Spal015530.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- kn
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000255.1:2698492-2701083[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-118 7.7e-114 381.1 0.0 205 384 1 208 1 212 0.99 2 2 4.7e-07 0.0043 15.4 17.2 424 542 215 332 208 335 0.64
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTCGTCATTTCCACCCAAGTTCAAGTTGATGGACCACTTCTGGCTATCTCTGATAATATGTTTGTGCATAATAATTCGAAGCATGGTAGACGAGCAAAACGTTTGGACACTACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCGCTGCCTGTGGCGACACCCTGTATCAAAGCGATATCACCGAGCGAGGGCTGGACAACAGGTGGCGCCACCGTCATAATTGTGGGTGATAACTTCTTTGATGGCCTACAAGTCGTCTTTGGCACAATGCTTGTGTGGAGCGAACTAATAACATCGCATGCGATAAGGGTACAAACGCCGCCCAGACATATACCGGGGGTGGTGGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGGCAGATTTGTGTATCAGCACTCAATGAACCCACAATCGACTATGGTTTCCAGCGTCTGCAGAAGCTCATACCCCGACATCCCGGCGATCCGGAGAAACTGCAAAAGGAGATCATACTGAAACGTGCAGCGGATCTGGTCGAGGCCCTGTACTCCATGCCCAGCAGATCACCCGGCGGCTCCACCAGTTTCAACTCGTATGCGGGCCAACTCGCTGTCAGTGTACAGGATGGCTCGGGCCAATGGACCGAGGATGATTATCAGCGTGCCCAATCGAGCAGCGTGAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCCACGCCCCACAGTTCGGGCGGCTCGTATGGGGCAACGGCTACGACAGCGAGCGTGGCAGCCACGGCGAATGGTTATGCGCCAGCACCGAATATGGGTACACTATCCTCATCCCCAGGCAGCGTTTTCAACTCCACATCAAGAGTCAGCAGCTTGAGCTTTAATCCATTTGCCCTGCCCACCTGCAACACACAGGGCTATAGTACCAGTCAATTGGTGACATCGACCAAATAA
- Protein Sequence
- MRRFQVVISTQVQVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGQICVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAATANGYAPAPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGYSTSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00614649;
- 80% Identity
- iTF_01324638;