAGTGAAAGTGAGAGCGACAAGCTGTTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAGCgctgagcagcagcaacagttgcagaaCAGCCTGCAGAACGGCGTCGGCGGCGCCTGTTTAAATCCAAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGAAGCAGCAGCGGCTgctgcggcggcggcagcagcacaacagcaacagcaacagcaacaatcgcCAATGCATTCGCCCATTGCTgccatcaacagcagcaacaacgcaCAAGCAACAGccggagcaacaacaacaaatgcaacaacaacaacagttggaGCAACACAACAGCAATCGACACATGCTGTTGCTGAGACAACAGCAACtagcaattgcaacaacaacaacgcagaGGACGATGATGAGGACGACGATGAGGAGGAGGATGCATCGATGCAATCAAATGTGGCACATGCCGATGGTGATCTAGACGATGATGaggatgacgatgatgatatGGAGTTGGAGCCGGAGCATGTTGCTGACGTTGGCGCTAGTGTTGCTGCCGTTAAGGCAACattggcaacaacaagaactgaTAGCGATGCGAATGCAACGCATAATAATGTTAATGATGTTGATTATGATGCTGACGATGCTGATGATCAtcatgatgttgatgatgatgatgaggatgtTGCCGTTGTGGCTAACGTTGTGCATGAGGATGGCGATGAAGCTAGTTTAAATGTTAGTAGCAATaatcacagcaacaacaacaacaacaacaacaatagctgtAGTCGAAattcgaacaacaacaacaacaataacaacagcaacagtgaAACGCAACATGTTGCGCTGcgtgataataataatgaaaatgagCAACATGTTGCACATAGCGCTGAGGACGATGATTGCACCAATAACAATActaacaccaacaacaacaacaacaacagcaacagcagcagcaacaatgagAAACGCAAAAAGCGCaacgccagcaacaacaacaacaataacaacaacaacaacaatcattcTGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCATCGCCTGCGCGCTCTGGAACAAACTCATCTCGTACAAATCCAGAGACTCGAAGAGCATTTGGAGGTTAAGCGGCAGCATATTATGCGTTTGGAGGCACGTTTGGATAAGCAACAGATTAATGAGGCGCTGGCTGAGGCAACTGCATTGGCTGCCGCTGTTAATGCTGCTGCAACAAccatcaataacaacaacagcaacagcaacaacaacaataacaacaacaacagcaataacaacaacaatcacagcAGCCAGAGcagtgacaacaacaatgagctGAACGCAGTTtttaaaacaacagcaacagatcTGACATCAACCCAACAGCACAACGACGATGATGAGGATGACGATGATAATGATCAAGATCATGATCATGATGCCGAATTGcgtgatgctgatgctgatgccaatgccaatgatgatgatgatgatgatgatgaagtaGAGGGCATGGATATGGCCaacgagcagcagcaacagcagcaacagcaacatgcagccattaccaacaacaatcgtcatgatgatgatgatgataataataaaaatgatgaTGAGCAGGATGCTGATATGTCCAATGCCACAGGCACAGCCACAGCGGACAATGCCGGCAATGagctaaaaatcaaaaaggaaCAGCACAGTCCATTGGATCTGAATGTGCTTAGTCCACATTCGGCTattgccacagcagcagcagccgcagcagcagcagccgcctgCGCCAACAATCCCAATAAATTCCAAGCTTTGCTTTTGGAACGCACCAAAGCCGCTTTGGCCGCCGAGGCGCTCAAAAATGGCGCCAGCGATCCAACGAATAATGCCAGCAGCGATGAAatgccgcaacaacaacaagcagcagcagaggcagcagcagcaccagttAAAGACGATCAAGCACAAGAACAACATGAAGAAAAACATGAtcaagcagaagaagaagaagaagcggTCACAACTACAACGCCATCTACAGCCAATCAGCCAGAAACAAGCGCAAACGTTCGCGAAACGAATGCAACTGAAACATTGCAGCccaaaattgaaataattgaaACAGAAGACGATGCTGAAATTGCTGCTGGCCAAACACTGGAAGAGCAGCTGGTCAATAGCTATTGGCGGCGTGGCTTTGAAACAGCCACAACAGCAGTAACAACAGcacctacaacaacagcagcaacagcagcaactggaAGCAAAACGCCAACAATTTATCAAAATGCCAATGCggtgcagcagcaattgttgctgccaccaccgccgccgccgcagcagcaacaacacttttctgcccagcaacaacaacaacaatatcatcaacaacaacaacaacaacaacagcaacagcaacatggaCCTTCGTCCACAGTGCTGCTAAGTCAATTGGTTAACTCAACTTTCTTACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCACACGCCTAGATGCCGCAAACCAGCACCAGctccaacaccaacaccagcagcagcagcagcaccaacaccagcagcaacagcaacagcaacaacaacagatgcatcagccacagcagcaacatcaccataacagcagcaacagcagcagcaacagcaacagcagcgttACCGCCAACGATCAACTGAATCCGCATCTGCATCATGCGCATCATCACGGGCATGCACATGGACAATTGTTGCATGCAGCGCATCATATGCATCATGGCGCCGATTCCAATTCAAATAGCGCCACAAGTACACCCAACAGCAGCACCGCACAGCTAGCAGCAAGCATTGCCAGCACACTGAATGGCAACAAGTCGCTGTTGCAACAGGCAGCAGCCGCTGCCAATGTcgaggacaacaacaacagtttgaCACCAAATGCAAATGCTGCGGTCGCCGCTGCAGCGATGGCCGCCAATGCACAGCATGCGGCCGCCTTTTTGCCCAATCTACCAAATCTGCCCAATTTTCCGAATCTGCCAGCGTTTCAGTTTGCGGCCGCAGCTGCCGCTGGCCAGGAAGCGCGCGCCCATTTTCGATTTGCGGACGCTGAATTGCAATTGCAGCCGGGCGTTTCGATGGCCGGCCGTTTGGGTGAATCGCTGATACCCAAAGGCGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAACATGGACAAGTATTCGAATCAGGCGCTCGACACTCTGCATATTTCGCGACGTGTTCGCGAGCTGCTGTCGGTGCATAATATTGGCCAGCGTttgtttgccaaatatattttGGGCTTGTCGCAGGGCACCGTTTCGGAGCTGTTGAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGCGATAGCTATCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCTGTCATGCTCCTCAAATCGCTTATACCCAAAAAAGACTCAGGACTGCCACAGTATGCTGGACGCGGTGGTGGCGATGATTCCATGTCGGACGATCGCCTTGCACACATTCTCAGCGAGGCCTCCTCCCTAATGAAGAGCAGCGCAGTCGCCGCACAGCATCAGCAGGAGCATCAGCGTCGCCATATGGGCGACGATACGCACAGCAATGAGGATAGCAAGTCGCCGCCGCAAAGCTGCAGCTCCCCCTTCTACAAGGTAGAACAGCAGATTAAGCATttgcagcagccgcagcaacagcaacagctgcaacatGTCTCGGAGCATGCGCAACGCGAGCAGCGTGAAGCAgccgccgctgccgccgccgttgccgtacatcagcaacagcagcaacgggAGCAACGGGAGCAACGGGAGCAGCGGGAACAGCGTGAACAGCGAGAAGCAGCCCAGCgggagcaacagcaacggatACGTCACGAGGATCTGGCACAGGACAAAATGGCGCGTCTCTATCAGGAGCTAATGACACGTACACCCCGTGAGGCAGCATTTCCAGGGTTTTTGTTGTCACCGTTCTTTGGCGGCGCAGCTGGCATGCCGGGAGCAGCCGCTAATCCATTCCCCGCAGCAATGGCCGCTGATGAGAATATGCGTCATGCCCTGGAGCGTGAAATAGCcaagctgcaacagcagcaacaggccCAGCAGGCGCAACAGGCAGCGGGCTTTCCCAACTTTTCCAGTTTGATGGCACTGCAACAGCAGGTGCTTAACGGTGCACAGGATTTATCGCTGGCCAGCAAAGATATCAAGCTGAATGGCCAACGTTCGTCGCTCAACGATCAGcacagcggcggcagcagcagctgctccaAGGACGGCGAACGTGGCGACGACAACGATCGCAGCAGCCAGTATCCAGTACTGCCGCATGCCCGCAAATCGGAGGGCGGCAACACACCGGCACCGCCAGCACCACCAGCATTAGCCGCTGCCGGCGGCAATAGCAATTCGAGTGCTGCTGGCATCAGCGTTGCCACCGGCGGTCATGGCAGCAACTCGGCAGCACCCAGTCCACTTAGCAACTCGATACTGCCACCGGCATTGAGCAATCAGGGTGAGGAGTTTGCGGCAACGGCGAGTCCGCTGCAGCGCATGGCATCGATAACCAATTCGTTGATAACGCAGCCACCAGTGACGCCGCACCACTCACAGCCACAGCGGCCGACAAAAGCGGTGTTGCCACCGATAACACAGCAGCAGTTCGATATGTTCAACAATCTCAACACCGAGGATATTGTGCGGCGAGTGAAGGAGGCGCTCTCTCAGTACAGCATCTCGCAGCGTTTGTTTGGTGAGTCAGTTCTGGGTTTGTCGCAGGGTTCGGTGTCGGATCTGTTGGCGCGACCCAAGCCCTGGCACATGCTTACGCAGAAGGGACGCGAACCGTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCTGTGCATAAGCTGGTCGCCAGCCAATATAAGATTGCGCCCGAGAAACTGATGCGCACGGGCAGCTACAGCGGCAGTCCGCAGATGCCGCAGGGCTTGGCCAGCAAAATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGAACTTAAGCTGCAGGAGCCAGCGCAGGCCCAGCATATAATGCAACAGATGCAAGCAGCCGCTGCCATGTCGGCagcaatgcaacaacaacagcaggcaGCTGCCGCACAAGCAGCTGCGGTTCAACAGGCCCAGGCCCAGGCTCAGGCCCAAGCCAATCAGCATCAGCAGGcccaacagcatcagcaggcTCAGGCTCAGGCCCAGGCTCAGGCCCAGGCCCAAGCTCAGGCCCAGGCCCAGTTGTTGCATCATCAGAATATGCTGCTGACATCGCCAGGTTTGCCGCCCCAACATGCCATTAGTTTGCCGGCAGCGGTGACGCCCAGTGGCATACaaagtgttgctgttggtgctaGCAGCACGCCCCTCAGCAACGAAAAGAAGCCGATGATGATGCCAGTGTTGGGTGGGGCACATGCACCAAATGCAATGCGCAGCCTGCATCAGCATATGTCGCCGACAGTTTATGAGATGGCCGCATTGACCCAAGATCTGGACACGCATGATATAACAACGAAAATCAAGGAGGCTCTGCTCGCCAACAATATTGGCCAGAAAATCTTTGGCGAGGCAGTGCTGGGCTTGTCGCAGGGCTCCGTGTCGGAGCTGCTTAGCAAACCGAAGCCCTGGCACATGCTCTCGATCAAGGGTCGTGAGCCGTTCATACGCATGCAGCTGTGGCTCAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGGCGTCGCAGCACTGGGCCCAATCAGCAGGACAACAGCAGTGATACGTCCAGCAATGATACAAATGATTTCTATACGAGCAGCCCCGGACCGGGTTCGGTGGGCTCGTCGGTGGGTGGTGCACCGCCCAGCAAGAAGCAGCGCGTCCTCTTCTCCGAGGAGCAGAAGGAGGCATTGCGTTTGGCCTTTGCACTCGATCCATATCCGAATGTTGGCACCATTGAGTTTCTGGCCAATGAACTGAGTTTGGCGACGCGAACCATCACCAACTGGTTCCACAATCATCGCATGCGACTCAAGCAGCAGGTGCCACACGGTCAGCCCGGCCACGACAATCCCATACCAAGTCGCGAGAACACAAACGCCACGCCCTTCGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGGATGGGTTTGAGTGGTGCGCCCATACCTTACCCACCGTATTTTGCAGCGGCAGCTTTACTCGGACGCAGCCTGGCTGGTATACCGGGTGCGGCAGCGGCGGCTGGTGCAGCGGCTGCGGCAGCGGCTGCAGTTGGCGCTGCCGGAGGCGATGAGCTTCAGGCATTGAATCAGGCGTTCAAGGAGCAGATGAGTGGCTTGGATTTGTCGATGACAACGCTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTAGACGCCAGCGGGCACAATATGAGCGACAACGAATCCCTCGAAGGTGGCGCCCACGAGCCGGAGCACACGCCCCTTTCCGATTATGAGAAGGCGCTGCAGAATTCGGCACTTGCCTCGGCGGCCGCAGCTGCGGCGTATATGAGCAATGCGGCGCGCAGTTCACGACGCAAGCCGGCGGCACCACAATGGGTTAATCCGGCCGGTGCCACAATACCAATaccggcagcggcagcagcagctgctggcgTCATTGCCAATAACAACGTCGTTGACAGCACGAGCAGCGGCAGTGAGCGAATTATCAATGGCGTCTGTGTCATGCAAGGCTCCGACTATAATCGTGAAGGTGAGGGCGATGAGGGTGGTGGTGTCAAGGGTGATGCATCTGCCGATGCTGCTGATGCAGAGCACGAGGATCATGCTCAACTGGACGAGATTGAGCAGCGTTTAATGGAACCGGAGGTGCGCATCAAGCAGGAAGACGATGACGAGGAGGTGGAACaaacgcaacagcagcaggagctGCTGGATGATGGCGTGCCACTGGACAGCGATGCGGAAAAGCAGCTCAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGTGTGCGACGGCTCAGTAGCAATGGCGATGCCGATGAAGCGagggcagcggcagcagcagcagcagcagcggccgCTGTAGCAGCTGTTGCGGCCGCGacgcaggcagcagcagcagcgtggAACTACTAA
