Basic Information

Insect: Scaptomyza montana
Gene Symbol: -
Assembly: GCA_018904305.1
Location: JAEIGR010000001.1:444606-448574[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00014 0.01 16.3 0.1 1 23 150 173 150 173 0.96

2 14 0.0015 0.11 13.1 2.9 2 23 222 244 218 244 0.89

3 14 0.0077 0.59 10.8 0.8 1 23 358 381 358 381 0.93

4 14 0.023 1.7 9.3 2.7 2 23 430 452 429 453 0.96

5 14 0.021 1.6 9.4 1.3 1 23 515 538 515 538 0.88

6 14 2 1.6e+02 3.2 0.1 2 14 557 569 556 581 0.85

7 14 0.0007 0.054 14.1 3.3 2 23 589 611 589 611 0.96

8 14 0.0061 0.47 11.1 0.0 1 23 712 735 712 735 0.95

9 14 0.00011 0.0083 16.6 0.2 1 23 779 802 779 802 0.93

10 14 0.0012 0.09 13.4 2.2 2 23 852 874 851 874 0.97

11 14 0.0044 0.33 11.6 2.1 1 23 959 982 959 982 0.91

12 14 0.053 4.1 8.2 1.5 1 21 1034 1054 1034 1055 0.95

13 14 0.078 5.9 7.7 0.3 3 23 1099 1122 1098 1122 0.75

14 14 0.47 36 5.2 0.5 1 23 1140 1164 1140 1164 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00014	0.01	16.3	0.1	1	23	150	173	150	173	0.96
2	14	0.0015	0.11	13.1	2.9	2	23	222	244	218	244	0.89
3	14	0.0077	0.59	10.8	0.8	1	23	358	381	358	381	0.93
4	14	0.023	1.7	9.3	2.7	2	23	430	452	429	453	0.96
5	14	0.021	1.6	9.4	1.3	1	23	515	538	515	538	0.88
6	14	2	1.6e+02	3.2	0.1	2	14	557	569	556	581	0.85
7	14	0.0007	0.054	14.1	3.3	2	23	589	611	589	611	0.96
8	14	0.0061	0.47	11.1	0.0	1	23	712	735	712	735	0.95
9	14	0.00011	0.0083	16.6	0.2	1	23	779	802	779	802	0.93
10	14	0.0012	0.09	13.4	2.2	2	23	852	874	851	874	0.97
11	14	0.0044	0.33	11.6	2.1	1	23	959	982	959	982	0.91
12	14	0.053	4.1	8.2	1.5	1	21	1034	1054	1034	1055	0.95
13	14	0.078	5.9	7.7	0.3	3	23	1099	1122	1098	1122	0.75
14	14	0.47	36	5.2	0.5	1	23	1140	1164	1140	1164	0.83

