Basic Information

Insect: Scaptomyza pallida
Gene Symbol: nfxl1
Assembly: GCA_018152965.1
Location: JAECXP010000080.1:6172413-6175430[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2 1.9e+04 -8.1 6.4 15 19 148 152 147 152 0.82

2 20 0.13 1.2e+03 -0.3 0.4 4 10 183 189 182 189 0.95

3 20 6.5e-08 0.0006 19.8 15.5 1 18 197 213 197 214 0.98

4 20 1 9.6e+03 -3.2 2.7 6 10 240 244 239 244 0.89

5 20 5.5e-08 0.0005 20.1 15.9 1 19 250 269 250 269 0.98

6 20 1.2 1.1e+04 -3.4 0.9 5 10 293 298 293 298 0.92

7 20 1.8e-07 0.0017 18.4 14.2 1 19 304 323 304 323 0.96

8 20 0.82 7.5e+03 -2.9 0.5 1 8 347 353 346 354 0.50

9 20 1e-07 0.00097 19.2 11.8 1 18 357 374 357 375 0.96

10 20 0.7 6.5e+03 -2.7 0.4 1 5 384 388 384 393 0.73

11 20 2 1.9e+04 -5.0 2.3 5 10 398 403 398 403 0.91

12 20 0.022 2e+02 2.2 15.9 1 18 409 426 409 427 0.94

13 20 3.3e-08 0.00031 20.7 14.7 1 19 436 454 430 454 0.90

14 20 1.1 1e+04 -3.3 2.0 6 10 482 486 482 486 0.98

15 20 5.4e-05 0.5 10.5 7.2 9 18 499 508 497 509 0.90

16 20 0.027 2.5e+02 1.8 5.7 1 11 521 530 521 531 0.95

17 20 4.5e-06 0.042 13.9 4.3 1 11 596 606 596 607 0.96

18 20 0.023 2.1e+02 2.1 15.4 3 19 636 652 635 652 0.92

19 20 1.3 1.2e+04 -3.5 1.5 8 13 657 662 656 663 0.76

20 20 5.1e-07 0.0047 17.0 11.4 1 16 703 717 703 723 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2	1.9e+04	-8.1	6.4	15	19	148	152	147	152	0.82
2	20	0.13	1.2e+03	-0.3	0.4	4	10	183	189	182	189	0.95
3	20	6.5e-08	0.0006	19.8	15.5	1	18	197	213	197	214	0.98
4	20	1	9.6e+03	-3.2	2.7	6	10	240	244	239	244	0.89
5	20	5.5e-08	0.0005	20.1	15.9	1	19	250	269	250	269	0.98
6	20	1.2	1.1e+04	-3.4	0.9	5	10	293	298	293	298	0.92
7	20	1.8e-07	0.0017	18.4	14.2	1	19	304	323	304	323	0.96
8	20	0.82	7.5e+03	-2.9	0.5	1	8	347	353	346	354	0.50
9	20	1e-07	0.00097	19.2	11.8	1	18	357	374	357	375	0.96
10	20	0.7	6.5e+03	-2.7	0.4	1	5	384	388	384	393	0.73
11	20	2	1.9e+04	-5.0	2.3	5	10	398	403	398	403	0.91
12	20	0.022	2e+02	2.2	15.9	1	18	409	426	409	427	0.94
13	20	3.3e-08	0.00031	20.7	14.7	1	19	436	454	430	454	0.90
14	20	1.1	1e+04	-3.3	2.0	6	10	482	486	482	486	0.98
15	20	5.4e-05	0.5	10.5	7.2	9	18	499	508	497	509	0.90
16	20	0.027	2.5e+02	1.8	5.7	1	11	521	530	521	531	0.95
17	20	4.5e-06	0.042	13.9	4.3	1	11	596	606	596	607	0.96
18	20	0.023	2.1e+02	2.1	15.4	3	19	636	652	635	652	0.92
19	20	1.3	1.2e+04	-3.5	1.5	8	13	657	662	656	663	0.76
20	20	5.1e-07	0.0047	17.0	11.4	1	16	703	717	703	723	0.90

