Basic Information

Insect: Scaptomyza parva
Gene Symbol: ken1
Assembly: GCA_035044645.1
Location: JAWNNT010000065.1:1643472-1645859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.067 4.4 7.9 5.9 3 23 252 272 250 272 0.96

2 12 0.00029 0.02 15.3 0.5 1 23 278 303 278 303 0.94

3 12 0.0019 0.13 12.8 1.2 1 23 310 335 310 335 0.93

4 12 0.00094 0.062 13.7 4.0 1 23 345 367 345 367 0.97

5 12 0.0019 0.12 12.8 2.2 1 23 374 396 374 396 0.97

6 12 0.0072 0.48 10.9 0.5 1 23 402 424 402 424 0.97

7 12 0.053 3.5 8.2 2.6 1 23 430 453 430 453 0.97

8 12 0.019 1.3 9.6 4.1 1 23 459 481 459 481 0.95

9 12 0.021 1.4 9.5 2.6 2 23 488 509 487 509 0.95

10 12 0.00018 0.012 16.0 0.8 1 23 598 621 598 621 0.95

11 12 0.00037 0.025 15.0 0.8 1 23 627 649 627 649 0.95

12 12 9.9e-06 0.00066 20.0 2.3 1 23 655 677 655 677 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.067	4.4	7.9	5.9	3	23	252	272	250	272	0.96
2	12	0.00029	0.02	15.3	0.5	1	23	278	303	278	303	0.94
3	12	0.0019	0.13	12.8	1.2	1	23	310	335	310	335	0.93
4	12	0.00094	0.062	13.7	4.0	1	23	345	367	345	367	0.97
5	12	0.0019	0.12	12.8	2.2	1	23	374	396	374	396	0.97
6	12	0.0072	0.48	10.9	0.5	1	23	402	424	402	424	0.97
7	12	0.053	3.5	8.2	2.6	1	23	430	453	430	453	0.97
8	12	0.019	1.3	9.6	4.1	1	23	459	481	459	481	0.95
9	12	0.021	1.4	9.5	2.6	2	23	488	509	487	509	0.95
10	12	0.00018	0.012	16.0	0.8	1	23	598	621	598	621	0.95
11	12	0.00037	0.025	15.0	0.8	1	23	627	649	627	649	0.95
12	12	9.9e-06	0.00066	20.0	2.3	1	23	655	677	655	677	0.98

