Spar003867.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Scaptomyza parva
Gene Symbol
srp
Assembly
GCA_035044645.1
Location
JAWNNT010000068.1:1892910-1905581[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-18 8.5e-15 54.0 2.7 1 35 957 990 957 991 0.97

Sequence Information

Coding Sequence
atgacaAAAACTAGCAAGGGAAAAGAAAAGGATAAAAGCAGTACTGCAATGCCGCGTGTGTCAAGCAATTTACTGGCAAATGCTGCCAAAATGAAGATCACCAAAGCCCTGGCCAATGCCAAGAAGCCAGCATTGCAAAAAGGCGCTGGCGacaagccaacaacagcaacaggatcAAATGCAGCAGCTGTAGCCACAGCACTAGCAGCGAGAACAGCATACATTCAACAGGCGTTCGCTGCGAAAGAGACGGCAATAGCGGCGGCGGTGCAGGAGAACGGCGACGCTGCGCACAAGCAGTCGGCAGCGACGCggacgtcgccgtcgccgcttGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCATACATCAGTTGCCAGCGAAACAGCAAAGCAAACGGTTACCagcgcaacaacagcaacggcgacagcaaacgcaacagcagcaacaattgcaaattcAACGATCGGTTTTGCTTATGATGATGAGAGCAACGTAGGTTGTGACGTCACAAGCAAAATTATTGCAGACGAATCGgctaacaccaacaacaatccaGATAAAGTCGAGCCcaaaagcgaaagcgaaacGAAGCTAGTTGTagtagaaacaaaaacaataacggcagcaacaacaacaacagcagcaacaacaacaatagtatcAACAGCGAGcgataaatattacaaaatcgTTGATAAGTGCAAAAGTGAGATAAGTAAtgaaaacacaacagaaacagcaacggctacagcaacagcaacaacaacaacaacatcaacatcagctaCTATTTTGCCGGTTGTAGTGATAAATAGTAATCAGCAAAGCGACGCGAGTGAAAGTGttgacaacaaaatcaaaagtgaaacaaacGAACAGGAACAAACTGCAACAGGAACATCAGCAATTGCTGAATTCCCGCAGCATTATCGTGGTCTCAACAATTCGGTAATTATAACCAATTATgcgcatcagcagcaacaggccgagcaacaacaaatttacgagcagcaacaatatttgCAACATCAATTACtaaaccaacagcagcagcagcagcaacagcaacaggagcaacaacagcaacagcacccgACCTGGTTGACTTACAACAATTGTGCATACGATTtaactagcagcagcagtgcggcagcagcagcagcactggcCTCACAGCAACTGTTAGCGCATTTTCCCTATCATCATCCGCACGCGCACTTGTACGAGccgcagccgcaacagcagcaacatcacagcgccaacagcaacagcagcagcagcacggaTCCCATAATGCGTAACAACTTTACGCTGTACAGCGTTTATGGTGGAGGTGGCGGCGGAGGTGGTGGCGGTGCCATCACGCCCACCTCACatgaacaacagcagcttcagcaacatgttgccgcggtggcaacagcagcagccaactcGGTTATTGCCCACACAACGCACGCCCAAACACCCAATATTGATGAGGTCATCCAGGATACGCTGAAGGATGAGTGCTTCGATGACAATCATAGCACCAGCTATCACATGTTGACAGCCGTCTCCGATTTGCAGGTGTTGAAGGAGGCAAATGCGGCAATTTACTCCATGACACACGAGCagttgctgcagcaacagcagcaccagcatcaacaacatttgcaacatcatcatcatcagctgcagcagcaacaacagcaacatgcactccatcatcatcaaccacatcatcatcacaacAACTCGGCCAGTTCGGTGGGTGGCGATTCGCCATCTCCTTCACACACTCTCGCCGCCGCTGCCCATGCCAGCGATGTGGCAACGCTGCAGAGTTTTACACAACTAACCCGGGCGTCTCCCAGCAGCGGCTTGCATCCCGATAACTACGGAAACTTCTCACCCGAACATGCCAGCTACTTTACCACACAGCTTAGCCCAGGGCTGCATAGCAGctCTGTCTATGCAAGTCCTTTGCTTGCTTCGGCTGCTAATGGCTTGCAGTATGGCATGCAAACGGTGTCCTCACCCACCCACACGCACGCCCatctacagcaacaacatcaccagcaccaacaacagcaacagcaacagcagcatcagcaacaacagcagcagcaacagcaacatcatcaacatcacaACTCGACAAGCAGCAGTCCTGGACCAACAGTGGGTCAACTCCATACGACTAGCTCAACGGCAGCTGGACACAGCTCCCTGCTAGACGACGGCTATGGATCACCAAAGAGCAGCCACAGTGGCAACGGCGCCAGCCACGTTGGCACCTTGCCAGCCTTTCAACGCATTGCACCCACCAGTGCTGGTGCTGGCTATGGTAACGGCGTGGCCAATGGATCTGGCACTGTTGCCGAACGAGCTGGCTACGCATCGCTGGCCAATTACCGCACTCACGGTGATAGCTGGAGTGGTCACTTTGAAACAATTGGCTACGCGCCTAGTGCCAACAGCCAGGGACAGTTGGGTGGCAGCGGTACAAATGTGATACGCAATGGAcgtgttgttgccgccgctgccgcagcCGCCGCTGCTGGTAGCGATGGTggtgccaatgccaatgctgTCGATCCTGCACGAGCCTTTCTCACCAATGCCGGTCATCTCCCTGCATCGGCTTCGCTAACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATATAATGTGACCACCGGTAGCCGCAGTAAGGCCACAACAAATGCCAACAGCGCTGCCGGTTCCGGCGCAGGCTCAACGTCAGCGACAACGTCGTCAGTGACTTCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCCTCGAGACGTGCTGGTATGTCCTGTTCCAACTGCCAGACCAGTTATACATCGCTGTGGCGTCGCAATCCTGGCGGCGAGCCCGTTTGCAATGCCTGTGGGCTTTACTACAAGCTGCACAATGTGGTACGTCCACTGACCATGAAGAAGGACACCATTCAGAAACGCAAACGTAAGCCAAAGGGCACCAAGAGTGAAAAGACGAAAAAATCGATGCGAGCTTCCCAAACGGCTTCATTGGTTGCCTCAAGTGCCAACAATGCCTGCCACAATGTGGCCATGCAGCTGGACTCCCATGGCCAACAATTGGATGCCAACGATGAAACGAAACCACTTGCATATATGTCATCATACGcatcgcaacagcaacagcagcagcagcagcaacaacagcagcagcagcagcaacagctacagcagcaactAAGCATTGAGCAACATTCATCAGCGGCAAGCTCACCGCAAAGCATGGCATCATCCTCATTATCACCCAATGCgacatcacaacaacaacaacaacaacaacagcagcagcagcaacaactttgtGCCGGCCTAGATATGTCGCCCACATCCTCCTATCAAATGTCGCCCATTaatatgcaacagcaacagcaatcatGCAGCATGCACCAGCATTCACCAACAACCCCCACATCGGCCATGTCACATTCCATTTATTCCACACCATCGCCCACGcagcttaacaacaacaacaacaactcactATTTaatcacaacaataacaataaccacaacaacaatagcaatgagaataacaaacaaattatacaGAAATATCTGGAAGCTCAACAATTgagaaacaacagcagcagcagcgatcaACAATTATtggcacaacagcaacttaTGCACCTGATGCCGAACTCACTTAcggcagcagctgcggcagcagcagcagcggcgtcGGCCATCAACACGGCGATCAAATCGGaatcagccaacaacaacaacagcagcagcaaaatattggatgccacaacaacagcaacaacaccgacCACGGCATCGAACACACTATCCTCACTgagccacaacagcagcagcaacattatcAGCCTGCAAAATCCGTATCAACAGCTTGGTCAGACGGAGATGCCCTTGTGTAAAGCGGCGCTAAGCGGGCGCACCTCATCCCCCTACTATCATCTAACCGACGAGGAACAACCTTCCATTATAAAACTGGAGCAAATggatcaacagcaacagcagcaacaacatcaacatcaacaacatcaacaacaacagcatcagcaacaccagcaacatgATGAACTTTTGCTTAGCCGTTCCACATCCATTGACGAACACTACGAACTGGCCGCCTATCACCgccaacagttgcaacagcatcaacacaatcttcagcaacaacatgacCAAAATATTACCAGCTATGCGTTGCATGCTGctgcacagcagcaactacatgAGTTTGGACGCAAATTTGGCGTGGAGCGCGAGACAATTGTTAAAATGGAATAA
Protein Sequence
MTKTSKGKEKDKSSTAMPRVSSNLLANAAKMKITKALANAKKPALQKGAGDKPTTATGSNAAAVATALAARTAYIQQAFAAKETAIAAAVQENGDAAHKQSAATRTSPSPLATANLSSTFESKAHTSVASETAKQTVTSATTATATANATAATIANSTIGFAYDDESNVGCDVTSKIIADESANTNNNPDKVEPKSESETKLVVVETKTITAATTTTAATTTIVSTASDKYYKIVDKCKSEISNENTTETATATATATTTTTSTSATILPVVVINSNQQSDASESVDNKIKSETNEQEQTATGTSAIAEFPQHYRGLNNSVIITNYAHQQQQAEQQQIYEQQQYLQHQLLNQQQQQQQQQQEQQQQQHPTWLTYNNCAYDLTSSSSAAAAAALASQQLLAHFPYHHPHAHLYEPQPQQQQHHSANSNSSSSTDPIMRNNFTLYSVYGGGGGGGGGGAITPTSHEQQQLQQHVAAVATAAANSVIAHTTHAQTPNIDEVIQDTLKDECFDDNHSTSYHMLTAVSDLQVLKEANAAIYSMTHEQLLQQQQHQHQQHLQHHHHQLQQQQQQHALHHHQPHHHHNNSASSVGGDSPSPSHTLAAAAHASDVATLQSFTQLTRASPSSGLHPDNYGNFSPEHASYFTTQLSPGLHSSSVYASPLLASAANGLQYGMQTVSSPTHTHAHLQQQHHQHQQQQQQQQHQQQQQQQQQHHQHHNSTSSSPGPTVGQLHTTSSTAAGHSSLLDDGYGSPKSSHSGNGASHVGTLPAFQRIAPTSAGAGYGNGVANGSGTVAERAGYASLANYRTHGDSWSGHFETIGYAPSANSQGQLGGSGTNVIRNGRVVAAAAAAAAAGSDGGANANAVDPARAFLTNAGHLPASASLTAMAAESGGDFYKTFPYNVTTGSRSKATTNANSAAGSGAGSTSATTSSVTSTALDEHVSRANSRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYYKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKTKKSMRASQTASLVASSANNACHNVAMQLDSHGQQLDANDETKPLAYMSSYASQQQQQQQQQQQQQQQQQLQQQLSIEQHSSAASSPQSMASSSLSPNATSQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQSCSMHQHSPTTPTSAMSHSIYSTPSPTQLNNNNNNSLFNHNNNNNHNNNSNENNKQIIQKYLEAQQLRNNSSSSDQQLLAQQQLMHLMPNSLTAAAAAAAAAASAINTAIKSESANNNNSSSKILDATTTATTPTTASNTLSSLSHNSSSNIISLQNPYQQLGQTEMPLCKAALSGRTSSPYYHLTDEEQPSIIKLEQMDQQQQQQQHQHQQHQQQQHQQHQQHDELLLSRSTSIDEHYELAAYHRQQLQQHQHNLQQQHDQNITSYALHAAAQQQLHEFGRKFGVERETIVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01328262;
90% Identity
-
80% Identity
-