Spal014480.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- CDC5
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000004.1:5643500-5645730[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-10 4e-07 30.1 0.0 1 39 228 267 228 274 0.91 2 4 3.5e-06 0.0046 17.1 0.0 3 42 285 328 284 332 0.89 3 4 5.3e-06 0.007 16.5 0.0 3 46 340 384 338 384 0.90 4 4 2.8e-10 3.6e-07 30.2 0.1 2 43 391 433 390 436 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATCTGTTCAAAAAAGGCCAGGAGCACCAAAAACAATTGCAGGAAATATCAACGCTTCTATCAGCCACTGCTCGAGGCGATGTGGACGCTCTTAAACTTAATCAGGCGCTTCAACAATACCTTGAACAGTTCCGCCAACAAACGCTGCAACTACTGCATAAAGTGCGAGCGCGCTATAAACGTAATGAAGAGATACTAATAAGTCGACAAAGGTCGCGCTTTGATGGCAATGAAGTCGTAGGAATGTGCGGGGCTGTGCTCCGCGGCGGAACCTTTCGGTTCAAGGGTAATTTATACTTTCGTGATGCAGACGGACGGAGTTGTCCCAATAATGAGGACTACATGAGGCGCAGCAGCACCGAAATGTTTCCCACCGATTTTGATATGCGCTCCAAACATGTCTGGACGGTGCTGGACAAGAAAAACATCGTTATGGGCGTTAAACAACAGCTTTTGGATCATGCCAGCTTCAGACGACAAAGCATCCCAAGAGGCAGAGGGCGCAAACGCAAGGTCATCGATCTGTACCAGCATTCAGTGGCTGAACTGCTTAGTAATGCGGATAGCAGCTTTTCCATTGACTGGAATCAAATAAGCACCCTGGACGTTGAATATCGTCATTCAGCCTACAGTTGTGAGGCCATGTGGCTTGTGTACTTACAGCCCCACATAAAACGAGATGACTGGACACCCGGGGAGGATCAGATTTTGCTAGCAGCCGCCAGGGCAAATAATATGCAAAACTGGACAGCCATTGCGTCTAAAGTGGCAGGACGATCCGATTATCAGTGCTTCGTGCGCGTGCAGACAACGCTGCGCAACAGTCTGGATTTAGCGCCTGCCGCAAAATGGAGCTACCAGGACAGCGAACGTTTGTGTGCACTTGTTTTGAAGAATACGGTAAACGGCGTTGTGAACTGGTCCGAAGTGTCTGAACATTTTCCAAACAGATCTCGTTCTACAATAATTGGTCGCTATGTTTATAGCCTGAACCCCGATATCAGTCACGCCCCTTTCACTGCGGCAGAAGATGTAATGCTGTTTGCAGCTGTTAAGGAATATGATGGCAAGTTCAATTGCTTTCCGCGCACGCTATTTCCTAATCGATCGTTGGCCCAGCTGCGCAGCCGATATAAAAATGTGCTGGCTGTGCGTAACAAAACAGAGTCCTGGTCTGTGAAGGATGACGAAAATCTAATGGCTTTCGTTACCAAACATGGCACCTCGCAGTGGGTGAACTGTGCCAAATATTTGGGCAATCACACTCGTACCAGCTGTCGCACACGCTTTTTGGTCATTAAAAAGTTTCTGGAGAAGAATCCAAATTCAACGGAAGCGGATATACCACGTCGCAAAGCCCGTAAAAACGAAGCTATTAGCTCTGATAATTGGGAGCTATGTCTCCAACAATTGCAAGAAGATCCAGATGCAGAGCTTTTGAGCCAAAACTCAAATGAGTCGTTGGTGGACATTAAATGTGAACGTGAAGAAAAGTGGGATATACGTTCGCTAGAACAAAAGAGAATTAACAGCACAGACCAAACCGTTTATGAGTATTTAATGTACGCCTATAATCTCAACTTGCGCACACCTGCTTTGCCAATACCACTTCCTCAAAACCCGAATAATCTACAAGCTGTGGCTTATGCGCTACGTTTTCAGCCAGACGGTCAAAAACGCATAATCATAAGAAGTTTTTGCCTACCCAAGACGCTGAACATCTGCTGTAATAAAATGCTGCGCAAAATGCCACCGTGTGAGGATGTTCGGATGGCGACGAAATATCTGCAGCCAAATTGGTCCACAATGATGGGATTTCGGGCCATGTGCATATTGTCAATGCGGACACCAGTTATCTCCAATGATGAATCGCAGCCTGAAGACGATAATCATGAATCTCAGCCAGAATTGCAGCTGTTTCGACATCGTTTACGCACACTCTTCTATCGCACCACTTTGTTGAGCCGCTTGGAGGTCGCAACATTTGAGGATCTGCCAAATGTGTTGATGAAACTGCCAAGGTCTATTGATAATGACGTCTTGGTAAGCACTTCAGAGACAGATGATGACAAAAAAGAAATCAAACACACTCACGATAACGCATGA
- Protein Sequence
- MCDLFKKGQEHQKQLQEISTLLSATARGDVDALKLNQALQQYLEQFRQQTLQLLHKVRARYKRNEEILISRQRSRFDGNEVVGMCGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYMRRSSTEMFPTDFDMRSKHVWTVLDKKNIVMGVKQQLLDHASFRRQSIPRGRGRKRKVIDLYQHSVAELLSNADSSFSIDWNQISTLDVEYRHSAYSCEAMWLVYLQPHIKRDDWTPGEDQILLAAARANNMQNWTAIASKVAGRSDYQCFVRVQTTLRNSLDLAPAAKWSYQDSERLCALVLKNTVNGVVNWSEVSEHFPNRSRSTIIGRYVYSLNPDISHAPFTAAEDVMLFAAVKEYDGKFNCFPRTLFPNRSLAQLRSRYKNVLAVRNKTESWSVKDDENLMAFVTKHGTSQWVNCAKYLGNHTRTSCRTRFLVIKKFLEKNPNSTEADIPRRKARKNEAISSDNWELCLQQLQEDPDAELLSQNSNESLVDIKCEREEKWDIRSLEQKRINSTDQTVYEYLMYAYNLNLRTPALPIPLPQNPNNLQAVAYALRFQPDGQKRIIIRSFCLPKTLNICCNKMLRKMPPCEDVRMATKYLQPNWSTMMGFRAMCILSMRTPVISNDESQPEDDNHESQPELQLFRHRLRTLFYRTTLLSRLEVATFEDLPNVLMKLPRSIDNDVLVSTSETDDDKKEIKHTHDNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -