Spol008235.2
Basic Information
- Insect
- Scaptomyza polygonia
- Gene Symbol
- grh
- Assembly
- GCA_035044585.1
- Location
- JAWNNU010000936.1:553701-583454[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.44 4e+03 -2.6 0.6 121 144 164 187 148 196 0.49 2 3 3 2.7e+04 -11.9 13.7 85 111 236 261 162 286 0.57 3 3 3.9e-63 3.6e-59 200.4 0.5 24 221 651 843 637 845 0.94
Sequence Information
- Coding Sequence
- ATGCAGGATGCAACGAGCAGTTATGCCATCTCCTACACGGACTGGATAACGGAGTCACGGCGCTTTAGCCTGGATCAGCAGCAAGAAACGCCGCCCCCGCcccaccaacaccaacaccaacaccaacagcaacaacaccaacaacagcagccgcatcatcaccatcatcagGAGCtacagcatcatcatcatcatcatcttcctaatcatcatcattatggTAGTCAATCGCCACCGCATTACACATATGAGCCGTCTAAGGATGCAACACATTTGGTGCAACATCTGCCACTGACCGCCGCTGGGCTCTTGCAATCAGTGGCCGCCGAGATACAACTAAGTGAACAGCATTCGacaccaccgccaccaccgccgccactGCCACCCCCTCTACCACCGCAGGCACACGCCTCCAATGCCAGCTATGCCGTCTACAGCTACTACCGTCCAGATGTCGATGTCGAAGTCGATGAAGTCGATGttgatcaacaacaacagcaacaacaacagcaacaacaacaacagcaacaacaacagcaacaagatcAACAGCTACTGTGGAGtaaTGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCGCAAAATGAAATTCAAGGCTTTCTGCTTGGTTCACACCCCTCATCGTCGGCCGCCACAGCCGGCGTTGTGTCCACAACAACAATCTCAaatcagcaacatcagcaacaacaacaacaacaacagcaacaacatcagcagcaacagcaacaacagcaacaacatcagcaacaacaacaacaacaacagcagccacatCCCAGCGATATTGTGACCATAACCACAGCGGGTGTGGGGAGCGCTGGCTCAATTGTCTCTGCAGccgtgcaacaacaacaacaacaacaattgctaaGCATCAAACGTGAACCCGAAGATCTGAGCAAGGATCCGAAGAATGGGAATCTGGGCGCCGCAGCAAACGGTGGCGGTTCAGTCATATCGCAAAAGATATATCGCGTGGATGCAGCTAGTACTGAAGTTGAGGCAACTGCATTTGAAATAAGCGATaaaactgctgctgcaacaacaacaagtgaaaCTGCAACTAGTCCCGTCAGAGCCACACCAGATCTAGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACTTCGCATCAGAACAACACCGGCCCCAACACACAGCAGAGCTCATTGCAAGCGCAGAGTCCCAGTCCCGGGCCGTATATCACAACGGATAGTTATGGCATGTATACGGCAACCAGACTGCCGCCCGGCCCACCACCCGCCACTACATTCATAACGGAACCCTATTACCGCGAATACTTTGCACCCGATGGCCAGGGCGGCTATGTGCCCGCCGGTACGGCGCGTAGTCTCTACGGCGAGGATGTTTCTGTTTCGGCAGCTACACAGCCGCAGCCGGTTGGAGGCGTTTATGAGGCTCGTTTTACCAGCAATGTTCCCACCACCACCACAGTGCTTACCAGCTGCAATGCACACCACAGTCACCAcagtcaacagcagcagcaacagcaacaacaacagcaacaggaacAGTCGGTTAAAAACGGCAGTACTCCATTGTATGCCAAGGCAATAACGGCGGCGGGTCTGACCGTCGATTTGCCCAGTCCCGATTCGGGCATTGGCACAGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGTAGCTTAATTGATGCTAATGGCAGCATACCCGTTTCAGTTAACAGCATCCAGCAGCGCACTGTGGTGCACGGCAGCCAGAACAGTCCGACCACATCTCTGGTGGATACCAGCACAAATGGCTCAACACGTTCAAGACCCTGGCACGACTTCGGACGCCAAAATGATGCtgacaaaatacaaataccaaaaatTTTCACAAATGTGGGCTTTCGTTACAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTGGAATATGTGCACGATGCGGATAAGCCAATCAAAAATACAACTGTTAAGAGTGTGATCATGCTAATGTTTCGCGAGGAGAAGAGCCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACCAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAAAGCTCTGCCAAGATCAACATTGCCGTTCAGTGTCTGAGCACGGATTTTAGCAGCCAAAAGGGAGTTAAGggtcTGCCGTTGCACGTACAAATCGATACGTTTGAGGATCCGCGGGATGCGACAGTCTTCCATCGTGGCTACTGTCAAATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGACGAGGAGCGTCGTGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTGACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCGGTGCTCTTCTCGCCCGCTGAGGATATGGAAAAGGATGTTCGACCTTGGCCGGATTTTGACAACAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCATCGCCGTTCTTGTTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTCCACAATCATTTTCCGCCCGACATGCAGACTGATAAAAAGGATCATATATTGGATCAGAGTATGTTAACCAGCACGCCCATGTCCGATTTTGGGCCACCAATGAAACGGGGCAGGATTACACCGCCGACAACGGAACGTGTCATGTTGTATGTGCGGCAAGAGAACGAAGAGGTCTATACGCCGCTCCATGTGGTACCTCCCACCACAATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatctCAACAACGAGCATAAATAACATATATCGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCGTTTTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAACAAATCGAGGATGACCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAATAG
- Protein Sequence
- MQDATSSYAISYTDWITESRRFSLDQQQETPPPPHQHQHQHQQQQHQQQQPHHHHHQELQHHHHHHLPNHHHYGSQSPPHYTYEPSKDATHLVQHLPLTAAGLLQSVAAEIQLSEQHSTPPPPPPPLPPPLPPQAHASNASYAVYSYYRPDVDVEVDEVDVDQQQQQQQQQQQQQQQQQQQDQQLLWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATAGVVSTTTISNQQHQQQQQQQQQQHQQQQQQQQQHQQQQQQQQQPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGGGSVISQKIYRVDAASTEVEATAFEISDKTAAATTTSETATSPVRATPDLEMYATTGGTQIYLQTSHQNNTGPNTQQSSLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVSAATQPQPVGGVYEARFTSNVPTTTTVLTSCNAHHSHHSQQQQQQQQQQQQEQSVKNGSTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKDVRPWPDFDNSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRITPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00476386;
- 90% Identity
- iTF_01325426;
- 80% Identity
- -