Basic Information

Insect: Scaptomyza montana
Gene Symbol: stc
Assembly: GCA_018904305.1
Location: JAEIGR010000004.1:1258370-1260829[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.97 9.3e+03 -3.1 0.5 15 18 27 30 26 31 0.79

2 16 1.3 1.3e+04 -3.6 1.6 15 19 54 58 53 58 0.81

3 16 0.0099 96 3.2 2.5 4 11 87 94 86 95 0.91

4 16 3.9e-07 0.0037 17.3 15.1 1 19 99 116 99 116 0.94

5 16 0.97 9.4e+03 -3.1 1.1 6 10 142 146 141 146 0.89

6 16 2.9e-08 0.00028 21.0 13.8 1 18 152 169 152 170 0.98

7 16 2 1.9e+04 -5.7 3.9 7 13 174 180 174 181 0.75

8 16 1.3e-09 1.3e-05 25.2 12.9 1 19 210 228 210 228 0.98

9 16 0.76 7.3e+03 -2.8 0.5 5 10 258 263 258 263 0.90

10 16 1.9e-05 0.19 11.9 17.5 4 19 276 291 269 291 0.88

11 16 0.047 4.5e+02 1.1 11.9 1 11 331 341 331 353 0.79

12 16 3.1e-10 3e-06 27.2 15.5 1 18 358 375 358 376 0.97

13 16 1.2 1.2e+04 -3.5 1.1 6 10 405 409 403 409 0.72

14 16 2 1.9e+04 -6.0 8.5 9 18 422 432 413 433 0.78

15 16 8.3e-09 8e-05 22.7 12.2 1 16 469 484 469 492 0.95

16 16 1.2e-07 0.0012 18.9 12.9 1 19 502 521 502 521 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.97	9.3e+03	-3.1	0.5	15	18	27	30	26	31	0.79
2	16	1.3	1.3e+04	-3.6	1.6	15	19	54	58	53	58	0.81
3	16	0.0099	96	3.2	2.5	4	11	87	94	86	95	0.91
4	16	3.9e-07	0.0037	17.3	15.1	1	19	99	116	99	116	0.94
5	16	0.97	9.4e+03	-3.1	1.1	6	10	142	146	141	146	0.89
6	16	2.9e-08	0.00028	21.0	13.8	1	18	152	169	152	170	0.98
7	16	2	1.9e+04	-5.7	3.9	7	13	174	180	174	181	0.75
8	16	1.3e-09	1.3e-05	25.2	12.9	1	19	210	228	210	228	0.98
9	16	0.76	7.3e+03	-2.8	0.5	5	10	258	263	258	263	0.90
10	16	1.9e-05	0.19	11.9	17.5	4	19	276	291	269	291	0.88
11	16	0.047	4.5e+02	1.1	11.9	1	11	331	341	331	353	0.79
12	16	3.1e-10	3e-06	27.2	15.5	1	18	358	375	358	376	0.97
13	16	1.2	1.2e+04	-3.5	1.1	6	10	405	409	403	409	0.72
14	16	2	1.9e+04	-6.0	8.5	9	18	422	432	413	433	0.78
15	16	8.3e-09	8e-05	22.7	12.2	1	16	469	484	469	492	0.95
16	16	1.2e-07	0.0012	18.9	12.9	1	19	502	521	502	521	0.97

