Spar005558.1
Basic Information
- Insect
- Scaptomyza parva
- Gene Symbol
- slbo
- Assembly
- GCA_035044645.1
- Location
- JAWNNT010000090.1:7840972-7842411[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 2.5e+03 -1.5 2.6 30 53 348 371 344 381 0.66 2 2 6.4e-13 5.3e-10 39.1 12.4 3 64 394 455 393 456 0.96
Sequence Information
- Coding Sequence
- ATGCTGAACATGGAGTCGCCCCAGATGTATGCGGATGCAGTACAAACGCTTGCGCAGCTCGACttgaagaagcagcagcagcagcagccgccatCCTTGCCACAGCAGGCAACCATTGGCCAAATAACGCTGACGGCGATGTCcagtgcacaacaacaacaacaacagcagcagcaacagcaacaacaacagcaacaacagcaacagcagcaacagcaacaggtgACAACcgatgcaaacaacaacaatgcaactgTGCAGGATGCGGCATTGCTTCTCAAACAGCATGCGgcaatgcaacaaatgcaactgaacaacaacaacaacagtaacagtaataacaacaacaacagtaacagtttgttgcaaaaacaaatgctgCAACAGTATAGCACACAAACGGACCTCGACGAGCTTACCACACAGGAGATAACACTCGACTTGCAACATCTGATTGATGATCAATTTCGGGATACAGAGACTTTGGGCATTTTCAGTGATATGGTGACGAGTCCGGGTGGACTATCGGCCACATTGCCACCCAGTGGCATGGTGAGTGCAGCGGCCAAagtgttgcagcaacagcaacaaacgcTGGCAAATgcacgccagcaacaacagcaacaacagcagcagcagcaacagcaacagcaacaacaacagcaacaacagaaccCATACGGCAGAGCAGCATTAGCGTACATGCCACAAGCGGTCCATTCGAATGCCAACTACAACAATCATTCGAGTGACGAGAACAGTTCGGTGGGCAGCGATTCGAGCAGCACAATCAAGGAGGAGCCCATCGATCCCGATTATCGCAGGCATTTGCAGGAGTCGGTGAGCAGTCAGgcggtggcagcggcagcgttTATCAATAACACCAGCAATGGCTTGTATAACGCATAtcagagcaacaacagtagcagtaataatagcagcagcaacaacagcaacaacacatcGACAAACTCAACACACTCAACGCAATTCACCAACTTGACCACAGCGAATGTGCTGGCTCATCACAGTTTGCCGCATTTAACGGCGAACGCACAACAGCTGCTCAAACATCACAGTAAGCTCCAGcaatcgcagcagcagcaacaacacaacgcacaccaacagcagcagcatcatcatcgcaAGCACAGTAACAAGCATGTGGATAAGGGCACCGAGGAGTATCGCAGGCGGCGAGAGCGCAATAATATTGCAGTTCGCAAGAGTCGCGAGAAGGCAAAGGTGCGCTCCAAGGAGGTGGAAGAGCGCGTCAAGTCGCTGCTTAAGGAGAAGGATGCTCTGCTGCGTCAGCTGAGCGAAATGACCAATGAGCTTTCgctacacaaacaaatatatatgcagCTCATGAATCATACAAATCCCGAAGTGAGCCGCGTCTGTCGCAGCTTTCTCAATACAAACGAACATGCGCTGTGA
- Protein Sequence
- MLNMESPQMYADAVQTLAQLDLKKQQQQQPPSLPQQATIGQITLTAMSSAQQQQQQQQQQQQQQQQQQQQQQQQVTTDANNNNATVQDAALLLKQHAAMQQMQLNNNNNSNSNNNNNSNSLLQKQMLQQYSTQTDLDELTTQEITLDLQHLIDDQFRDTETLGIFSDMVTSPGGLSATLPPSGMVSAAAKVLQQQQQTLANARQQQQQQQQQQQQQQQQQQQQQNPYGRAALAYMPQAVHSNANYNNHSSDENSSVGSDSSSTIKEEPIDPDYRRHLQESVSSQAVAAAAFINNTSNGLYNAYQSNNSSSNNSSSNNSNNTSTNSTHSTQFTNLTTANVLAHHSLPHLTANAQQLLKHHSKLQQSQQQQQHNAHQQQQHHHRKHSNKHVDKGTEEYRRRRERNNIAVRKSREKAKVRSKEVEERVKSLLKEKDALLRQLSEMTNELSLHKQIYMQLMNHTNPEVSRVCRSFLNTNEHAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00494862;
- 90% Identity
- iTF_01320226;
- 80% Identity
- -