Sequence Information

Coding Sequence: ATGAATGAAGGGAGTGAATACTCCATTCACTCAATATGTCGATTGTGTTTAAATAACTTACAAAATGATGCTGCCTACGACTTGTTTCTGGTTCCAGGTCTGgcaaaaaaattgtgtgtgtgcacttcaCTCTCAGTGGAACAGCACGATGGTTTCCCGAAAAACCTTTGCACCAATTGCTACACCAAACTTAATGACTTGCACGGATTTCAGAAGCTTTGTGTGGACTCTGTTCAAAAGTTTCAAGAAATGGTTGCCagcaattattttgttatgccTGTTATTGCCGATATTAATCAAATTGACAATGTCGACATTCTGCATGTTCCACCGCACGATGGTGAAATGGAGGAAGATCGCATCAATTTCGACCCGCTCCTAAATACGAAAATTGAgctaattgaaaatgaggaggAAGTTTTCAAAATGCTAGAAGATGTCGACAAGGAAACGGAGGAGGTAGACAAAGACAAGGATTCGTCCAATGACAGTGAAGCTGAAAATGAAGATGATAATGATTTTGAAGCAAATAGCAGTGAATCCGACGACGCCAAACCCTTGTCCCGTTTACGAAGTAACACCAGAGCATCTAAATCAAAGGCTAAAAAGCATACtgcagatgatgatgacgatgattcCTCAAGCTCTGATTcggatgacgatgatgaagatgacgTTGATGATAAGCCcagaacaaaaccaaaacgcaAACGCATCCCGGCCGCAGAGAGACACTTGCATCGCCTCATCGATTGTCACATATGTCATCAGAAGTTTAAGAAGGCAATTCGCTACGAGGAGCACATGAAGCATCACAACGATCTTTTGCCATTCCAGTGTACTATAGAGACCTGCAAGAAGGGTTTTACTACTGCTGGGGGTCTACGCCTTCATATGGATCACGCCCATTCGGAGTTTTCTGAGGTTCATGCTTGCACCTTTGAGGGCTGCGATAAAACCTTCCCCCGATCTGTCTTGCTCACGTTCCATATGAAAAAGGTGCACAAAGTGGCCAAGGCTGACACTCGAAATCATCCCTGCACGGAATGCGAAAAAGTATTCCGTTGTCCAACGGCGCtcaaaaaacatatgtataagcACACTGGCGAGGAGCTGCCATTTGCATGTGAGATCTGTGGCAAACGATTCCACATCCACAGTGTGCTTAGGGATCATCTTTTGCGTCATGCTGGTGTTAAGAACCATGTGTGTCCCTACTGCGGCGTCGGCAAAACTACTCGACAAGAGTGGAACAAACACATATTGACCCACACCAAGGAAAAGCAGTTCCAATGTCGCCAGTGCGATCATGCCTCGCACAACAAACAAGCTTTGTCTAATCACGTCAAGGTGGTGCACATGAAGATCAAGAACTTTGCCTGTCAGTATTGCGGCAAAACCTTTGGCAAATCACATGCCTGTAAGATTCACGAGAGGCTTCACACTGGCGAGAACTGTTGCGAATGCAAGATATGCGGCAAAATCTTCCTATTCGAGAAGAGATTGACCAAGCATTTACAGCTTCATGAGAAGCGTGAATTAGTACCGCCTGCAACCGCTGTTAAACCACCGGAAGAGGGAGCTGCACAAAGCACACCAACTGTAAGCCAGGAGGTGACTGAGCCAGTGGACGTAAAGCCTGTGCCAATTGTTCCTCCTAAGCCCAAGAATTCTCATCGAGTCGAACGTGTGGATATATCACAGCTGGCGGGCACTTCTGTTAATCCAATATCGTCGGTATCGGTGCCGTCTTGGTCGCCACAAGTGAACTTTACAAAGAAGGAGGGACAACACATTTGTCCAGGATGTGGACGTGGCTTTAATCACATTGGCAACATGAAGCTTCACTACAAGATTATACACGAGAAGGTCAAGGACTTTGCCTGTCGCTATTGTCCCAAACGCTTTGCCAAGGCGCAGTATCTACGCAATCATGAATATATCCATACTGGAGAGAAGCCGTTCGAGTGCAAGATCTGCGGCAAGCATTTCCGTCAGGAGCAAGTGTTGAAGACGCATTTGAAGGTGCATGACAAGCCCCCGAAGCCTCCTAAAGAGAAAAAGCCGCCGAAACCTACTGTTAGCAAAGCAAAGGGGTTAAAGGTGGAGCTTaacaaaaagcaaccaaaaatttTCGATGAATATCAGGATCCCGCTGCGGAACGTGCCGCGGCTACAGCTGCATTGCAAGCACAACAGGAGGAGGAGGCTGAACTGAAACGCAAGGCGGAAGAGGAGACTCGCAAGATTCAAGAGGCCGCATGCGAACAGCTCAATAGACTTCAGAAGCAGGTGCAGAGCGAGAAGGGCAACTACGATACCTTCTATGGACAAAAAGTGGAGGCCGAGGGAACTAGCTTGGATGCTCTTAAATTAGATCATGTGTAA
Protein Sequence: MNEGSEYSIHSICRLCLNNLQNDAAYDLFLVPGLAKKLCVCTSLSVEQHDGFPKNLCTNCYTKLNDLHGFQKLCVDSVQKFQEMVASNYFVMPVIADINQIDNVDILHVPPHDGEMEEDRINFDPLLNTKIELIENEEEVFKMLEDVDKETEEVDKDKDSSNDSEAENEDDNDFEANSSESDDAKPLSRLRSNTRASKSKAKKHTADDDDDDSSSSDSDDDDEDDVDDKPRTKPKRKRIPAAERHLHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTIETCKKGFTTAGGLRLHMDHAHSEFSEVHACTFEGCDKTFPRSVLLTFHMKKVHKVAKADTRNHPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFHIHSVLRDHLLRHAGVKNHVCPYCGVGKTTRQEWNKHILTHTKEKQFQCRQCDHASHNKQALSNHVKVVHMKIKNFACQYCGKTFGKSHACKIHERLHTGENCCECKICGKIFLFEKRLTKHLQLHEKRELVPPATAVKPPEEGAAQSTPTVSQEVTEPVDVKPVPIVPPKPKNSHRVERVDISQLAGTSVNPISSVSVPSWSPQVNFTKKEGQHICPGCGRGFNHIGNMKLHYKIIHEKVKDFACRYCPKRFAKAQYLRNHEYIHTGEKPFECKICGKHFRQEQVLKTHLKVHDKPPKPPKEKKPPKPTVSKAKGLKVELNKKQPKIFDEYQDPAAERAAATAALQAQQEEEAELKRKAEEETRKIQEAACEQLNRLQKQVQSEKGNYDTFYGQKVEAEGTSLDALKLDHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00610124;
90% Identity: iTF_00508555;
80% Identity: -