Spar009497.1
Basic Information
- Insect
- Scaptomyza parva
- Gene Symbol
- -
- Assembly
- GCA_035044645.1
- Location
- JAWNNT010000101.1:14796125-14799728[-]
Transcription Factor Domain
- TF Family
- THAP
- Domain
- THAP domain
- PFAM
- PF05485
- TF Group
- Zinc-Coordinating Group
- Description
- The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.7e-13 1.8e-10 41.3 0.5 1 87 132 203 132 203 0.80 2 8 2.3e-05 0.024 15.3 0.1 1 58 235 287 235 303 0.84 3 8 5.2e-15 5.7e-12 46.2 0.1 1 86 325 397 325 398 0.81 4 8 4.1e-14 4.5e-11 43.3 0.9 1 86 532 604 532 605 0.83 5 8 2.7e-14 3e-11 43.9 2.4 1 86 665 735 665 736 0.81 6 8 4.4e-14 4.8e-11 43.2 0.6 1 87 934 1004 934 1004 0.85 7 8 2.5e-07 0.00027 21.6 0.4 1 55 1021 1066 1021 1068 0.84 8 8 5.8e-11 6.2e-08 33.2 0.8 18 87 1086 1144 1075 1144 0.76
Sequence Information
- Coding Sequence
- ATGAAGACGGATTTTGGAATCACCACATGTCACGAAACTATCAGGAGAGCTATTAAAAGTATCCACTTTTCATCTCaagctgctcgaaaaaaaccTTTGTCGGCGGGACAGCTTGAGAATGAGGAACAGCCGGTAGATAACGATGAGGAAGATCATCAGGATTCCGAAGGTCATGGCTACATTGATCCATTGGCGCTCGTGGAAAGATTTGCCGAATGTTACAGCGATGATAACTCGTTAGACGACtctgacgatgatgatgatgaggacaTTCCGGGCAATGATGCTGAGCTTCTTATACCTGAAGCACATCCAATTCGACTAACAGCCGCACCACGTCGGGAAAAAGCTGTCAATAATGTGACGACCAACTTTGAGGAGGATGCTTTCATCTGTTGTGTCCCCACCTGCGGACGATCCAAAGATGCAGATAATGCCCTCCTGTTCGGGTTGCCAAAGGTGCGTCAATTGTCAGAGAAGTGGCTGCAAAATATTCGCCTTGATCCGTGCAAAGAACAGTTGACCTGCCTAAGGATCTGCAGTGTGCACTTTGAGGCCAAGTGTTTGGAGAATGGACGTCCCACCTATGGAGCAATTCCAACGCTCCATCTGGGTCACGAGAAACGTGACATACACCCCATTTTGGAACCATTGCCAACAAAACAGAAGCTCTATTGCAATAGAGATGGCGCCAGTCATGACTGTTGCTATCCGCAGTGTGTGGAATTGCAGAAGAGCTATTTGCGTGTCACTTACGAGCTTCCCCAGAAGCAAGAGTTGCGTGATCAGTGGCTCTCCTATATGGACTTGGTGGATCCGCTCGAGAAGCAACAGTTTCCGAAGCTATGTCCGCTACACTTGATTTTGCTGTATGATCACAGTGTGGATAACTTTTCGGCACATGAAGGCGAGGAGCTGTTGGATGCCAATTATGAGGCATCACGCAGTAGCGTTCGCATTCGTATTGTAAGTTGTGCGGTACGTGGATGCAGAACGCTCAAGCCACGCGATGGAGGACGTTTACATGGCTTGCCCACCCGCCGGGATATGCTCGAGATGTGGCTACACAATATGCAGCTGGTGTTTTACGAGCAGCAACGGTATATGTACAAGATATGCAGCAAACACTTTGAGCCCAGATGTCTGACAGAGACAACCAGGCGCCTGAAGCCCTGGAGTATGCCAACGCTGGAGTTACCGGAGCGTCAACCGGGCGAAATGCCTCCGTATCAGAATCCCACAGTGGAGGAGTGGCAGCAAAGGAATGAGCTGCAGGCCAGCGCCAAAGAGATTGAGGCGCCATTGGAATCAATGCTTGAGCTAGAGCCCCTGTGCAAGATGGAACTATCGCCACAGCAGTCGGATATCGAATATGAAGAGGATTATAACTACAACTCACAACAGCCACTGGAAATGCAAGCGCTGGAAGTGCTGCTTGAGGTTGGTAAAGTCGAGAAGTGTGCCACCTATGAGCAAATAGGCACCGAGCCAAATCCCAACTATGCCGAGCAGCTCTCTCCCTTGGGTGCAGCTATACCTCAAAGCTGTAACATTGCGCCTGCCCAAAATGGATTCCATTACAGTGCTCGGGTGTGCAGCGTGCATGGCTGCAATGTCAACGCAAATAATATCGATAGCAATACAAAGCTGCACAAGTTTCCCGTCTCAATGGATGCCATGCAAAAGTGGATGCACAACACCCAAGTGACTGTGGACATTAAGTTTGCTTGGCGTTTTCGCATCTGCAGTCATCATTTTATACCAGATTGCTTCCAGGGCTTGCGCATCATGCGTGGTGCAATGCCCACGTTGCGTTTGGGTTCGCGTCGACCCAAGCACATCTATGACAATGAGTTTAATAGCCAATTGCAGTTTGAACTGCAGTCCAAAGAGCTTGAACCTGTACATATTGATTCtcggcaacagttgcagtcAGCAAGCATTGGCTTTCGCCTGCCACGTCCTGCTCCGCCACGTAAATCTAGCAAATTCTGTCAAGTCAAGGGCTGTTCGAATCATTTAACCAGCGAGAATGTAACGCTACACAACTTTCCCAATTCGGCGGACATGTGCGCCAAGTGGCAACACAATACGCAGGTACCCTTTGATCCAGAGTATCGCTGGCGCTATCGCATCTGCAGCGCACACTTTGAACCCATCTGTATGGGCAATGTGAGGCTGATTCATGGCAGTGTGCCCACACGAAATCTGGGACCGCTTGCTCCCaagaaagtttttgaaaatgatttcattCGTCTGGACAAGCCTAGAAGTTTAGAGCTTGACGCAATGGAGCAATTCGATCAATATGATGGTAATGATGACGGTCATGAGCAGGAGAATTATAGTTTGCTGGAGCCAGAGCTGCAACTACACGAAAGAAGCAATGAAGAGGAGCAACTGTATGACAGTCATTTAAACCGCAAAAATTCATATAACTGGAGCGATCACCAGCTGCGTCTGCCCAGTGTTAAGCAAGAGAAAAGCACCAGCTTCAATCCTTTCGAGTCGGGCTATGACAAATGCTCGTTGGTGCACTGCCAGCTGGAATTGGGTGACAATGTACCAAAGGAGCTTTTTACGAATAAGCAGAGCCAGCAGATGTATGCTCAGTCCGATGCAGGCAGTGAATGTGATGAGCTCGATATAGACGTAGAGGACACAATGTTAGAGGACTTGGACGATAAttttgatgataatgatgaccAATTACACACAGCTCACTATGTTAAGAGGGAACGTCGCTCGCGTTTTGATCCGCTGCCGCCAGGACAGCAGCCCCCTTGGAAGATCAAATCGTGCTGCTTGCCCTACTGTCGCAGTCCTCGCGGTGATGGCATCAAACTCTTTCGTCTGCCCAACAACATTAGCTCCATACGCAAATGGGAACGGGCCACAGGCATGCGCTTCTTAAAGTCCCAGCGCAACACAAAACTTATTTGTAGTCGTCACTTTGAACCGTCACTTGTATGCGTGCGACGTCTAATGTCAAATGCGGTGCCAACCCTCCATCTGGGACCAGAAAGCGCAAACCCTGAGCTGCCTGCTGTTGGCCCACGTTGTTGCATGCTCGATTGTCCCGGGGATGTAAATGTACAGCTGCACAAGTTTCCAAAAGATCCCATGCTGCTGGATCAATGGTGCCAGGCTCTTAATTTACCGAATGCTGAAAGcttttttggcaaatatgtTTGTGACACGCAATTGCCCGCCAACGTATTAAGCTGTCTTATTTGTGGTGTTGACGATGTGCAAATGCCAATGGTAGACTTTCCTGAAAATCGCAATCAGCGCACGAAGTGGTGCTACAATCTTAAAATCGAGCCATTGCCCAAATGGGACAACTCAAAGCACATTTGCTGCAAACACTTTGAAAGCTACTGTTTCATGCAGCCGGGTCAATTGCTACCGGATGCAATTCCCACACTACATTTGAAGCATAGCGATAGCAACATATTCCTTAACGATGATATCATGGACAACAGCAAGATGCTACGCATCAAGGATGAGCCCATGGAAAGCGATGATCTGATGCTGTAG
- Protein Sequence
- MKTDFGITTCHETIRRAIKSIHFSSQAARKKPLSAGQLENEEQPVDNDEEDHQDSEGHGYIDPLALVERFAECYSDDNSLDDSDDDDDEDIPGNDAELLIPEAHPIRLTAAPRREKAVNNVTTNFEEDAFICCVPTCGRSKDADNALLFGLPKVRQLSEKWLQNIRLDPCKEQLTCLRICSVHFEAKCLENGRPTYGAIPTLHLGHEKRDIHPILEPLPTKQKLYCNRDGASHDCCYPQCVELQKSYLRVTYELPQKQELRDQWLSYMDLVDPLEKQQFPKLCPLHLILLYDHSVDNFSAHEGEELLDANYEASRSSVRIRIVSCAVRGCRTLKPRDGGRLHGLPTRRDMLEMWLHNMQLVFYEQQRYMYKICSKHFEPRCLTETTRRLKPWSMPTLELPERQPGEMPPYQNPTVEEWQQRNELQASAKEIEAPLESMLELEPLCKMELSPQQSDIEYEEDYNYNSQQPLEMQALEVLLEVGKVEKCATYEQIGTEPNPNYAEQLSPLGAAIPQSCNIAPAQNGFHYSARVCSVHGCNVNANNIDSNTKLHKFPVSMDAMQKWMHNTQVTVDIKFAWRFRICSHHFIPDCFQGLRIMRGAMPTLRLGSRRPKHIYDNEFNSQLQFELQSKELEPVHIDSRQQLQSASIGFRLPRPAPPRKSSKFCQVKGCSNHLTSENVTLHNFPNSADMCAKWQHNTQVPFDPEYRWRYRICSAHFEPICMGNVRLIHGSVPTRNLGPLAPKKVFENDFIRLDKPRSLELDAMEQFDQYDGNDDGHEQENYSLLEPELQLHERSNEEEQLYDSHLNRKNSYNWSDHQLRLPSVKQEKSTSFNPFESGYDKCSLVHCQLELGDNVPKELFTNKQSQQMYAQSDAGSECDELDIDVEDTMLEDLDDNFDDNDDQLHTAHYVKRERRSRFDPLPPGQQPPWKIKSCCLPYCRSPRGDGIKLFRLPNNISSIRKWERATGMRFLKSQRNTKLICSRHFEPSLVCVRRLMSNAVPTLHLGPESANPELPAVGPRCCMLDCPGDVNVQLHKFPKDPMLLDQWCQALNLPNAESFFGKYVCDTQLPANVLSCLICGVDDVQMPMVDFPENRNQRTKWCYNLKIEPLPKWDNSKHICCKHFESYCFMQPGQLLPDAIPTLHLKHSDSNIFLNDDIMDNSKMLRIKDEPMESDDLML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -