Smon011199.1
Basic Information
- Insect
- Scaptomyza montana
- Gene Symbol
- kn_1
- Assembly
- GCA_018904305.1
- Location
- JAEIGR010000008.1:2237757-2258538[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-179 2.2e-175 584.4 0.0 134 385 34 314 29 317 0.99 2 2 1.7e-06 0.016 13.6 17.8 425 541 320 435 315 439 0.62
Sequence Information
- Coding Sequence
- ATGCACATATGCATGATGACGTCACACAGCGGACGAAACGCACTCGTCCTTGACGCTGATTGTGGCAAGTGGCAGCATTCTGGCTGCCGCTGGGTGGATGAAGCCATCATCTATGAGGGCCAGGACAAGAATCCAGAGATGTGCCGTGTCCTTTTGACGCACGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGCTTTTTTCTCAAATTCTTTTTGAAGTGCAATCAAAATTGCTTGAAAAATGCTGGCAATCCGCGGGACATGCGAAGATTTCAGGTCGTCATATCCACCCAAGTGGCCGTTGATGGACCACTTTTAGCGATCTCGGATAATATGTTTGTGCATAATAATTCGAAGCATGGAAGACGCGCCAAACGCTTGGACACAACGGAAGGTACAGGCAATACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCTGTGGCGACACCCTGTATCAAAGCGATATCACCTAGCGAAGGCTGGACAACAGGTGGCGCCACCGTTATCATAGTAGGCGATAACTTCTTTGATGGCTTACAAGTGGTATTTGGCACAATGCTCGTGTGGAGCGAGCTAATAACATCACATGCGATAAGGGTGCAAACACCACCCAGACATATACCGGGTGTTGTTGAGGTAACGCTCTCCTATAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTAGATTCGTCTATGTCTCAGCACTCAATGAACCCACAATCGACTATGGCTTCCAGCGACTGCAGAAGCTCATACCACGACATCCCGGCGATCCCGAGAAACTGCAAAAGGAGATTATACTGAAACGTGCAGCGGATCTAGTTGAGGCACTCTACTCCATGCCCAGATCACCCGGCGGCTCGACCAGCTTCAACTCCTATGCGGGTCAATTGGCGGTGAGTGTACAAGACGGCTCTGGCCAGTGGACCGAGGATGATTATCAGCGTGCCCAGTCAAGCAGTGTTAGTCCACGTGGTGGCTATTGCAGCAGCGCCTCAACGCCCCACAGTTCGGGTGGTTCGTATGGGGCAACAGCAACAACCGCGAGCGTTGCAGCCACTTCAAATGGTTATGCGCCTGCACCGAATATGGGTACACTATCCTCATCGCCGGGTAGCGTCTTTAACTCAACATCAAGAGTCAGCAGCTTGAGCTTCAATCCCTTTGCCCTGCCCACCTGCAACACACAGGGCTATAGTACCAGTCAATTGGTGACATCAAGCAAATAA
- Protein Sequence
- MHICMMTSHSGRNALVLDADCGKWQHSGCRWVDEAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAATSNGYAPAPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGYSTSQLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187836;
- 90% Identity
- -
- 80% Identity
- -