Sequence Information

Coding Sequence: ATGGAAGGTATGGATCTGTGGACATCTATGTTTTCGGCCGAATATGAAGAGGGTGATTTCGAGCCAAACAGTCATAATTTTGGTGACGAGTTTACGGGCGAAGACGAAGATGCGAATGAGCAAGAGGCGTGTAATAATGATGAAGTCGAAAAAGGACCCGACCCAGATGACGATGCTTTATTTGATTTTGAACTAACACCATCTGTTAGCCTTGTGGAGCCCGATCAAGAATCACCACCTAGACTGTCTACAAGAATGGCGCCGCCAATGCCGGTTGCTTCGCCTGTGCGAGCCCCGCATCATCATCAACCAACGTATGGCTCCTCTTCTTCACTGACGGGGGGAGGTCGCGGTGAAGCCGCCGCCCCATCCACACGACCAACGACATCACAAATTAATGCTATTGACGAGAACGGAGTGCCCATTAATTATGAACTAGGCGTCATTTATATATGCCCCGCCTGCGGTACCGAATACCGACAGCAGGATATGTGGAAACGTCACATGAACCAGATTCATCAGTACAACACACGCCGTGGCCTCAACTTTGTGGCCATCGATAAGCTGTATCATCGATGCATGGAGTGCAACAAGCGCATTGCGATGCACAGTCGCGAGAATCTGCTCAAGCACAAGTTCACCCATTTGCCATATCGTTGCACCAAGTGCTACATCTGCAAGCGGGAGTACAAGTACAGGCAGGACCTAATGGTGCACCTGCGCATGGTACACTGTGACGAGATTGTTGCCATGATGCGTAATAGTGATGTCAGTGCTGGACGCAAAACTCGAGTCCGCTTACCGCGTGTGGAGCAGCGCATTCAAAGTACGGGCCGGTTCTATTCGATCGCCAATGGGCCGGTTCCCGACGATGATGATTGTATAGAGGTCAAAAACGAGCTGATGGATGCGGAAGCAATTACTGCCGATGCAGGTCGTGACGTTAATGACAGTTTAAATTGCAGCTCAAATCAGGTACAGCAAAAGCGTGGTAATACACTTACAGGCGTTAGCAAACCCGATAACGGACTTGGCAGTGGCGCGTCTGATATCTGCGAGGATTATATACATTATATGTGCCCCGATTGCGGCACCGAATGCGACACGCATGCACAGTGGAGCCAGCACATTGAATTCGTCCACGACTATGTCAGTCGACGGGGATTGAACTTCCGTAGCGTTGACATGCAGATGCAGTGCATCGAATGCAAGGAGTTTGTCGCCCCGAATTCTATTAAGACACTGCGTGCGCACAAGTTTAGCCATTTGCCGCAGCCAGATTGGATGCGCTGTAAACTGTGCTATCAGGGATTTACAGAGCATTATGAGCTGGTCGCGCATTTGCTAACTAAGCATCATTTAAACACCTTGATGACCGAAAAGGAGCAGGAGGTGCGGCCTAATGCCACTGTCGGTGATGACGCTGAAGACAACTGCGGCTATGATAATGGTTGCGATGACGAATCCCTTTTGCAATTTGAAGATGGGCCCCGTCGTGGCAGCCGCATTAGCGGCGATGATATGTATGAGACACAGATTGATTATTTGTGCCCGCAGTGCGGCATGGAGTTCATTGAAAAGAAGCACTGGCGCACCCATGTCGTCCATATGCATGGCATGAATGATCTCGCCAAACTGAACTTTGAGGTCGTCAACGATCGTCAGCTTAAGTGCACTGAATGTGACAAGATCATAACGAATGCCTATGGTATACAGAATGCTCAGCAGCACAGGATTACCCATCTACCCTACAAGGCTTATGCGCGCTGTCGCAAATGCCACAAATCCTATACTGATCGCAAGGGGCTGGTCAAGCATTTAGCCACATACCATCGCATCGGCTATGAGCCGCGCAAACCCGGTGCTGGAGGAATGACTGCCAGTGCGGGTCAAAGCCAGATTAAGCCACAAACGCCGCGCAAGCAAATTGTGACTGTTGCCAATGAAACGTACGAGATTACCTATTTGGATGAGGAGCAATCGCCGCCAAGTAATAACAATATTAATGAAGAAAACGATTTTGGCGAGCAAATGCAGGCGGATGATGATGATTATGCAATTGGCTGCAGCAGCACACGCCAGTTGCCACCAGCTGACGCTAGTACCTCTGCATCCAATCCGAATGCGAATCGTTATAAATGCGTTGATTGCGGCTCCTTGTTTGCCTCACTAGCAGCGCTAAAAATACACATAAGCGAGGAACACGATTTTATGGACACACAATATAGTGACAAAAAATGTACAGATGAAACAGCGCTAGCAACAACAACTGAGACCGTCACCTCACCACCGAAAATCTTTTCTGGCGGTTCGACAATCGAACAGAACTATATATTTCTGTGCCCGTCATGTGGCAAGCCCTATAAAACACAATTCGAGTGGCGTCGCCACATCAACGAGGTGCACAACTTTGATAAGCGCCAATCTTTGAATATGCGTCAGCTAGACAAATATCGCTATCAGTGCACACAATGCAAGGATATTGTAAGCAATTCAAAATTAAAAGGACTGCAGGATCATCACTTTCGACATCTGCCTTATAGGCTGTACTTAAAGTGCCTAGTGTGCGGTACCTGCTATAATCACAAGCCAAACATTGCTGCCCATCTACGCACGCGTCACAACATCTGTGAGCGTGGTAAGCCCTGGCGTGATATGCAGCCCAAGCCGCAGAATGGCTCTGAAACCACTAAGTACAAAGATAGGGATATAACAGACAATCCGGATAAGTCCGATTCACCCACGCCTGCCAGCAGCAGCAGCATCAACAGTGGTCGCTCACTAAAACAGCCGGTTGGATTGCGTCCGGCTGGCCTAAATACACTGGAGGATAGCATCTCCTATCACAATGCGGTTGATCTGGACTTTATTACGTATTTTTGCCCCAAATGCAACAAGAACTTTGATTCACACGCGTTCTGGCGCAAACACATTGTCGAGCAGCACAACTTGAACAGTCGGCAGGGCTTGAACTTTCGCCAGATTGACAATCATCACTATTTGTGTTTGGAGTGCTACAAACGGGTGACTGTGACCCACACTAAAGGTGCCATTGGTCAGCTGCAGTCGCACAAGTTTCGGCATCTTCCTTTTCGCTCTTTCAAATGCTTGACCTGCAACGGTGAATTTGTGCGCAAGCAAATGTTTTTCAAGCATCTGAACCGCGACACCAATCGCTGCGATAACAAACCTTTGAGTGAAGAGGATTTCAACGATGACCATCGCTTTGCAGAGCAGTCGGAGGGAGCAGCGTCGGTTAACGAATCAATTGATGCCGCTTCATATCGCCTGCTGTGTCCGCAGTGCGGCGAGAATTTTAGCACCAGCACCAAATCCCTGTGGAGTCGGCATATTAACATTCAACACGGTCTGGGCAAGCGTGAGGCGCTGCACATCCACAAGATAAGCGAAGAGCTGTATCGCTGCACGGATTGCGACGAGCAGCTGCCAACGAAACAATTGCGTGCTTTGCAGGAGCATCGCTTCCGTCATTTGCCCTACGCTGCCTATATACGCTGCAAGCTGTGCGAACAGCAACATCCAGACGATCTCGGTCATGGGCCCGTTGCTGGCGGAGTGCACAGCATGCTTGAGCTGCAGCAACATATGCGCGAAAAGCATCCAGCGTATGCAAAAAGCGATCAGCTAATGCAAGTGCTTGTAGATGCAGATGTAAATGATGATAGTCATCTCTCTGCGGTTGCAAATAACAACGAGCCGTCCGACAGTGAACCGTATATACCAATGCCGGTAGAAATGCTCCTTGACGGGGAAGGAGATAAGGAAATGGCGGCAGCTTGCAATGACTCTTCCGGCAATGGGCGGTATATGCCACTGCCACCACATTTGATGGACGACAACGTTGATGAAACAGAGTTCGAGGACCAATATCTACTGGGCTAA
Protein Sequence: MEGMDLWTSMFSAEYEEGDFEPNSHNFGDEFTGEDEDANEQEACNNDEVEKGPDPDDDALFDFELTPSVSLVEPDQESPPRLSTRMAPPMPVASPVRAPHHHQPTYGSSSSLTGGGRGEAAAPSTRPTTSQINAIDENGVPINYELGVIYICPACGTEYRQQDMWKRHMNQIHQYNTRRGLNFVAIDKLYHRCMECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEIVAMMRNSDVSAGRKTRVRLPRVEQRIQSTGRFYSIANGPVPDDDDCIEVKNELMDAEAITADAGRDVNDSLNCSSNQVQQKRGNTLTGVSKPDNGLGSGASDICEDYIHYMCPDCGTECDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCIECKEFVAPNSIKTLRAHKFSHLPQPDWMRCKLCYQGFTEHYELVAHLLTKHHLNTLMTEKEQEVRPNATVGDDAEDNCGYDNGCDDESLLQFEDGPRRGSRISGDDMYETQIDYLCPQCGMEFIEKKHWRTHVVHMHGMNDLAKLNFEVVNDRQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHRIGYEPRKPGAGGMTASAGQSQIKPQTPRKQIVTVANETYEITYLDEEQSPPSNNNINEENDFGEQMQADDDDYAIGCSSTRQLPPADASTSASNPNANRYKCVDCGSLFASLAALKIHISEEHDFMDTQYSDKKCTDETALATTTETVTSPPKIFSGGSTIEQNYIFLCPSCGKPYKTQFEWRRHINEVHNFDKRQSLNMRQLDKYRYQCTQCKDIVSNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNICERGKPWRDMQPKPQNGSETTKYKDRDITDNPDKSDSPTPASSSSINSGRSLKQPVGLRPAGLNTLEDSISYHNAVDLDFITYFCPKCNKNFDSHAFWRKHIVEQHNLNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPFRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNKPLSEEDFNDDHRFAEQSEGAASVNESIDAASYRLLCPQCGENFSTSTKSLWSRHINIQHGLGKREALHIHKISEELYRCTDCDEQLPTKQLRALQEHRFRHLPYAAYIRCKLCEQQHPDDLGHGPVAGGVHSMLELQQHMREKHPAYAKSDQLMQVLVDADVNDDSHLSAVANNNEPSDSEPYIPMPVEMLLDGEGDKEMAAACNDSSGNGRYMPLPPHLMDDNVDETEFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01320714;
90% Identity: -
80% Identity: -