Spol011556.1
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- kn
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010001457.1:233664-236239[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-119 1.5e-115 387.3 0.0 205 384 1 209 1 213 0.99 2 2 2.6e-06 0.014 14.3 17.5 424 523 216 314 209 337 0.58
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTCGTCATATCCACCCAAGTGGCCGTTGATGGACCACTTTTGGCTATCTCGGATAATATGTTTGTGCATAATAATTCGAAGCATGGAAGGCGCGCCAAACGTTTGGACACAACGGAAGGTACAGGCAATACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCTGTGGCGACACCCTGTATCAAAGCGATATCACCAAGCGAAGGCTGGACAACAGGTGGCGCCACCGTCATAATAGTCGGTGATAATTTCTTTGATGGCTTGCAAGTGGTATTCGGGACGATGCTGGTGTGGAGCGAGCTAATAACATCGCATGCGATAAGGGTCCAAACACCGCCGAGACATATACCGGGTGTCGTTGAGGTGACGCTCTCCTACAAGAGCAAACAATTCTGCAAAGGATCACCCGGTCGATTTGTCTATGTTTcAGCACTCAATGAACCCACAATCGACTATGGCTTCCAGCGGCTGCAGAAGCTAATACCACGACATCCCGGTGATCCCGAAAAACTGCAAAAGGAGATTATACTGAAACGTGCAGCGGATCTTGTTGAGGCACTCTACTCCATGCCCAGCAGATCACCGGGCGGCTCGACCAGCTTCAATTCCTATACGGGTCAATTGGCGGTGAGTGTACAAGATGGTTCGGGCCAATGGACCGAGGACGATTATCAGCGTGCCCAGTCGAGCAGTGTTAGTCCACGTGGCGGCTATTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGCGGTTCGTATGGGGCAACGGCAACTTCAGCGAGCGTTGCAGCCACCTCGAATGGCTATGCGCCTGCACCGAATATGGGCACACTATCCTCATCGCCGGGCAGCGTCTTTAACTCATCGTCAATGTCCGTGTCGACGCCGTGGCATTCGGCGCTGGTGCAGCATCATCATGTGACCGCCACGACAGCCGCCACcagccatcatcatcatcatccgcATCATCATTATCCGCATCCGCATCAGCCCTGGCACAATCCGGccgtagcagcagcaacagcggcgGCAGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYTGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATSASVAATSNGYAPAPNMGTLSSSPGSVFNSSSMSVSTPWHSALVQHHHVTATTAATSHHHHHPHHHYPHPHQPWHNPAVAAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_01549315;
- 80% Identity
- -