Sequence Information

Coding Sequence: ATGGAAAAGTTTAATAAAGCGCAGGCAAAGAATTTGGCAGCCGCAAAGAAGCTCGTAGATACGTATGCATCAAGTTCTGAGGATGAAGGCGAACTTGATGAAAAACACATTCTTGATCTACTATACAAGCATTATAAACCTTCGCCGGATAACTCGAGTACCAGCAACAATGCAAATCGTACAGCGACTTTTTTGGAAAATAGCCTTCATTCGGGAGCGGCGACCTGTCTGATATGTATTGGCAGCATACGACGTGTAGAGGGCATTTGGTCCTGCAAGTCATGCTACTGTTTCTTTCATCTCAAGTGCATCCAGCGCTGGGCTAACGACAGCGTCATGCAAATGAAAGTCAAGGCAGAGCAACAAAATGGCAGCCAGGGACACTACAATCATTTAGGCGAGTTTGTGCCACCAAAGCGTCCCAAATCGTTGCACTGGTGCTGTCCACAGTGTCGTACGGATTACCAGCCAGCTGATCGGCCCACACAATATGAATGTTTCTGCGGCAAGGAGGTCAATCCACAGGCACAACCCTTTCTTGTGCCGCACTCTTGCGGCGAGATCTGTGGCAAGCTGTTGCAGCCGAAATGTGGCCATGACTGCAAGCTTCTGTGTCATCCGGGTCCGTGTCCGCCTTGCGCCCAATTGGCGCATAGTGCTTGTCTATGTGGCAAATCTGCACCACGCTCGGTACGCTGCATTGACAAAAACTGGCAGTGCCAACAAACGTGTCAATCTTTGTTGTCCTGTGGCAAGCATAAGTGCAACCAAAGATGCCATCGTTCAGGGCAGTGCCCACCCTGCAGCAGCAAAAGTTCCCAGTATTGCGATTGCAAACGCGAACAAAAAGTTGTTAATTGCGCAGACCCAAAATGGAAGTGTAAAAATATATGTGGAGCTCTATTTGACTGTGGTCTGCATAGCTGCGACAAGGTTTGCCATGCTGGTCCCTGTGGCGGTGAATGTCCCTTGGGCGTCCGCAGTTGCCCATGCGGCAAAAGCGTCAAAACTGGTGGCTGCAGCGAAGTATTGGAAACCTGTGGCGACACCTGCCAAAAGGTATTGTCCTGTGGCAAACATAGCTGTGCTCAACGTTGCCATCGCGGTCCTTGCAACCTGTGTCTGGTGCGCACCACAAAGAAGTGCCGTTGTGGACTGCATGAAAAGGAGCTACCCTGCTCCAAGGATTTTACATGCGAAACAAAATGCAAACTTATTCGCGATTGCAACAAGCATGCCTGCAATCGCAAGTGCTGTGGCGATCAGTGTCCGCCTTGCGAGAAAATCTGCGGCAAGCAGTTGAGTTGCAACAAGCACAAGTGTCAGAGTGTTTGCCACAATGGACCCTGTTATCCGTGCAAGTTGGAGTCGCAGGTCAATTGCCGTTGCGGCAAGACGCGTCGCAGCGTTCCGTGTGGCAGGGAAAAGAGTGCACGCATTGTTTGCCAGGAGCTCTGTCGCATCTCTGCCAAGTGTCATCATGCTATCAAGCATCGTTGCCACAAAGGCGAGTGCCCGCCGTGTGCACAACAATGTGGCTTACCCAATGATATCAGCGGCTGTGGACACATATGCAAGGTGCGCTGCCATGCAGCTATTCGTGTACCAAAACCAGCAGATGCAGTGCGTCCGCATGCAAATAAGTATGAATACCGTGCACAGCCGCATCCACGCTGTGAGGAGGGTATCAGCGTCACCTGTATTGGTGGTCATGAGATCGCCACCTGGCCGTGCTGGAATTCCAAACCGCAATCTTGTGCACGCAAATGTGGTCGTCAATTGAAATGTGGCAACCATAAGTGCCAACTATTCTGTCATGCAGTACCGAATCTCGTGGATATGCAACAGCAGATGGGCTGTTCTAATTGCGAGCAGGGATGTGCTATTGCACGTCCTGCCGGCTGCACGCATGCCTGTGCCAAAGGCTGCCATCCGCCGCCTTGTGCGCCTTGCAGTTTTGTTATCAAGAACAAGTGTCATTGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGAGGGATCAGTGCAGGATATTTTAGATCGCCGTCAGAAGCTGTGCAGCTGTGGAAATCGCTGTTTAAAGAACTTTGCCTGTGGGCATCGCTGCATGACTATATGCCATCCCGGCCCATGTCCAAATCCTGATATGTGCAGGAAAAAGGTCAAAATTTATTGTGCTTGCAAGCGCATCAAGCTGGAGATAGCTTGCGACAAGCATCGAGCAGGTCAAACATCTTTGGAGTGCGACGATAACTGCCAAGCCGAACGCGTCAAGGCTGAAGCTTTGGAGCAGGAGAACTTGGATCGACGCATGCGTTGGGTGGAAGAAAGGAATCAAAGAGAGCTAGAAAGATTCAAGCAACTGTTTGCCAAACGAAAGCCCAAGGAACGCAAAGCAATTGATGTGCCAACGACCAAATCCAACATTGACTGGAAACGTTGTGCCATCTATGCCGTGGCACTCTTTGCGGCACTTGGCGCTCTAGCTGTAGCTTACTATGCCGAAAGCTAA
Protein Sequence: MEKFNKAQAKNLAAAKKLVDTYASSSEDEGELDEKHILDLLYKHYKPSPDNSSTSNNANRTATFLENSLHSGAATCLICIGSIRRVEGIWSCKSCYCFFHLKCIQRWANDSVMQMKVKAEQQNGSQGHYNHLGEFVPPKRPKSLHWCCPQCRTDYQPADRPTQYECFCGKEVNPQAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSACLCGKSAPRSVRCIDKNWQCQQTCQSLLSCGKHKCNQRCHRSGQCPPCSSKSSQYCDCKREQKVVNCADPKWKCKNICGALFDCGLHSCDKVCHAGPCGGECPLGVRSCPCGKSVKTGGCSEVLETCGDTCQKVLSCGKHSCAQRCHRGPCNLCLVRTTKKCRCGLHEKELPCSKDFTCETKCKLIRDCNKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRISAKCHHAIKHRCHKGECPPCAQQCGLPNDISGCGHICKVRCHAAIRVPKPADAVRPHANKYEYRAQPHPRCEEGISVTCIGGHEIATWPCWNSKPQSCARKCGRQLKCGNHKCQLFCHAVPNLVDMQQQMGCSNCEQGCAIARPAGCTHACAKGCHPPPCAPCSFVIKNKCHCGXXXXXXXXXXXXXQEGSVQDILDRRQKLCSCGNRCLKNFACGHRCMTICHPGPCPNPDMCRKKVKIYCACKRIKLEIACDKHRAGQTSLECDDNCQAERVKAEALEQENLDRRMRWVEERNQRELERFKQLFAKRKPKERKAIDVPTTKSNIDWKRCAIYAVALFAALGALAVAYYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01324578;
90% Identity: iTF_01323792;
80% Identity: -