Protein Sequence: MSADIYSWLVRATLAEKEVNTLKEQLSTGTPGSNSDNNSNNSDNISSSNTAATTAAAAAVAAAAAFASGEEEATGNSESESDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQNSLQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAQQQQQQQQSPMHSPIAAINSSNNAQATAGATTTNATTTTVGATQQQSTHAVAETTATSNCNNNNAEDDDEDDDEEEDASMQSNVAHADGDLDDDEDDDDDMELEPEHVADVGASVAAVKATLATTRTDSDANATHNNVNDVDYDADDADDHHDVDDDDEDVAVVANVVHEDGDEASLNVSSNNHSNNNNNNNNSCSRNSNNNNNNNNSNSETQHVALRDNNNENEQHVAHSAEDDDCTNNNTNTNNNNNNSNSSSNNEKRKKRNASNNNNNNNNNNNHSAVLLAAKDKEIKALLDELHRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATTINNNNSNSNNNNNNNNSNNNNNHSSQSSDNNNELNAVFKTTATDLTSTQQHNDDDEDDDDNDQDHDHDAELRDADADANANDDDDDDDEVEGMDMANEQQQQQQQQHAAITNNNRHDDDDDNNKNDDEQDADMSNATGTATADNAGNELKIKKEQHSPLDLNVLSPHSAIATAAAAAAAAAACANNPNKFQALLLERTKAALAAEALKNGASDPTNNASSDEMPQQQQAAAEAAAAPVKDDQAQEQHEEKHDQAEEEEEAVTTTTPSTANQPETSANVRETNATETLQPKIEIIETEDDAEIAAGQTLEEQLVNSYWRRGFETATTAVTTAPTTTAATAATGSKTPTIYQNANAVQQQLLLPPPPPPQQQQHFSAQQQQQQYHQQQQQQQQQQQHGPSSTVLLSQLVNSTFLHANHSSCSNSKSTRLDAANQHQLQHQHQQQQQHQHQQQQQQQQQQMHQPQQQHHHNSSNSSSNSNSSVTANDQLNPHLHHAHHHGHAHGQLLHAAHHMHHGADSNSNSATSTPNSSTAQLAASIASTLNGNKSLLQQAAAAANVEDNNNSLTPNANAAVAAAAMAANAQHAAAFLPNLPNLPNFPNLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYSNQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGGGDDSMSDDRLAHILSEASSLMKSSAVAAQHQQEHQRRHMGDDTHSNEDSKSPPQSCSSPFYKVEQQIKHLQQPQQQQQLQHVSEHAQREQREAAAAAAAVAVHQQQQQREQREQREQREQREQREAAQREQQQRIRHEDLAQDKMARLYQELMTRTPREAAFPGFLLSPFFGGAAGMPGAAANPFPAAMAADENMRHALEREIAKLQQQQQAQQAQQAAGFPNFSSLMALQQQVLNGAQDLSLASKDIKLNGQRSSLNDQHSGGSSSCSKDGERGDDNDRSSQYPVLPHARKSEGGNTPAPPAPPALAAAGGNSNSSAAGISVATGGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLASKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQANQHQQAQQHQQAQAQAQAQAQAQAQAQAQLLHHQNMLLTSPGLPPQHAISLPAAVTPSGIQSVAVGASSTPLSNEKKPMMMPVLGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGHDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMTTLKRERSDDYQDELELDASGHNMSDNESLEGGAHEPEHTPLSDYEKALQNSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGATIPIPAAAAAAAGVIANNNVVDSTSSGSERIINGVCVMQGSDYNREGEGDEGGGVKGDASADAADAEHEDHAQLDEIEQRLMEPEVRIKQEDDDEEVEQTQQQQELLDDGVPLDSDAEKQLKVINEEKLRLVRVRRLSSNGDADEARAAAAAAAAAAAVAAVAAATQAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00495757;
90% Identity: iTF_01326294;
80% Identity: iTF_01326294;