Spal003401.1
Basic Information
- Insect
- Scaptomyza pallida
- Gene Symbol
- grh
- Assembly
- GCA_018152965.1
- Location
- JAECXP010000153.1:2654988-2686201[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-63 2e-59 200.6 0.5 24 221 543 735 529 737 0.94
Sequence Information
- Coding Sequence
- ATGCAGGATGCAACGAGCAGTTATGCCATCTCCTATACGGACTGGATAACGGAGTCACGTCGCTATAGCCTGGATCAGCCGCCCCCACCGCCGCCATCGCACCTGCAACAGCTGGAGCTGCCACAACAACAACAACATCAACAACATCATCATCATCATCTTCATCATCATTATGGTAGTCAATCGCCACCGCATTACACATATGTGCCACAAAAGGATGCAGCACAGTCAGTGCAACATCTGCCACTTACTGCCGCTGGGCTCATGCAATCGATTGCTGCCGACATCCAACTAAGTGAACAACATTCGACACCACCACCCGCACCACTTGCAACACACCCACCGCAGGCACACGCCTCCAATGCCAGCTATGCTGTCTACAGCTATTACCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTGTGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCGCAAAATGAAATTCAAGGCTTTCTGCTTGATCTGAGCAAGGATCCCAAGAATGGCAATCTGAACGCCTCGGCAAACGGTGGCGGTTCCGTCATAACGCAAAAGATATATCGCGTGGATGCAGCTAGAACTGAAGTTGAGGCAACTGCAACAATAAGTGGCGCAAGAGCTGCTGCAAGAACAAGTGAAACTGCAACTAGTCCCGCCAGAGCCACAACCAATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGCAGAACGGCAGCAATGGCAACAACAACAGCACACAGCAGAGCTCACTGCAAGCCCAAAGTCCCAGTCCCGGGCCGTACATCACAACGGATAGTTATGGCATGTACACCGCAACGCGGCTGCCGCCCGGCCCACCACCCGCCACCACATTCATAACGGAACCCTATTACCGCGAATACTTTACGCCCGATGGCCAGGGCGGCTATGTGCCCGCCGGCACAGCGCGCAGTCTCTATGGCGAGGATGTATCCGTTTCGGCAGCCGCACAGCCACAGCCCGTGGGTGGCGTGTATGAGGCACGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCCAAGGCTATAACGGCGGCGGGTTTGACCGTCGATTTGCCTAGTCCCGATTCTGGTATTGGCACCGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGATTATACGGAACTTTGTCAGCCGGGTAGCTTAATTGATGCCAATGGCAGCATACCCGTTTCGGTTAATAGCATCCAGCAGCGCACTGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCACTGGTGGATACGAGCACAAACGGTTCGACACGTTCAAGACCCTGGCACGACTTTGGACGCCAAAATGATGCTGACAAAATACAAATACCAAAAATCTTCACAAATGTGGGCTTTCGCTATAACTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATAACGCTTGAATATGTGCACGATGCGGATAAGCCAATCAAGAATACAACGGTTAAGAGTGTGATCATGTTAATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAATGTTTAAGCACGGATTTTAGCAGTCAAAAGGGTGTTAAGGGTCTGCCGTTGCACGTACAGATCGATACGTTTGAGGATCCTCGGGATGCGACAGTCTTTCATCGTGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGATGAGGAGCGTCGTGCTGCCAAGCGTAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTCACAGATCGTTCCGAATTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTTTTCTCACCCGCTGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGATTCGCCGGAACTAAAAGGTGCCTCACCATTCTTGTTGCATGGTCAAAAGGTGGCAACGCCAACGCTCAAATTCCATAATCATTTTCCGCCCGACATGCAGACTGATAAGAAGGATCATATATTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCACCAATGAAACGTGGCCGAATGACGCCACCAACAACGGAACGTGTCATGTTGTATGTGCGGCAAGAGAACGAAGAGGTCTATACGCCGCTCCATGTGGTGCCACCAACCACAATTGGCCTGCTTAATGCGATTGAAAACAAATACAAAATCTCAACAACGAGCATTAATAACATATATCGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGACGACATGATATCGTTCTACTGCAACGAGGATATCTTCTTGCTGGAAGTGCAACAAATCGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAATAG
- Protein Sequence
- MQDATSSYAISYTDWITESRRYSLDQPPPPPPSHLQQLELPQQQQHQQHHHHHLHHHYGSQSPPHYTYVPQKDAAQSVQHLPLTAAGLMQSIAADIQLSEQHSTPPPAPLATHPPQAHASNASYAVYSYYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLDLSKDPKNGNLNASANGGGSVITQKIYRVDAARTEVEATATISGARAAARTSETATSPARATTNLEMYATTGGTQIYLQTSHQQNGSNGNNNSTQQSSLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFTPDGQGGYVPAGTARSLYGEDVSVSAAAQPQPVGGVYEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -