Basic Information

Insect: Scaptomyza pallida
Gene Symbol: ZNF212
Assembly: GCA_018152965.1
Location: JAECXP010000153.1:523923-526195[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.94 70 4.2 0.2 1 12 41 52 41 57 0.84

2 11 6.2 4.6e+02 1.7 2.5 1 19 143 161 143 163 0.89

3 11 0.0026 0.19 12.3 3.8 3 23 205 225 203 225 0.97

4 11 0.00083 0.061 13.8 1.5 1 23 251 272 251 272 0.97

5 11 0.00067 0.049 14.2 0.5 1 23 278 300 278 300 0.98

6 11 0.00051 0.038 14.5 0.4 1 23 327 349 327 349 0.97

7 11 8e-08 5.9e-06 26.5 0.9 1 23 355 377 355 377 0.99

8 11 0.0023 0.17 12.4 6.6 1 23 383 405 383 405 0.98

9 11 6.1e-06 0.00045 20.6 0.4 1 23 411 433 411 433 0.98

10 11 3e-05 0.0022 18.4 0.1 1 23 437 459 437 459 0.99

11 11 0.0059 0.43 11.2 0.0 3 23 480 501 478 501 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.94	70	4.2	0.2	1	12	41	52	41	57	0.84
2	11	6.2	4.6e+02	1.7	2.5	1	19	143	161	143	163	0.89
3	11	0.0026	0.19	12.3	3.8	3	23	205	225	203	225	0.97
4	11	0.00083	0.061	13.8	1.5	1	23	251	272	251	272	0.97
5	11	0.00067	0.049	14.2	0.5	1	23	278	300	278	300	0.98
6	11	0.00051	0.038	14.5	0.4	1	23	327	349	327	349	0.97
7	11	8e-08	5.9e-06	26.5	0.9	1	23	355	377	355	377	0.99
8	11	0.0023	0.17	12.4	6.6	1	23	383	405	383	405	0.98
9	11	6.1e-06	0.00045	20.6	0.4	1	23	411	433	411	433	0.98
10	11	3e-05	0.0022	18.4	0.1	1	23	437	459	437	459	0.99
11	11	0.0059	0.43	11.2	0.0	3	23	480	501	478	501	0.95

Sequence Information

Coding Sequence: ATGTCAGCACAGCGTGGAAAGAAGTCAGAGACAACAACAACAACATTGCAATCGCACGTGGATGATAAAAAACAAAGCAATGTTGATCATTTTATAATAGATACGTGTGCGGATGAATTATACTATTGCGAGGACTGTGGCAATGATTTCGACACCATCGAAGCATACAATGATGCACACATGGGTCCCGATTGCTGCTCCGGCACCGTAGAGGCACGCTCAAAAGTCACAGTTCATGCTGTCGAAATAAAAGATGATGTCGATTACGATGTGGATGTTGATTCACTTGTCGTCGAGGACGATCTGATCGAGGAGCTCGATGATGATGCCAGCGAACCCCAACAATGGGACGTCCTCGACGATATGGAAATGCTTGATAACGAAACGGAAGCGGGGGTAGAGGGTGCGCCTAGCAAATCGGAACGTTACTTTTGCTTCGATTGCCACAGCATATTCGAGACACGTGAGAGCGCCGAGGAGCACAGCTGTCCACAAGCAGATGCATCGTCTGGCAAACAAAACAATGCCAACAAATTGGCCAAAACGCAAACGCCAATGCGACGCAAAGTGGCAACTGACTCAGCGGCAAGCGGCAGCAATGCCACCACAATATGCAACATTTGCAAAACGAAATTCAGCTCGGCCAAATGTCTAAAGTTCCACATGCGCATTCACAACGAACGGCCCTCCAAATCCATACAGGACGCCTTGCCCGTGGGCGCACATCAGCAGTACAGCGAATTGGATCAGTTCTATTGTGAAATCTGCAAAAAGAGCTTTGAGCAAAATCTGTTGACGGTGCACAAACAGATGCATCAGAGCACCAAACAGTACTCATGCGGCACATGCAATCGCAAGTTTGATAATCTTATAGAGTATGAGATGCATCTGAAGATCCATGATCGTCAAGCTTTAAACAACAACAGCAATAACAATCCAACGAAAAAGTCTGCCAATACGAAAAGGGATAAGCCCGGTTTTGCCTGCCAATATTGTGAGCGCGTATTTATGCGTCCCTACGAGAAGGTCAAACATGAACGCGTTCATACCGGCGAAAAGCCCTACAGCTGTGAGGTGTGTGGCAAAACGTTTCGTGTCTCCTACTCTCTGACCTTGCACCTGCGTACGCATACAAACATACGACCATATGTGTGTACCACATGCAACAAGCGCTTTAAATCGCATACGGTGTATTCGCATCATTTGCGCATTCACAGCTCAGAGCGGGAATATGTTTGTGATAGCTGCCCGAAAGCCTTTCGCACATCCGTACAGCTCTATGCACATAAGAATACTCACACCAAACCGTATCAATGTGCCGTCTGCAATCGCCCCTTTGCCTCCCTCTATGCCGTCAAGGTGCACATGTCCACGCACAAGCAAAACGATGCCAAAGGCAAGGAGTCTGGCAAAAGTCAGACATCGAATAAATATTGGTGTGTTACCTGCGGTGCGGAGTATGCGCGTCCCTTTGCCTTGCGTCTGCATATGAAGGCTGCACATGGACAGACCGATGATGGGACACGTATTGCGAAGATTCCACCCGCCGAAGATGATGATGATATTGATGATGATGAAATTATTGTGCCAGATACGGAGACAGCGGTGCTTATAGCAGCGGCCAAAGCAGATTCATCGTATCTAAGTGATACGACCGATGAAGTGGACATAATGGGCGCGGTGCCCAAGTACGAGGAATGCATCGAAGTATCAGCAGATGCGTTCGATGTGGAGACTTATCAAAACGAGGAAATTATTACCGATTGGATGAAGTAA
Protein Sequence: MSAQRGKKSETTTTTLQSHVDDKKQSNVDHFIIDTCADELYYCEDCGNDFDTIEAYNDAHMGPDCCSGTVEARSKVTVHAVEIKDDVDYDVDVDSLVVEDDLIEELDDDASEPQQWDVLDDMEMLDNETEAGVEGAPSKSERYFCFDCHSIFETRESAEEHSCPQADASSGKQNNANKLAKTQTPMRRKVATDSAASGSNATTICNICKTKFSSAKCLKFHMRIHNERPSKSIQDALPVGAHQQYSELDQFYCEICKKSFEQNLLTVHKQMHQSTKQYSCGTCNRKFDNLIEYEMHLKIHDRQALNNNSNNNPTKKSANTKRDKPGFACQYCERVFMRPYEKVKHERVHTGEKPYSCEVCGKTFRVSYSLTLHLRTHTNIRPYVCTTCNKRFKSHTVYSHHLRIHSSEREYVCDSCPKAFRTSVQLYAHKNTHTKPYQCAVCNRPFASLYAVKVHMSTHKQNDAKGKESGKSQTSNKYWCVTCGAEYARPFALRLHMKAAHGQTDDGTRIAKIPPAEDDDDIDDDEIIVPDTETAVLIAAAKADSSYLSDTTDEVDIMGAVPKYEECIEVSADAFDVETYQNEEIITDWMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01320614;
90% Identity: -
80% Identity: -