Basic Information

Insect: Scaptomyza pallida
Gene Symbol: lov
Assembly: GCA_018152965.1
Location: JAECXP010000255.1:1475308-1484833[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.5e-19 2e-15 56.3 0.0 1 44 844 887 844 888 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.5e-19	2e-15	56.3	0.0	1	44	844	887	844	888	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGAGGAGCTGATAAAACGTTGCAAACTGACGTCTTTGCCGCTGGCGTTGCATATGAACGATTACGGCCGCCAGCTAACGCCTTCGACGCCATCGATGCATACGACACCGCCCACAACGCCGCCCACGCCGCCACCGCTGCCACTGAACATGAGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACCTGCCACGCCCACGACGGTCAGTGCACCCACGCAGGATCATTATAGTCTGCGCTGGAACAACCATCAGAATCACATCCTGCGCGCCTTCGATGCCCTGCTGCAGACCAAGACCCTGGTGGATGTGACATTGGTGTGTGCCGAGACCTCGATACGTGCCCACAAAATGGTCCTCTCCGCCTGCTCGCCCTTCTTTCAGCGCGTCTTTGCCGAGACGCCCTGCAAGCATCCCGTCATTGTCCTCAAGGACTTTCGTGGTTGGGTGGTGCAGGCGATTGTTGATTTCATGTATCGTGGCGAGATTAGTGTACCCCAGCACCGTCTCCAGACTCTGATCCAGGCAGGAGAATCCCTGCAGGTCCGTGGCTTGGTAGAGAGCTCCGTTCCGGAACATACTCCAACGCCAGCTGCCTCACCCGACGATTTTAATCTGCTGGATGCCTCGCTGCTCTCCTCCAGCTTTGAGGATGAGTCGCCCTCAATGGTTAGACCCTCAACCGGCAAGCTCATAATGCCCTCCCGACTCTTTGGCAACGCGTCAAGCACAATGGCAGCGATAAGTATGCGACGCAAGCGGGAGCAGGAGTGTGAACGTGAGCCGGAGAGCGATCAGGAGTTAGGGGGAAGCTCACCCATGCCAAGGCGCAAGCAGGCGCGTCCCAGGCGACGCTCAGGTGATATGCCTCACGACTTTGCGCTGAACAAACCGGAGACGACGTCAGCGGAGACACCACAAACCACTGTGATCAAGCATGAGCTGCTGGACGACCAGGAGCCGGAGCCAGAGCCGGAACAAAGCGATAAGCAGCGATCCGAAGGGGAGGACGAGAGTATTCCTATGGATCTGGATGAGCAGCAGTCACAGGAAACCCATGAGAACGAAGACGCCGGCGGAGCAACCGAAGTTGACCTTACCGATCGAACGGATCACAGGGAGCAACAGGAACAAGAGCACGCATTACCCCTTGTTACTCCCAGCAATCCAAGCAATCAGCAGACGGAGCAGGAGCTGGATGAAGAGGACGATGAGGATGAGCGAGAGCAAGATCCTGATCAGGAGCTAGAAAACGAGCTCGATCAAGAAGACCTCGATCACGATCCGGATGAGGACGAAGAGGAACAAGACATTGAGGAGCTTATACACACCACAAACGAATTGCGACGTCAGGCGGCAGTCGCTGCTGCCAATGCGGCTGCCATGTCGCCCTGTCCCAGTGATGGGCCCGAGGATCTGTGCACCACCAAAAAGGATAAGGATACCAGTGGCCATTCCCATTCCTCCGATAATGAGAGCAACAATAACAATAGCAGTAAACTGCAGGACAACAATCAACGCATCATGTTGTCCCTCAAGGACATTCGACAGCTGAACGCCAAGCCCAGTGCGACCTCCACGCCCACCCACACGCCCAACAGCTGTGCACCGGGCAGCAATGGTCTCTTATCCTTTCCCCCACCTGGCTTACGTCCACCCGGCATGCCCGACAGTCCGCCCTGCCACATGGAGGCGCTCGAAGCGCAAATGCATGCTGCAGCTGCTGCTGCCGTGGCAGCTGCAGGTGCCGGCGAGAATCCGTTCCATCACATGGAGCATCAAATGGAAATGTCGCTGGCGGCAGCAGCTGCAGCTGCGGCCATGCATCAGCGGGAGCCACGTGATCCCAGGGAGACGCGAGAGCAGGCAATGCAGCGGGAGCACAATGCATTCGCCAGTAATCTGTTGGGTCCCATGGGTCTGCCACCCTTTCATGGACATAATGGCTCTATGCCGGGTGGCGGATGTCCGGGTCAGGCGCCGCATGAGCGGCTGGAGGAGAGCATGAATCGTCTGAGCAAAGAGTTTGGCAAGGAGTTCGGCAAGGATTTTGGCAAAGACTTTGGCAAGGACTTCGGCAAGGACTTTGGCAAAGATTTCTGCAAGGAGTTTGCGCCCACATCACCCATGAGCCTGCCCGGTCACTACAATCCGCAGGACGGACAGCAACATCCGCCGTCGCCGCTGCCCTTTCCCGGTATGTCCTCGGCGTTGACGCTGACGCCGCCGCACATGTTTGGCCTGGACTCGCCACTTGGCTTATTTCCGCCCGGCATTGATCCTGGCAAACTCTACAATCCGCTAATGGAAATGAGCGATCCACGCGATATGCCCGGCGGACCGCCACCGTTTCTCAAAAAGAAAATGCCACGCCCCAAGGGACAGCATTCGGCGCCGCGAGGAGGTCCACCACGGTCCTGGACCAACACAGAGCTAACGGAGGCACTGCAGCATGTGTGGAACAAGAAGATGACCACATCGCAGGCATCGCGCATCTTTGGCATACCCTACAACTCCCTGCTGATGTATGTGAGGGGCAAGTATGGCAAGAGTCTGAAGCTGGAGCAGCTGCGCAAGGATTGCATTAGTGGTCCGCCCATTGAGATGCTACAGATGGGCATCAGTGGTGGTGGAGGCGGTGGCTCCAAGGGCGAGAAGAAGGAACGCAAGGAGAAGGACAAGGACAAGAATTCCTCATCGAACAACTCCAGCTCGGGCAACAACAATAGCTCCAATCCCAACTCATCCCAAATGCCACATCCAGGCGATTTGGGTTCATTGGGTCCACTTGATCTGGAGCTAGGACTACCACTGGGTCCACCTGCGGGACCACGCAGTGGCAGCTCAGAGCCCGATCTGCTGGGCGGACCTGGAGCACTCTTCAACCCATTCAATCCACAGGGCTTCTATCCGGACTTTGCCGGCGGCTTTCCGGGTCTACCGCTCAGCATGCTGAACCTGCTGCCGCCGGCGGAACGTCATCATGCCGCTGTGGCCATGCATCATCTGGGTGTGAGCATGGATGAAGACTGCAAGTCCGTTGGCTCCAAGCAATCCTCCTCCCTGGACGATGACTTCACGGGCCTGCCACTCTCCCTGGAGCAGCGACGGCACAGCGAGCTCTCGAGCAATGGAGGAGCGCCGACGTTGGCCCAGGCGAATGGTGGGGGGTCGGGGCAGGATTGA
Protein Sequence: MLKDAEELIKRCKLTSLPLALHMNDYGRQLTPSTPSMHTTPPTTPPTPPPLPLNMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPATPTTVSAPTQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQHRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFNLLDASLLSSSFEDESPSMVRPSTGKLIMPSRLFGNASSTMAAISMRRKREQECEREPESDQELGGSSPMPRRKQARPRRRSGDMPHDFALNKPETTSAETPQTTVIKHELLDDQEPEPEPEQSDKQRSEGEDESIPMDLDEQQSQETHENEDAGGATEVDLTDRTDHREQQEQEHALPLVTPSNPSNQQTEQELDEEDDEDEREQDPDQELENELDQEDLDHDPDEDEEEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKDTSGHSHSSDNESNNNNSSKLQDNNQRIMLSLKDIRQLNAKPSATSTPTHTPNSCAPGSNGLLSFPPPGLRPPGMPDSPPCHMEALEAQMHAAAAAAVAAAGAGENPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRETREQAMQREHNAFASNLLGPMGLPPFHGHNGSMPGGGCPGQAPHERLEESMNRLSKEFGKEFGKDFGKDFGKDFGKDFGKDFCKEFAPTSPMSLPGHYNPQDGQQHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGSKGEKKERKEKDKDKNSSSNNSSSGNNNSSNPNSSQMPHPGDLGSLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPGALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDDFTGLPLSLEQRRHSELSSNGGAPTLAQANGGGSGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01325009;
90% Identity: iTF_01325009;
80% Identity: iTF_01325009;