Basic Information

Gene Symbol
Kdm5
Assembly
GCA_035044585.1
Location
JAWNNU010001657.1:370799-376883[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-26 5.2e-23 81.8 0.1 2 89 233 316 232 316 0.95

Sequence Information

Coding Sequence
ATGTCTGCCAAAACAGAAGCGGATAATCCAGCCGCCAGCGCCACAGCGAGTGGCGGCGGCTTGAATAGCTCGTCCAATGGTACTATAACACCAGCCAGACGACTGCGCACACGAAACTCAACCGGCAGTGGCAGCGAGTCTGCCAAAAAGAATACCAgccacaataataataataacaacaataataacgaaTCAGTTTTAACGGGCAATGATGCAAcaggatcatcatcatcaacaacgcCTGCATCAggtggtggtgctggtggTTCACTGTCATCAGCAAATCCAACACCCAGCTCTGTGGAACGTTCCATGCCCAGTGTGCCGATGAACCATGCCAGCAGCAGTGTCTCAGCCAGCCGAAAATATCACAACAGCTGTCCGCATCCAATACCGACGGTGCACAAGAAAACGCTGCACACGAAGCCGCACAGCACCAATAAATTCGATGAGGGCAAAAATGAAGAATTCCATTTTGATACGCCGCCCGAGTGTCCAGTGTTTAGACCCACAGTAGAAGAGTTTAAAAATCCATTGGCCTACATCAGCAAGATTCGCTCCATAGCAGAGAAATGTGGCATTGCCAAGATATTACCGCCGGAAAAATGGGCTCCACCATTTGCCGTCGATTTGGACAAACTGCGTTTTGTGCCGCGCGTGCAACGCCTCAACGAACTAGAGGCCAAGACGCGagtcaaattaaatttccTAGATCAAATTGCCAAGTTCTGGGAACTGCAGGGCTCATCACTCAAAATACCGATGGTAGAGCGCAAAGCTCTAGATCTGTACACACTGCATCGTGTCGTTCAAGAGGAGGGTGGCATGGAGCAAACAACCAAGGAGCGTAAATGGGCCAAAGTTGCCAATCGCATGCAATATCCATCCAGCAAAAGTGTTGGCGCCACACTCAAAGCCCACTACGAGCGCATCCTGCATCCCTTTGAGGTGTACACCTCTGGCAAAGTGTTGGGAACAGGTGCTACTGCTGGTGGCGTATCGTCAACAGGTGCAACGCCCGTTAAGCTCGAAGATGTCGGCACCGATTACAAGGCCCACGAAATACCTACACGTCAGCAAATAGCGCCACCAAATGAGAACAACACGCGACGCTCGAAACGCTTTGGCAACTCGAATGCCGGCTGCGGCTTAAACATGGCCAAGCCAGGATGTGCTGCATCtaatgctgttgctgcagtagcagctgctgctgctgctgcttgtgcaATTAAAACGGAGACCAAGGAGGATTTCAAACGTGACCTCTTAAGTAGCTTCAATGCGGTCAATATTGCAGGCGGAGGaggtggtgctgctgctgctgctaattcTACTaccggtggtggtggtggtgggggTGCACCTGCACCTGCACCGAATACACGCGCCACCCATAAGAAGGCCACAACAGAGCAGTCACAGCAACCGCTTATCGATCCACTAATGAAATACATATGCCACATCTGCAATCGCGGCGATGTCGAAGAGTCCATGCTGCTGTGTGATGGCTGCGATGATAGCTATCATACCTTCTGTCTATTGCCACCGCTAAGCAGCATACCCAAAGGAGAATGGCTTTGCCCGCGTTGCGTTGTGGAGGAGGTTAGCAAGCCACAGGAAGCATTTGGCTTCGAGCAGGCCGAGCGTGAGTACACATTGGGCCAGTTTGGTGAAATGGCCGAGCAGTTCAAGCAGGAATACTTTCGGAAGCCGGCACACTTGGTCACCACAGAGATGGTGGAGCGTGAATTTTGGCGTATTGTGTCCTCGATTGATGAAGATGTCACTGTCGAATATGGCGCTGATTTGCATACCATGGATCATGGTTCTGGGTTTCCTACAAAAAGCTCGCATTACTTGTTGCCGGGAGATCAGGAGTATGCCGAGTCAAATTGGAATTTAAATAATCTGCCGCTGCTCGAGGACTCGATACTGGGACACATTAATGCTGATATAAGCGGCATGAATGCACCATGGATGTATGTGGGCATGTGCTTTGCTGCCTTCTGCTGGCACAACGAGGATCACTGGAgttattcaattaactatttgcATTGGGGCGAGGCAAAGACCTGGTATGGTGTACCCGGCTCCCGTGCCGAACAATTCGAGCAGACAATGAAGCGTGCCGCACCCGAACTCTTCTCCTCGCAGCCAGATTTGCTGCATCAGCTGGTCACGATTATGAACCCGAATATTTTGATGAACAATGGCGTGCCCGTTTATCGCACCGATCAGCATGCCGGCGAGTTTGTCATCACATTTCCGCGTGCCTATCACGCCGGCTTTAACCAGGGCTACAATTTTGCCGAAGCTGTTAATTTTGCACCAGCCGATTGGCTCAAGATGGGACGCGAATGCGTCAATCATTATTCAATGCTGCGTCGCTTCTGTGTTTTCTCGCACGACGAACTCGTTTGCAAAATGGCCTTGGAGCCGGCCAAGCTGACATTTGGTATTGCCACCGCTTGTTATATAGACATGGCCGAAATGGTCGACACCGAAAAGAAACTACGCAAATCTTTGCTAGAATGGGGCGTCACACGTGCCGAGCGTCGCGCCTTTGAGCTGGTCAACGATGATGAGCGCCATTGCCAGGAGTGCAACACCACCTGCTTCCTGTCGGCCGTTGCCTGTGAGTGCAACGATAGGCTGATTGTCTGTCTGCGTCACTACACTGTACTCTGCGGCTGTGCACCAGAGAAACATACGCTCATCTATCGCTATACCCTGGATGAGATGCCGCTCATGCTGCAAAAGTTAAAGGTCAAGGCGCACAGCTTTGAACGTTGGCTATCACGTTGTCGCGACATTGTCGATGCAAATACGCCCACATCGGTGACGCTTGCCGAGCTGCAGGAATTGTGCAAGGAGGCCGAAACTAAAAAGTTTCCATCATCGCTGCTCATCGATCGTCTAAATGCGGCGGCCATTGAGGCCGAGAAATGTGTCACTGTCATCCAACAGCTAGGCATTAATAAGGTACGCACTCGCTCCGATCACAATCAGGAGGCAGCACAATACAAGCTGACCATGGAGGAACTTGAGTTGTTTGTACAGGAAATTGATAATTTGTGTTGCATTATTGATGAGGGCGCTTCGGTGCGTGAGCTACTGGTGTTGGGCAAACAGTTTGTGGATCGAGCCAAGGCGCATTTGCAACAGTCGCTGGAAGTGCTCGAGGAGAATGAACTGGAGACACTTATCAATGAGGGCAGCTCGTTGCGCATTGAACTGCAGCAGCTGGATCAGCTGCAGAAGCGTCTCAAGCAATGCAAATGGTATAAACGCTCGCAGGGTTTACGCGAGACAAGCTCTAAGTTGACCTACAAGGACGTGGAAACGCTGCTGCATACCGCTGCCGCTGAACTGGATCCCACCGATCCCTATGTGGATCGCGAGATGCGCAAACTGCAAACAATTGGTGCTGCAATCGAGGCATGGGAATTGCAAGCAGCCAAATATTTCCGACGTCTCAATCAGCAGCATGAGCTAGCCGAGATTGAGCAGTTTCTTAAGTCTGCTAGCGAAATAAATGGGCAGGTGCCGTCGCATGGCATGTTAAAGGATGCGCTGCGCAAGGCACGTGAATGGCTGCGCGCCGTcgagcaactgcagcaaaacAATCATGTTACCTATTGCCACACGCTGGAGGCAATGATTGAGCGGGGTCTGAGTATACCCATACAGCTGGAAGAGTTGGGCCGCATGCAAGGACATTTGAATAGTGCCCATCAATGGAAGGAGAATACGGCGCAAGCGTTTCTCAAGAAGGGCACATTCTATACGCTGCTGGAGGTGTTGATGCCACGTGCAGATGCCATTAATATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTCAAGGACAAGAATCCCGCCGAAATTGTAGCCAGCTTCAAGCAAGCCGAGGAGCAGGAGCTGCGCGATATGCGCGATCTTCGTCGCCAGAATATGACCAAGAATTCATTGCGCGATGTCTTTTGCCTGTGTAAATCAGAATTCCGTGGCCTGATGTACAATTGTCAGCTGTGCCGCGATTGGTTTCATGAGGATTGCGTCCCATCGCCGCCCACAATGCATCCATTGGCTGCGCAACAGAACGGAAATGGTGGTGGTGCAATTAATGGTGAAACATCCGCTGCGACGCAAGCAAAATGGCTATGTCCGAGCTGTGTGCGTTCGAAGCGTCCACGTTTAGAGACAATTTTACCGCTGCTCGTTCAGTTACAACAGCTGCCCATTCGCCTGCCTGAGGATGAGGCATTGCGCTGTTTGGCAGAGCGTGCCATGAACTGGCAGGATCGTGCACGCAAAGCTCTAAGCAGTCCCGACGTCAGCGCCGCCCTTGATGCCATCTTGTTGCAACAGCAGAAGCGACGCACGGAAAGTGGCAGCGGTGGCATGGCAGTCCTGGGCAACATCAACAGTCCACGTAAACCACGACGTCAACACAAGCAGGGTTCAAACAATGCGTTACGCTCCGAATcagatgctgatgatgtggatgatgttgatgacgacgacgatgacgatgaatGCCGGCTGCGCATTGTCGAAGATGGCTACAGCAATGATGAAGATGAGCAGCTGGCGCGTTTATCATCAGCGAATACgcaaaccaacaacagcagcggcatcAATACCGCCGATCTTCTAAAGCTGCTCTCTGACAGCGAAATTGAGAATCTGCTTGAGCTTATGATGGAAGGTGATTTGCTGGAGGTGTCACTGGATGAGACGCAAGAATTGTGGCGCATACTGCAAACAATGCCGCCAACAATGCTGCAAGCGGAGGCCAAGGCACGCGTGGCACAGCAtatgcagcaacagcagacacTGGGTGCAAATGCTCTAACTACAGGCGCCTCCTCGTCGAGCATACACAGCGGCGCTGATGATTCGAATGACAGCCTGCTTGTTCAAAATAGTCCAAGTCCCAATGCACAAGCTGTGCGCAGTAAGAAGCGTCGCTCGAATGACTCTAGCGCCAATGTGGCTGTGCCGCGCAAGAAACAAAATACGCCCAAGCAGACGCCGGGCAAAAAGCAAGGGGTACGCAAAAGCGATAGCAAGGCAAGCACCTCACCTGGCGTTGATGCCGATGCCGAGAATAAGCAGGCAAATGGTGGCAATACCATAagcaccacaacaacaacattattaGCAactccaacaacagcaacgtcgGGATTAGCGGCTGGTGCTGTTGGAACAACAGGCACAATTGCCACACCAACAACTACAACCACCCAACCAGGCTCGGCTGGTCATAAGAAACGTAAACGCACCACCACTACCacaacaaccaacaataacaacaataataataacaacaacagcggcggcggcggcaacaaCAGTGGAACTAATAGCAATGCAGGCGGCACACCAACAGCGGGCACTAATCCCATAACAGGTGGCGGGCAAAAGAAGCATGCGCAACGCACACAGCAAACGGCGCAGGAGGATGACGAAGAGGAATGCCGGGCAGAGAATTGCCATAAGCCAACGGGACGTGAGGTGGATTGGGTGCAGTGTGATGGTGGTTGCAACGAATGGTTCCACATGTACTGTGTGGGCCTGAATCGTAGTCAGATTAAGGCGGACGATgactacatatgtatacgcTGCTCCAAGACGGTCAGTGTGGGCGTAGCTGGTGGCAGCAACAGTAGTCTAACAgtcaccacaacaacaaccagcagCTTGACGTTAAGCACAGGGACACCGGGTAAGCAGCGAGCAGCGCAATCAGCGCGATAG
Protein Sequence
MSAKTEADNPAASATASGGGLNSSSNGTITPARRLRTRNSTGSGSESAKKNTSHNNNNNNNNNESVLTGNDATGSSSSTTPASGGGAGGSLSSANPTPSSVERSMPSVPMNHASSSVSASRKYHNSCPHPIPTVHKKTLHTKPHSTNKFDEGKNEEFHFDTPPECPVFRPTVEEFKNPLAYISKIRSIAEKCGIAKILPPEKWAPPFAVDLDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGTGATAGGVSSTGATPVKLEDVGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNAGCGLNMAKPGCAASNAVAAVAAAAAAACAIKTETKEDFKRDLLSSFNAVNIAGGGGGAAAAANSTTGGGGGGGAPAPAPNTRATHKKATTEQSQQPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLGQFGEMAEQFKQEYFRKPAHLVTTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSHYLLPGDQEYAESNWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSRAEQFEQTMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDRLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDANTPTSVTLAELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVDRAKAHLQQSLEVLEENELETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYKDVETLLHTAAAELDPTDPYVDREMRKLQTIGAAIEAWELQAAKYFRRLNQQHELAEIEQFLKSASEINGQVPSHGMLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLSIPIQLEELGRMQGHLNSAHQWKENTAQAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPAEIVASFKQAEEQELRDMRDLRRQNMTKNSLRDVFCLCKSEFRGLMYNCQLCRDWFHEDCVPSPPTMHPLAAQQNGNGGGAINGETSAATQAKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAALDAILLQQQKRRTESGSGGMAVLGNINSPRKPRRQHKQGSNNALRSESDADDVDDVDDDDDDDECRLRIVEDGYSNDEDEQLARLSSANTQTNNSSGINTADLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILQTMPPTMLQAEAKARVAQHMQQQQTLGANALTTGASSSSIHSGADDSNDSLLVQNSPSPNAQAVRSKKRRSNDSSANVAVPRKKQNTPKQTPGKKQGVRKSDSKASTSPGVDADAENKQANGGNTISTTTTTLLATPTTATSGLAAGAVGTTGTIATPTTTTTQPGSAGHKKRKRTTTTTTTNNNNNNNNNNSGGGGNNSGTNSNAGGTPTAGTNPITGGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAGGSNSSLTVTTTTTSSLTLSTGTPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00901271;
90% Identity
iTF_01320972;
80% Identity
-