Sequence Information

Coding Sequence: ATGCGTGACATTGAACAGCGACGTCTCGAGTGCTTGGTGTGTGTGGAGCAGATCAAAGCACATCATGGCACCTGGTCCTGTCAGAACTGCTATCATGTGCTGCATTTGAAATGCACCATTACGTGGGCAAGTAGCTCCAAGTCAGCAGAGGGTTGGCGCTGTCCCGCCTGCCAGAACGTGCTGGAAGAGGTGCCACATGAATACTACTGCTTTTGCGGCAAGCTCAAGAATCCACCATTATCGCGCAATGAGCTAGCCCATACCTGCGGCGAACTATGCTGCCGGGTGGAGGGATGCAGTCATGCCTGCACGCTGCTTTGTCATCCGGGTCCTTGTCCGCCTTGCCAGGCAAATGTGAGTCGCAGCTGCGGCTGTGCACGCACCACCAAGATTATGCAGTGCGCCATGAAACAGCAGCTCCAATGCGAGTCCATCTGCGATAAGTTGCTCAACTGCAGCGAGCACCGCTGCCAGCAGCTCTGCCATGCGGGCAAATGTGAGCCATGTGGCGAGCAGGTGGAGCAACACTGCCACTGTGGCAAGCAGCAGCGCGAGGTGCTGTGCACCAAGGAGACTCAGGACAAGCGCAGTTACTCGTGCAAGGAGTGCTGCAGCAGACCGCTGCCGTGCGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCACAGCAGATCACAAGTTGCCCCTGCGGCAAGCTGCCTGTGCAGCCCGCACAGCGCACCAGCTGCCTCGATCCAGTGCCCACCTGCGAGGGTGTCTGCGGCAAGACTTTGCGCTGCGGCAAACCCGCCCATCCGCATCAATGCACCAGCAAATGCCACTTGGGCCAGTGTCCTCCATGTCCCAAGCAGACGGCTGTCAAGTGTCGTTGCGGTCATATGGATCAGTTAATCAAGTGCCGGCAGCTGTCAACACGCGCAGATGATGCACGCTGCAAGCGTCGCTGCACTAAGAAGCGCAGCTGTGGCAAACACAAATGCAACGCGGAATGCTGCATCGATATCGATCATGCCTGCCCGCTGCCCTGCAATCGAACGTTGAGCTGTGGCAAACACAAATGCGATCAGCCGTGTCATCGCGGCAATTGTCCGCCTTGCTATCGCAGCAGCTTTGAGGAGCTGTACTGCGAGTGCGGTGCAGAGGTTATCTATCCACCTGTGCCATGTGGCACCAAGCGTCCACCCTGTAAGCGTACCTGTTCGCGCACCCATGGCTGCGATCATGTGCCACAACATAGTTGCCATGCGGCTGCCATCTGTCCGCCCTGCATGATGTTCACGACCAAGTGGTGTCATGGCAATCATGAGCAGCGCAAAACTATACCCTGCTCGCAAGAGAGCTTCAGCTGTGGCTTCGCATGCGGCAAGGCGCTAGCCTGCGGTCGCCATAAGTGCATTCGGCCCTGTCACGAGGGAGACTGTCCACAGCAGCCGGGCGAATTGTGCCGTCAGAGCTGCACCAAGCCGCGTTTGCTGTGCGGCCATAAGTGTGCCGCCGCCTGCCACGAGGGCGACTGTCCGGATACACCGTGCAAGGAGCTTGTCGAGGTGCAGTGCGAGTGTGGTAATCGCAAGCAGAGTCGCAGCTGCCAGGAACTTGCTCGGGAGCATAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGTGGAAACTATATGGAACTCAGCGAAATACTTGCACCCACCAAAACCAATAAATCCAATAAAACCTTGGACTGCAATGATGAGTGTCGTTTGTTGGAGCGCAATCGTCGCTTGGCTATCGGACTGCAGTCCCGCAATCCGGAGACGCAGCTTAAATCGCTGACCAAATATTCGGAATTTATGCGCGGCTTTGCCAAACGCAATCCGGCACTCACCAAGAGTGTTTACGAAACACTTACCGATTTGGTTAAGTTGGCCAAGGAGAGCAAACAAAAGTCACGCAGTCATTCGTTTCCCACCATGAATCGGGAAAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGCGTAGAGTCCGTATCCTATGACAAGGAGCCCAATCGCAATGTCGTCGCCACAGCACACAAGGAGCGTTGCTGGTTGCCCGCAACAAGCGTTATGGAGGTACTTGCACGCGAATCCGGTCAACGTCGCGTCCCGGTACCGAGCAACAATGCTTGGGGCCTCAAAAAGTAG
Protein Sequence: MRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEEVPHEYYCFCGKLKNPPLSRNELAHTCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCARTTKIMQCAMKQQLQCESICDKLLNCSEHRCQQLCHAGKCEPCGEQVEQHCHCGKQQREVLCTKETQDKRSYSCKECCSRPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLPVQPAQRTSCLDPVPTCEGVCGKTLRCGKPAHPHQCTSKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRTCSRTHGCDHVPQHSCHAAAICPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGFACGKALACGRHKCIRPCHEGDCPQQPGELCRQSCTKPRLLCGHKCAAACHEGDCPDTPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTNKSNKTLDCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFMRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -