Spal015529.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- kn
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000255.1:2667497-2673771[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-43 4.5e-39 134.3 0.0 39 121 55 137 31 147 0.95
Sequence Information
- Coding Sequence
- ATGGAATGGGGCAGGAAGCTGTATCCCACCGCTGGTCCCCGATCCGCCGGTGGCCTCATGTTCAGTCTGCCACCCACCGCAGCGGATATGAATCAGCCCCGGGGTCCAATGACATCGCTCAAAGAGGAACCCCTTGGCGGCCGATGGGCAATGCAACCAGTTGTGGATCAAAGCAATTTGGGCATTGGCCGGGCTCATTTTGAGAAACAGCCGCCCAGCAATTTGCGTAAATCGAACTTCTTTCATTTTGTGATTGCGCTCTATGATCGTGCCGGCCAGCCCATCGAAATCGAGCGTACAGCGTTCATTGGTTTCATCGAAAAGGATTCGGAATCGGATGCAACAAAAACAAACAATGGCATACAATATCGATTGCAATTGCTGTATGCGAATGGCGCCCGACAGGAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTCAGAATAAACATATTAATATATATCGGAAAAAATCTAAAGACCTTTTTTTAA
- Protein Sequence
- MEWGRKLYPTAGPRSAGGLMFSLPPTAADMNQPRGPMTSLKEEPLGGRWAMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEXXXXXXXXXXXXXXXSFRINILIYIGKNLKTFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00804971;
- 80% Identity
- -